Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G54800

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032889: regulation of vacuole fusion, non-autophagic0.00E+00
2GO:0010793: regulation of mRNA export from nucleus0.00E+00
3GO:0070291: N-acylethanolamine metabolic process0.00E+00
4GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
5GO:0035437: maintenance of protein localization in endoplasmic reticulum0.00E+00
6GO:0055071: manganese ion homeostasis1.97E-05
7GO:0046167: glycerol-3-phosphate biosynthetic process1.97E-05
8GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway1.97E-05
9GO:0000303: response to superoxide1.97E-05
10GO:0016197: endosomal transport5.10E-05
11GO:0034243: regulation of transcription elongation from RNA polymerase II promoter5.10E-05
12GO:0050684: regulation of mRNA processing5.10E-05
13GO:0050994: regulation of lipid catabolic process5.10E-05
14GO:0006641: triglyceride metabolic process5.10E-05
15GO:0035542: regulation of SNARE complex assembly5.10E-05
16GO:0019563: glycerol catabolic process9.05E-05
17GO:0032784: regulation of DNA-templated transcription, elongation9.05E-05
18GO:0032786: positive regulation of DNA-templated transcription, elongation9.05E-05
19GO:0006072: glycerol-3-phosphate metabolic process1.36E-04
20GO:0006809: nitric oxide biosynthetic process1.36E-04
21GO:0010188: response to microbial phytotoxin1.86E-04
22GO:0043097: pyrimidine nucleoside salvage2.40E-04
23GO:0006828: manganese ion transport2.97E-04
24GO:0006206: pyrimidine nucleobase metabolic process2.97E-04
25GO:0006401: RNA catabolic process4.19E-04
26GO:0090305: nucleic acid phosphodiester bond hydrolysis6.19E-04
27GO:0009688: abscisic acid biosynthetic process7.62E-04
28GO:0006325: chromatin organization7.62E-04
29GO:0009790: embryo development8.35E-04
30GO:0006816: calcium ion transport8.37E-04
31GO:0012501: programmed cell death9.12E-04
32GO:0010102: lateral root morphogenesis9.90E-04
33GO:0002237: response to molecule of bacterial origin1.07E-03
34GO:0007033: vacuole organization1.15E-03
35GO:2000377: regulation of reactive oxygen species metabolic process1.32E-03
36GO:0006825: copper ion transport1.41E-03
37GO:0009723: response to ethylene1.70E-03
38GO:0006886: intracellular protein transport2.24E-03
39GO:0009851: auxin biosynthetic process2.29E-03
40GO:0010183: pollen tube guidance2.29E-03
41GO:0071554: cell wall organization or biogenesis2.40E-03
42GO:0010193: response to ozone2.40E-03
43GO:0016032: viral process2.50E-03
44GO:0010029: regulation of seed germination3.19E-03
45GO:0009816: defense response to bacterium, incompatible interaction3.19E-03
46GO:0009873: ethylene-activated signaling pathway3.43E-03
47GO:0006499: N-terminal protein myristoylation3.93E-03
48GO:0006811: ion transport3.93E-03
49GO:0010119: regulation of stomatal movement4.06E-03
50GO:0009867: jasmonic acid mediated signaling pathway4.32E-03
51GO:0045087: innate immune response4.32E-03
52GO:0006897: endocytosis4.86E-03
53GO:0031347: regulation of defense response5.86E-03
54GO:0018105: peptidyl-serine phosphorylation8.22E-03
55GO:0009742: brassinosteroid mediated signaling pathway8.39E-03
56GO:0042742: defense response to bacterium9.51E-03
57GO:0009058: biosynthetic process9.78E-03
58GO:0009617: response to bacterium1.34E-02
59GO:0006970: response to osmotic stress1.70E-02
60GO:0080167: response to karrikin1.87E-02
61GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.92E-02
62GO:0016192: vesicle-mediated transport1.94E-02
63GO:0046777: protein autophosphorylation1.97E-02
64GO:0009737: response to abscisic acid2.03E-02
65GO:0016310: phosphorylation2.34E-02
66GO:0006397: mRNA processing2.55E-02
67GO:0048364: root development2.55E-02
68GO:0009611: response to wounding3.78E-02
69GO:0035556: intracellular signal transduction3.87E-02
70GO:0006511: ubiquitin-dependent protein catabolic process4.63E-02
71GO:0006414: translational elongation4.95E-02
RankGO TermAdjusted P value
1GO:0010293: abscisic aldehyde oxidase activity0.00E+00
2GO:0103073: anandamide amidohydrolase activity0.00E+00
3GO:0102077: oleamide hydrolase activity0.00E+00
4GO:0004370: glycerol kinase activity0.00E+00
5GO:0015410: manganese-transporting ATPase activity0.00E+00
6GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity0.00E+00
7GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.86E-05
8GO:0019200: carbohydrate kinase activity5.10E-05
9GO:0004383: guanylate cyclase activity9.05E-05
10GO:0019829: cation-transporting ATPase activity9.05E-05
11GO:0001653: peptide receptor activity1.36E-04
12GO:0004031: aldehyde oxidase activity1.86E-04
13GO:0050302: indole-3-acetaldehyde oxidase activity1.86E-04
14GO:0000993: RNA polymerase II core binding1.86E-04
15GO:0004040: amidase activity2.40E-04
16GO:0004849: uridine kinase activity3.57E-04
17GO:0003950: NAD+ ADP-ribosyltransferase activity3.57E-04
18GO:0004012: phospholipid-translocating ATPase activity3.57E-04
19GO:0005375: copper ion transmembrane transporter activity5.50E-04
20GO:0005388: calcium-transporting ATPase activity9.90E-04
21GO:0050660: flavin adenine dinucleotide binding1.70E-03
22GO:0003727: single-stranded RNA binding1.78E-03
23GO:0004518: nuclease activity2.50E-03
24GO:0009055: electron carrier activity2.86E-03
25GO:0016413: O-acetyltransferase activity2.95E-03
26GO:0009931: calcium-dependent protein serine/threonine kinase activity3.31E-03
27GO:0004683: calmodulin-dependent protein kinase activity3.43E-03
28GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.06E-03
29GO:0003746: translation elongation factor activity4.32E-03
30GO:0051537: 2 iron, 2 sulfur cluster binding5.42E-03
31GO:0031625: ubiquitin protein ligase binding6.76E-03
32GO:0005524: ATP binding6.80E-03
33GO:0005516: calmodulin binding7.06E-03
34GO:0003779: actin binding7.89E-03
35GO:0000287: magnesium ion binding1.59E-02
36GO:0003682: chromatin binding1.67E-02
37GO:0061630: ubiquitin protein ligase activity1.94E-02
38GO:0008289: lipid binding3.13E-02
39GO:0016887: ATPase activity3.38E-02
40GO:0004674: protein serine/threonine kinase activity4.69E-02
41GO:0005507: copper ion binding4.79E-02
RankGO TermAdjusted P value
1GO:0031902: late endosome membrane7.93E-06
2GO:0032044: DSIF complex1.97E-05
3GO:0005794: Golgi apparatus3.71E-05
4GO:0030897: HOPS complex5.10E-05
5GO:0005768: endosome1.48E-04
6GO:0016363: nuclear matrix3.57E-04
7GO:0030131: clathrin adaptor complex4.84E-04
8GO:0030125: clathrin vesicle coat7.62E-04
9GO:0005765: lysosomal membrane8.37E-04
10GO:0005802: trans-Golgi network1.03E-03
11GO:0043234: protein complex1.23E-03
12GO:0005905: clathrin-coated pit1.50E-03
13GO:0016021: integral component of membrane1.81E-03
14GO:0005788: endoplasmic reticulum lumen3.19E-03
15GO:0005783: endoplasmic reticulum3.54E-03
16GO:0000151: ubiquitin ligase complex3.68E-03
17GO:0015934: large ribosomal subunit4.06E-03
18GO:0010008: endosome membrane7.24E-03
19GO:0005834: heterotrimeric G-protein complex7.40E-03
20GO:0012505: endomembrane system7.89E-03
21GO:0005623: cell9.60E-03
22GO:0009705: plant-type vacuole membrane1.18E-02
23GO:0005789: endoplasmic reticulum membrane1.46E-02
24GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.72E-02
25GO:0005737: cytoplasm2.88E-02
26GO:0005886: plasma membrane3.67E-02
Gene type



Gene DE type