co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006792: regulation of sulfur utilization	0.00E+00
2	GO:1901485: positive regulation of transcription factor catabolic process	0.00E+00
3	GO:0042546: cell wall biogenesis	8.79E-06
4	GO:0071555: cell wall organization	3.44E-05
5	GO:0010411: xyloglucan metabolic process	3.88E-05
6	GO:0000271: polysaccharide biosynthetic process	1.58E-04
7	GO:0045489: pectin biosynthetic process	1.76E-04
8	GO:0045010: actin nucleation	2.06E-04
9	GO:0050691: regulation of defense response to virus by host	2.32E-04
10	GO:0033481: galacturonate biosynthetic process	2.32E-04
11	GO:0019354: siroheme biosynthetic process	2.32E-04
12	GO:0009962: regulation of flavonoid biosynthetic process	2.32E-04
13	GO:2000029: regulation of proanthocyanidin biosynthetic process	2.32E-04
14	GO:0010583: response to cyclopentenone	2.59E-04
15	GO:0010200: response to chitin	4.79E-04
16	GO:0000038: very long-chain fatty acid metabolic process	4.97E-04
17	GO:0007154: cell communication	5.15E-04
18	GO:0031542: positive regulation of anthocyanin biosynthetic process	5.15E-04
19	GO:0071497: cellular response to freezing	5.15E-04
20	GO:0009813: flavonoid biosynthetic process	5.83E-04
21	GO:0030036: actin cytoskeleton organization	6.45E-04
22	GO:0010581: regulation of starch biosynthetic process	8.37E-04
23	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.37E-04
24	GO:1902358: sulfate transmembrane transport	1.19E-03
25	GO:0032456: endocytic recycling	1.19E-03
26	GO:0051016: barbed-end actin filament capping	1.19E-03
27	GO:0031347: regulation of defense response	1.28E-03
28	GO:0040007: growth	1.42E-03
29	GO:0046345: abscisic acid catabolic process	1.59E-03
30	GO:0006749: glutathione metabolic process	1.59E-03
31	GO:2000762: regulation of phenylpropanoid metabolic process	2.03E-03
32	GO:0010438: cellular response to sulfur starvation	2.03E-03
33	GO:0080167: response to karrikin	2.22E-03
34	GO:0060918: auxin transport	2.50E-03
35	GO:1900425: negative regulation of defense response to bacterium	2.50E-03
36	GO:0007264: small GTPase mediated signal transduction	2.56E-03
37	GO:0009828: plant-type cell wall loosening	2.90E-03
38	GO:0009554: megasporogenesis	3.00E-03
39	GO:0010555: response to mannitol	3.00E-03
40	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.00E-03
41	GO:2000067: regulation of root morphogenesis	3.00E-03
42	GO:0006400: tRNA modification	3.54E-03
43	GO:0050829: defense response to Gram-negative bacterium	3.54E-03
44	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.65E-03
45	GO:0009751: response to salicylic acid	3.92E-03
46	GO:0010439: regulation of glucosinolate biosynthetic process	4.10E-03
47	GO:0052543: callose deposition in cell wall	4.10E-03
48	GO:0040008: regulation of growth	4.33E-03
49	GO:0007186: G-protein coupled receptor signaling pathway	4.70E-03
50	GO:0009056: catabolic process	5.32E-03
51	GO:0000902: cell morphogenesis	5.32E-03
52	GO:0051865: protein autoubiquitination	5.32E-03
53	GO:0016051: carbohydrate biosynthetic process	5.71E-03
54	GO:0009638: phototropism	5.97E-03
55	GO:0006779: porphyrin-containing compound biosynthetic process	5.97E-03
56	GO:0043069: negative regulation of programmed cell death	6.65E-03
57	GO:1903507: negative regulation of nucleic acid-templated transcription	7.35E-03
58	GO:0009750: response to fructose	7.35E-03
59	GO:0016925: protein sumoylation	8.08E-03
60	GO:0016024: CDP-diacylglycerol biosynthetic process	8.08E-03
61	GO:0009860: pollen tube growth	8.80E-03
62	GO:0018107: peptidyl-threonine phosphorylation	8.84E-03
63	GO:0009718: anthocyanin-containing compound biosynthetic process	8.84E-03
64	GO:0010540: basipetal auxin transport	9.62E-03
65	GO:0034605: cellular response to heat	9.62E-03
66	GO:0010143: cutin biosynthetic process	9.62E-03
67	GO:0002237: response to molecule of bacterial origin	9.62E-03
68	GO:0030154: cell differentiation	9.78E-03
69	GO:0006468: protein phosphorylation	1.02E-02
70	GO:0009969: xyloglucan biosynthetic process	1.04E-02
71	GO:0009225: nucleotide-sugar metabolic process	1.04E-02
72	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.10E-02
73	GO:0005992: trehalose biosynthetic process	1.21E-02
74	GO:0006487: protein N-linked glycosylation	1.21E-02
75	GO:0019953: sexual reproduction	1.30E-02
76	GO:0010026: trichome differentiation	1.30E-02
77	GO:0016998: cell wall macromolecule catabolic process	1.39E-02
78	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.48E-02
79	GO:0010017: red or far-red light signaling pathway	1.48E-02
80	GO:0009411: response to UV	1.57E-02
81	GO:0010214: seed coat development	1.67E-02
82	GO:0019722: calcium-mediated signaling	1.67E-02
83	GO:0010087: phloem or xylem histogenesis	1.87E-02
84	GO:0048653: anther development	1.87E-02
85	GO:0000226: microtubule cytoskeleton organization	1.87E-02
86	GO:0042335: cuticle development	1.87E-02
87	GO:0009753: response to jasmonic acid	1.89E-02
88	GO:0009741: response to brassinosteroid	1.97E-02
89	GO:0010268: brassinosteroid homeostasis	1.97E-02
90	GO:0009958: positive gravitropism	1.97E-02
91	GO:0009749: response to glucose	2.18E-02
92	GO:0006633: fatty acid biosynthetic process	2.23E-02
93	GO:0016132: brassinosteroid biosynthetic process	2.29E-02
94	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.29E-02
95	GO:0002229: defense response to oomycetes	2.29E-02
96	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.46E-02
97	GO:0010090: trichome morphogenesis	2.51E-02
98	GO:0009639: response to red or far red light	2.62E-02
99	GO:0016125: sterol metabolic process	2.62E-02
100	GO:0019760: glucosinolate metabolic process	2.62E-02
101	GO:0007267: cell-cell signaling	2.74E-02
102	GO:0001666: response to hypoxia	2.98E-02
103	GO:0016126: sterol biosynthetic process	2.98E-02
104	GO:0016311: dephosphorylation	3.47E-02
105	GO:0009826: unidimensional cell growth	3.65E-02
106	GO:0048767: root hair elongation	3.72E-02
107	GO:0009407: toxin catabolic process	3.85E-02
108	GO:0010218: response to far red light	3.85E-02
109	GO:0010119: regulation of stomatal movement	3.98E-02
110	GO:0007568: aging	3.98E-02
111	GO:0048527: lateral root development	3.98E-02
112	GO:0007049: cell cycle	4.23E-02
113	GO:0009637: response to blue light	4.25E-02
114	GO:0009867: jasmonic acid mediated signaling pathway	4.25E-02
115	GO:0009723: response to ethylene	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0047890: flavanone 4-reductase activity	0.00E+00
2	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
3	GO:0004851: uroporphyrin-III C-methyltransferase activity	0.00E+00
4	GO:0045552: dihydrokaempferol 4-reductase activity	0.00E+00
5	GO:0003838: sterol 24-C-methyltransferase activity	2.32E-04
6	GO:0080132: fatty acid alpha-hydroxylase activity	2.32E-04
7	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.37E-04
8	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.81E-04
9	GO:0048531: beta-1,3-galactosyltransferase activity	5.15E-04
10	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.37E-04
11	GO:0001664: G-protein coupled receptor binding	8.37E-04
12	GO:0031683: G-protein beta/gamma-subunit complex binding	8.37E-04
13	GO:0003924: GTPase activity	8.99E-04
14	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.19E-03
15	GO:0001872: (1->3)-beta-D-glucan binding	1.19E-03
16	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.19E-03
17	GO:0016757: transferase activity, transferring glycosyl groups	1.26E-03
18	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.31E-03
19	GO:0045430: chalcone isomerase activity	1.59E-03
20	GO:0050378: UDP-glucuronate 4-epimerase activity	1.59E-03
21	GO:0031386: protein tag	2.03E-03
22	GO:0002020: protease binding	2.03E-03
23	GO:0019901: protein kinase binding	2.24E-03
24	GO:0044212: transcription regulatory region DNA binding	2.46E-03
25	GO:0035252: UDP-xylosyltransferase activity	2.50E-03
26	GO:0010427: abscisic acid binding	2.50E-03
27	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.50E-03
28	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.50E-03
29	GO:0016759: cellulose synthase activity	2.90E-03
30	GO:0016758: transferase activity, transferring hexosyl groups	2.95E-03
31	GO:0019900: kinase binding	3.00E-03
32	GO:0016621: cinnamoyl-CoA reductase activity	3.54E-03
33	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.99E-03
34	GO:0030247: polysaccharide binding	4.07E-03
35	GO:0008271: secondary active sulfate transmembrane transporter activity	4.70E-03
36	GO:0005525: GTP binding	5.87E-03
37	GO:0004805: trehalose-phosphatase activity	6.65E-03
38	GO:0004864: protein phosphatase inhibitor activity	6.65E-03
39	GO:0000976: transcription regulatory region sequence-specific DNA binding	8.08E-03
40	GO:0015116: sulfate transmembrane transporter activity	8.08E-03
41	GO:0004674: protein serine/threonine kinase activity	8.59E-03
42	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.62E-03
43	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.13E-02
44	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.13E-02
45	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.13E-02
46	GO:0052689: carboxylic ester hydrolase activity	1.20E-02
47	GO:0008134: transcription factor binding	1.21E-02
48	GO:0003714: transcription corepressor activity	1.21E-02
49	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.32E-02
50	GO:0046983: protein dimerization activity	1.39E-02
51	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.52E-02
52	GO:0050662: coenzyme binding	2.07E-02
53	GO:0004872: receptor activity	2.18E-02
54	GO:0043565: sequence-specific DNA binding	2.34E-02
55	GO:0051015: actin filament binding	2.51E-02
56	GO:0016791: phosphatase activity	2.62E-02
57	GO:0005200: structural constituent of cytoskeleton	2.74E-02
58	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.74E-02
59	GO:0008375: acetylglucosaminyltransferase activity	3.22E-02
60	GO:0004806: triglyceride lipase activity	3.34E-02
61	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	3.85E-02
62	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
63	GO:0004672: protein kinase activity	4.80E-02
64	GO:0004364: glutathione transferase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0031225: anchored component of membrane	1.75E-07
3	GO:0009505: plant-type cell wall	1.89E-06
4	GO:0005794: Golgi apparatus	4.03E-05
5	GO:0005886: plasma membrane	1.01E-04
6	GO:0046658: anchored component of plasma membrane	2.24E-04
7	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.37E-04
8	GO:0035619: root hair tip	1.19E-03
9	GO:0000139: Golgi membrane	1.35E-03
10	GO:0009506: plasmodesma	1.48E-03
11	GO:0031209: SCAR complex	2.50E-03
12	GO:0032588: trans-Golgi network membrane	2.50E-03
13	GO:0005618: cell wall	5.18E-03
14	GO:0005615: extracellular space	5.30E-03
15	GO:0031901: early endosome membrane	5.32E-03
16	GO:0005856: cytoskeleton	8.27E-03
17	GO:0016021: integral component of membrane	1.14E-02
18	GO:0048046: apoplast	1.15E-02
19	GO:0005576: extracellular region	1.69E-02
20	GO:0005802: trans-Golgi network	1.95E-02
21	GO:0005768: endosome	2.36E-02
22	GO:0032580: Golgi cisterna membrane	2.62E-02
23	GO:0000786: nucleosome	4.12E-02