co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G54180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006782: protoporphyrinogen IX biosynthetic process	8.47E-06
2	GO:0006568: tryptophan metabolic process	4.35E-05
3	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	7.77E-05
4	GO:0033014: tetrapyrrole biosynthetic process	1.17E-04
5	GO:0006986: response to unfolded protein	1.17E-04
6	GO:0051085: chaperone mediated protein folding requiring cofactor	1.17E-04
7	GO:0006241: CTP biosynthetic process	1.17E-04
8	GO:0006165: nucleoside diphosphate phosphorylation	1.17E-04
9	GO:0006228: UTP biosynthetic process	1.17E-04
10	GO:0015995: chlorophyll biosynthetic process	1.33E-04
11	GO:0006021: inositol biosynthetic process	1.61E-04
12	GO:0006183: GTP biosynthetic process	1.61E-04
13	GO:0045038: protein import into chloroplast thylakoid membrane	2.09E-04
14	GO:0007094: mitotic spindle assembly checkpoint	2.09E-04
15	GO:0048437: floral organ development	3.66E-04
16	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.66E-04
17	GO:0006826: iron ion transport	3.66E-04
18	GO:0000105: histidine biosynthetic process	4.23E-04
19	GO:0032544: plastid translation	4.82E-04
20	GO:0006779: porphyrin-containing compound biosynthetic process	6.04E-04
21	GO:0009073: aromatic amino acid family biosynthetic process	7.34E-04
22	GO:0006790: sulfur compound metabolic process	8.01E-04
23	GO:0010075: regulation of meristem growth	8.70E-04
24	GO:0010039: response to iron ion	1.01E-03
25	GO:0046854: phosphatidylinositol phosphorylation	1.01E-03
26	GO:0051321: meiotic cell cycle	1.31E-03
27	GO:0009411: response to UV	1.47E-03
28	GO:0007059: chromosome segregation	1.91E-03
29	GO:0006839: mitochondrial transport	4.11E-03
30	GO:0042542: response to hydrogen peroxide	4.35E-03
31	GO:0006457: protein folding	4.95E-03
32	GO:0009585: red, far-red light phototransduction	5.48E-03
33	GO:0009790: embryo development	9.10E-03
34	GO:0009451: RNA modification	1.04E-02
35	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.66E-02
36	GO:0032259: methylation	2.07E-02
37	GO:0008152: metabolic process	2.29E-02
38	GO:0006508: proteolysis	2.39E-02
39	GO:0009734: auxin-activated signaling pathway	2.73E-02
40	GO:0009735: response to cytokinin	3.02E-02
41	GO:0051301: cell division	3.42E-02
42	GO:0006412: translation	4.04E-02
43	GO:0006414: translational elongation	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0005048: signal sequence binding	0.00E+00
3	GO:0004401: histidinol-phosphatase activity	0.00E+00
4	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.67E-05
5	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.67E-05
6	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.67E-05
7	GO:0004176: ATP-dependent peptidase activity	3.20E-05
8	GO:0052832: inositol monophosphate 3-phosphatase activity	4.35E-05
9	GO:0004109: coproporphyrinogen oxidase activity	4.35E-05
10	GO:0008934: inositol monophosphate 1-phosphatase activity	4.35E-05
11	GO:0052833: inositol monophosphate 4-phosphatase activity	4.35E-05
12	GO:0008237: metallopeptidase activity	9.77E-05
13	GO:0004550: nucleoside diphosphate kinase activity	1.17E-04
14	GO:0016851: magnesium chelatase activity	1.17E-04
15	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.11E-04
16	GO:0016831: carboxy-lyase activity	3.66E-04
17	GO:0008312: 7S RNA binding	4.23E-04
18	GO:0051087: chaperone binding	1.23E-03
19	GO:0008483: transaminase activity	2.48E-03
20	GO:0004222: metalloendopeptidase activity	3.42E-03
21	GO:0003746: translation elongation factor activity	3.76E-03
22	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.96E-03
23	GO:0005525: GTP binding	6.28E-03
24	GO:0080043: quercetin 3-O-glucosyltransferase activity	6.56E-03
25	GO:0080044: quercetin 7-O-glucosyltransferase activity	6.56E-03
26	GO:0022857: transmembrane transporter activity	6.70E-03
27	GO:0051082: unfolded protein binding	6.99E-03
28	GO:0019843: rRNA binding	8.17E-03
29	GO:0030170: pyridoxal phosphate binding	8.79E-03
30	GO:0008194: UDP-glycosyltransferase activity	1.11E-02
31	GO:0008168: methyltransferase activity	1.36E-02
32	GO:0000287: magnesium ion binding	1.37E-02
33	GO:0004601: peroxidase activity	1.39E-02
34	GO:0003735: structural constituent of ribosome	1.54E-02
35	GO:0003924: GTPase activity	2.14E-02
36	GO:0004519: endonuclease activity	2.27E-02
37	GO:0016887: ATPase activity	2.92E-02
38	GO:0000166: nucleotide binding	3.22E-02
39	GO:0030246: carbohydrate binding	3.98E-02
40	GO:0005507: copper ion binding	4.14E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	6.03E-14
2	GO:0009570: chloroplast stroma	1.66E-12
3	GO:0009941: chloroplast envelope	2.34E-10
4	GO:0080085: signal recognition particle, chloroplast targeting	4.35E-05
5	GO:0005828: kinetochore microtubule	1.61E-04
6	GO:0009536: plastid	1.75E-04
7	GO:0000776: kinetochore	2.09E-04
8	GO:0000777: condensed chromosome kinetochore	3.11E-04
9	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.82E-04
10	GO:0009579: thylakoid	5.52E-04
11	GO:0009534: chloroplast thylakoid	5.59E-04
12	GO:0005876: spindle microtubule	6.04E-04
13	GO:0000312: plastid small ribosomal subunit	9.39E-04
14	GO:0009706: chloroplast inner membrane	6.99E-03
15	GO:0010287: plastoglobule	7.87E-03
16	GO:0009543: chloroplast thylakoid lumen	8.17E-03
17	GO:0009524: phragmoplast	8.47E-03
18	GO:0005759: mitochondrial matrix	9.58E-03
19	GO:0022627: cytosolic small ribosomal subunit	1.25E-02
20	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.49E-02
21	GO:0031969: chloroplast membrane	1.62E-02
22	GO:0022625: cytosolic large ribosomal subunit	1.68E-02
23	GO:0005743: mitochondrial inner membrane	2.03E-02
24	GO:0043231: intracellular membrane-bounded organelle	2.29E-02
25	GO:0048046: apoplast	2.83E-02