GO Enrichment Analysis of Co-expressed Genes with
AT5G53580
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
4 | GO:0006066: alcohol metabolic process | 0.00E+00 |
5 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
6 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
7 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
8 | GO:0015979: photosynthesis | 1.03E-15 |
9 | GO:0009773: photosynthetic electron transport in photosystem I | 3.69E-09 |
10 | GO:0010027: thylakoid membrane organization | 3.31E-08 |
11 | GO:0009658: chloroplast organization | 3.06E-07 |
12 | GO:0009735: response to cytokinin | 1.93E-06 |
13 | GO:0006810: transport | 4.84E-06 |
14 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.19E-05 |
15 | GO:0018298: protein-chromophore linkage | 5.14E-05 |
16 | GO:0010190: cytochrome b6f complex assembly | 9.33E-05 |
17 | GO:0010196: nonphotochemical quenching | 1.69E-04 |
18 | GO:0006400: tRNA modification | 1.69E-04 |
19 | GO:0043686: co-translational protein modification | 2.39E-04 |
20 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.39E-04 |
21 | GO:0051180: vitamin transport | 2.39E-04 |
22 | GO:0030974: thiamine pyrophosphate transport | 2.39E-04 |
23 | GO:0071277: cellular response to calcium ion | 2.39E-04 |
24 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.39E-04 |
25 | GO:1904964: positive regulation of phytol biosynthetic process | 2.39E-04 |
26 | GO:0032544: plastid translation | 2.67E-04 |
27 | GO:0010206: photosystem II repair | 3.23E-04 |
28 | GO:0010205: photoinhibition | 3.83E-04 |
29 | GO:0043085: positive regulation of catalytic activity | 5.19E-04 |
30 | GO:0006729: tetrahydrobiopterin biosynthetic process | 5.29E-04 |
31 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.29E-04 |
32 | GO:0010024: phytochromobilin biosynthetic process | 5.29E-04 |
33 | GO:0043039: tRNA aminoacylation | 5.29E-04 |
34 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.29E-04 |
35 | GO:2000030: regulation of response to red or far red light | 5.29E-04 |
36 | GO:0015893: drug transport | 5.29E-04 |
37 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.29E-04 |
38 | GO:0042744: hydrogen peroxide catabolic process | 6.61E-04 |
39 | GO:0045454: cell redox homeostasis | 6.71E-04 |
40 | GO:0019253: reductive pentose-phosphate cycle | 7.56E-04 |
41 | GO:0006000: fructose metabolic process | 8.60E-04 |
42 | GO:0010581: regulation of starch biosynthetic process | 8.60E-04 |
43 | GO:0006788: heme oxidation | 8.60E-04 |
44 | GO:0006753: nucleoside phosphate metabolic process | 8.60E-04 |
45 | GO:0071492: cellular response to UV-A | 8.60E-04 |
46 | GO:0006839: mitochondrial transport | 9.16E-04 |
47 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.14E-03 |
48 | GO:0009644: response to high light intensity | 1.17E-03 |
49 | GO:0055070: copper ion homeostasis | 1.23E-03 |
50 | GO:0006020: inositol metabolic process | 1.23E-03 |
51 | GO:0009152: purine ribonucleotide biosynthetic process | 1.23E-03 |
52 | GO:0046653: tetrahydrofolate metabolic process | 1.23E-03 |
53 | GO:0055114: oxidation-reduction process | 1.40E-03 |
54 | GO:0009793: embryo development ending in seed dormancy | 1.60E-03 |
55 | GO:0010037: response to carbon dioxide | 1.64E-03 |
56 | GO:0015976: carbon utilization | 1.64E-03 |
57 | GO:0071486: cellular response to high light intensity | 1.64E-03 |
58 | GO:0045727: positive regulation of translation | 1.64E-03 |
59 | GO:0015994: chlorophyll metabolic process | 1.64E-03 |
60 | GO:2000122: negative regulation of stomatal complex development | 1.64E-03 |
61 | GO:0031122: cytoplasmic microtubule organization | 1.64E-03 |
62 | GO:0006021: inositol biosynthetic process | 1.64E-03 |
63 | GO:0031365: N-terminal protein amino acid modification | 2.09E-03 |
64 | GO:0035434: copper ion transmembrane transport | 2.09E-03 |
65 | GO:0006461: protein complex assembly | 2.09E-03 |
66 | GO:0080110: sporopollenin biosynthetic process | 2.09E-03 |
67 | GO:0006564: L-serine biosynthetic process | 2.09E-03 |
68 | GO:0010236: plastoquinone biosynthetic process | 2.09E-03 |
69 | GO:0006561: proline biosynthetic process | 2.57E-03 |
70 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.57E-03 |
71 | GO:0042549: photosystem II stabilization | 2.57E-03 |
72 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.57E-03 |
73 | GO:0016554: cytidine to uridine editing | 2.57E-03 |
74 | GO:0046855: inositol phosphate dephosphorylation | 2.57E-03 |
75 | GO:0019760: glucosinolate metabolic process | 3.03E-03 |
76 | GO:0010019: chloroplast-nucleus signaling pathway | 3.09E-03 |
77 | GO:0010189: vitamin E biosynthetic process | 3.09E-03 |
78 | GO:0009395: phospholipid catabolic process | 3.64E-03 |
79 | GO:0015937: coenzyme A biosynthetic process | 3.64E-03 |
80 | GO:0009645: response to low light intensity stimulus | 3.64E-03 |
81 | GO:0032259: methylation | 4.01E-03 |
82 | GO:0055085: transmembrane transport | 4.02E-03 |
83 | GO:0048564: photosystem I assembly | 4.23E-03 |
84 | GO:0030091: protein repair | 4.23E-03 |
85 | GO:0006605: protein targeting | 4.23E-03 |
86 | GO:0009704: de-etiolation | 4.23E-03 |
87 | GO:0017004: cytochrome complex assembly | 4.84E-03 |
88 | GO:0006002: fructose 6-phosphate metabolic process | 4.84E-03 |
89 | GO:0019430: removal of superoxide radicals | 4.84E-03 |
90 | GO:0009657: plastid organization | 4.84E-03 |
91 | GO:0000373: Group II intron splicing | 5.48E-03 |
92 | GO:0090333: regulation of stomatal closure | 5.48E-03 |
93 | GO:1900865: chloroplast RNA modification | 6.15E-03 |
94 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.15E-03 |
95 | GO:0034599: cellular response to oxidative stress | 6.23E-03 |
96 | GO:0009688: abscisic acid biosynthetic process | 6.85E-03 |
97 | GO:0019538: protein metabolic process | 6.85E-03 |
98 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.58E-03 |
99 | GO:0006415: translational termination | 7.58E-03 |
100 | GO:0009073: aromatic amino acid family biosynthetic process | 7.58E-03 |
101 | GO:0009750: response to fructose | 7.58E-03 |
102 | GO:0006790: sulfur compound metabolic process | 8.33E-03 |
103 | GO:0006094: gluconeogenesis | 9.11E-03 |
104 | GO:0009767: photosynthetic electron transport chain | 9.11E-03 |
105 | GO:0005986: sucrose biosynthetic process | 9.11E-03 |
106 | GO:0010628: positive regulation of gene expression | 9.11E-03 |
107 | GO:0010143: cutin biosynthetic process | 9.92E-03 |
108 | GO:0010207: photosystem II assembly | 9.92E-03 |
109 | GO:0006364: rRNA processing | 1.04E-02 |
110 | GO:0046854: phosphatidylinositol phosphorylation | 1.07E-02 |
111 | GO:0005985: sucrose metabolic process | 1.07E-02 |
112 | GO:0019762: glucosinolate catabolic process | 1.16E-02 |
113 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.16E-02 |
114 | GO:0006487: protein N-linked glycosylation | 1.25E-02 |
115 | GO:0006418: tRNA aminoacylation for protein translation | 1.34E-02 |
116 | GO:0016998: cell wall macromolecule catabolic process | 1.43E-02 |
117 | GO:0061077: chaperone-mediated protein folding | 1.43E-02 |
118 | GO:0031408: oxylipin biosynthetic process | 1.43E-02 |
119 | GO:0009409: response to cold | 1.53E-02 |
120 | GO:0010584: pollen exine formation | 1.72E-02 |
121 | GO:0009561: megagametogenesis | 1.72E-02 |
122 | GO:0009306: protein secretion | 1.72E-02 |
123 | GO:0010182: sugar mediated signaling pathway | 2.03E-02 |
124 | GO:0006662: glycerol ether metabolic process | 2.03E-02 |
125 | GO:0008152: metabolic process | 2.06E-02 |
126 | GO:0048544: recognition of pollen | 2.14E-02 |
127 | GO:0009791: post-embryonic development | 2.25E-02 |
128 | GO:0006508: proteolysis | 2.36E-02 |
129 | GO:0000302: response to reactive oxygen species | 2.36E-02 |
130 | GO:0040008: regulation of growth | 2.45E-02 |
131 | GO:0030163: protein catabolic process | 2.59E-02 |
132 | GO:0042742: defense response to bacterium | 2.93E-02 |
133 | GO:0006979: response to oxidative stress | 2.97E-02 |
134 | GO:0042128: nitrate assimilation | 3.32E-02 |
135 | GO:0015995: chlorophyll biosynthetic process | 3.45E-02 |
136 | GO:0010411: xyloglucan metabolic process | 3.45E-02 |
137 | GO:0016311: dephosphorylation | 3.58E-02 |
138 | GO:0009738: abscisic acid-activated signaling pathway | 3.58E-02 |
139 | GO:0009817: defense response to fungus, incompatible interaction | 3.71E-02 |
140 | GO:0009416: response to light stimulus | 3.73E-02 |
141 | GO:0000160: phosphorelay signal transduction system | 3.84E-02 |
142 | GO:0009407: toxin catabolic process | 3.97E-02 |
143 | GO:0010218: response to far red light | 3.97E-02 |
144 | GO:0042254: ribosome biogenesis | 4.03E-02 |
145 | GO:0009631: cold acclimation | 4.11E-02 |
146 | GO:0010119: regulation of stomatal movement | 4.11E-02 |
147 | GO:0009637: response to blue light | 4.39E-02 |
148 | GO:0009853: photorespiration | 4.39E-02 |
149 | GO:0030001: metal ion transport | 4.81E-02 |
150 | GO:0080167: response to karrikin | 4.89E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
2 | GO:0051738: xanthophyll binding | 0.00E+00 |
3 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
4 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
5 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
6 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
7 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
8 | GO:0016168: chlorophyll binding | 3.98E-08 |
9 | GO:0022891: substrate-specific transmembrane transporter activity | 4.50E-06 |
10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.99E-05 |
11 | GO:0046872: metal ion binding | 1.21E-04 |
12 | GO:0051920: peroxiredoxin activity | 1.29E-04 |
13 | GO:0019899: enzyme binding | 1.69E-04 |
14 | GO:0016209: antioxidant activity | 2.16E-04 |
15 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.39E-04 |
16 | GO:0004560: alpha-L-fucosidase activity | 2.39E-04 |
17 | GO:0090422: thiamine pyrophosphate transporter activity | 2.39E-04 |
18 | GO:0004831: tyrosine-tRNA ligase activity | 2.39E-04 |
19 | GO:0010945: CoA pyrophosphatase activity | 2.39E-04 |
20 | GO:0042586: peptide deformylase activity | 2.39E-04 |
21 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 2.39E-04 |
22 | GO:0008568: microtubule-severing ATPase activity | 2.39E-04 |
23 | GO:0008047: enzyme activator activity | 4.48E-04 |
24 | GO:0047746: chlorophyllase activity | 5.29E-04 |
25 | GO:0004618: phosphoglycerate kinase activity | 5.29E-04 |
26 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.29E-04 |
27 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.29E-04 |
28 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.29E-04 |
29 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.29E-04 |
30 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.29E-04 |
31 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.29E-04 |
32 | GO:0018708: thiol S-methyltransferase activity | 5.29E-04 |
33 | GO:0016630: protochlorophyllide reductase activity | 5.29E-04 |
34 | GO:0008967: phosphoglycolate phosphatase activity | 5.29E-04 |
35 | GO:0019843: rRNA binding | 5.42E-04 |
36 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.60E-04 |
37 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.60E-04 |
38 | GO:0016531: copper chaperone activity | 8.60E-04 |
39 | GO:0019829: cation-transporting ATPase activity | 8.60E-04 |
40 | GO:0050734: hydroxycinnamoyltransferase activity | 8.60E-04 |
41 | GO:0031409: pigment binding | 9.38E-04 |
42 | GO:0005528: FK506 binding | 1.04E-03 |
43 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.23E-03 |
44 | GO:0016149: translation release factor activity, codon specific | 1.23E-03 |
45 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.23E-03 |
46 | GO:0008168: methyltransferase activity | 1.61E-03 |
47 | GO:0004659: prenyltransferase activity | 1.64E-03 |
48 | GO:0043495: protein anchor | 1.64E-03 |
49 | GO:0004392: heme oxygenase (decyclizing) activity | 1.64E-03 |
50 | GO:0004601: peroxidase activity | 1.70E-03 |
51 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.09E-03 |
52 | GO:0003959: NADPH dehydrogenase activity | 2.09E-03 |
53 | GO:0004791: thioredoxin-disulfide reductase activity | 2.18E-03 |
54 | GO:0050662: coenzyme binding | 2.18E-03 |
55 | GO:0048038: quinone binding | 2.50E-03 |
56 | GO:0004130: cytochrome-c peroxidase activity | 2.57E-03 |
57 | GO:0000210: NAD+ diphosphatase activity | 2.57E-03 |
58 | GO:0016688: L-ascorbate peroxidase activity | 2.57E-03 |
59 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.85E-03 |
60 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.09E-03 |
61 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.09E-03 |
62 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.09E-03 |
63 | GO:0004033: aldo-keto reductase (NADP) activity | 4.23E-03 |
64 | GO:0016491: oxidoreductase activity | 4.61E-03 |
65 | GO:0008135: translation factor activity, RNA binding | 4.84E-03 |
66 | GO:0005375: copper ion transmembrane transporter activity | 4.84E-03 |
67 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.84E-03 |
68 | GO:0004222: metalloendopeptidase activity | 5.18E-03 |
69 | GO:0003747: translation release factor activity | 5.48E-03 |
70 | GO:0003746: translation elongation factor activity | 5.96E-03 |
71 | GO:0003993: acid phosphatase activity | 6.23E-03 |
72 | GO:0030234: enzyme regulator activity | 6.85E-03 |
73 | GO:0015386: potassium:proton antiporter activity | 7.58E-03 |
74 | GO:0016788: hydrolase activity, acting on ester bonds | 8.66E-03 |
75 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.97E-03 |
76 | GO:0004089: carbonate dehydratase activity | 9.11E-03 |
77 | GO:0031072: heat shock protein binding | 9.11E-03 |
78 | GO:0004565: beta-galactosidase activity | 9.11E-03 |
79 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 9.11E-03 |
80 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.11E-03 |
81 | GO:0008266: poly(U) RNA binding | 9.92E-03 |
82 | GO:0003723: RNA binding | 1.17E-02 |
83 | GO:0043424: protein histidine kinase binding | 1.34E-02 |
84 | GO:0015079: potassium ion transmembrane transporter activity | 1.34E-02 |
85 | GO:0004176: ATP-dependent peptidase activity | 1.43E-02 |
86 | GO:0047134: protein-disulfide reductase activity | 1.82E-02 |
87 | GO:0004812: aminoacyl-tRNA ligase activity | 1.82E-02 |
88 | GO:0009055: electron carrier activity | 1.99E-02 |
89 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.36E-02 |
90 | GO:0000156: phosphorelay response regulator activity | 2.59E-02 |
91 | GO:0016759: cellulose synthase activity | 2.71E-02 |
92 | GO:0008237: metallopeptidase activity | 2.83E-02 |
93 | GO:0044212: transcription regulatory region DNA binding | 2.93E-02 |
94 | GO:0016597: amino acid binding | 2.95E-02 |
95 | GO:0008375: acetylglucosaminyltransferase activity | 3.32E-02 |
96 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.32E-02 |
97 | GO:0016787: hydrolase activity | 3.33E-02 |
98 | GO:0004683: calmodulin-dependent protein kinase activity | 3.45E-02 |
99 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.45E-02 |
100 | GO:0008236: serine-type peptidase activity | 3.58E-02 |
101 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.58E-02 |
102 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.71E-02 |
103 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.11E-02 |
104 | GO:0050660: flavin adenine dinucleotide binding | 4.57E-02 |
105 | GO:0051539: 4 iron, 4 sulfur cluster binding | 4.81E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009575: chromoplast stroma | 0.00E+00 |
2 | GO:0009507: chloroplast | 3.99E-50 |
3 | GO:0009535: chloroplast thylakoid membrane | 1.07E-34 |
4 | GO:0009570: chloroplast stroma | 6.53E-17 |
5 | GO:0009941: chloroplast envelope | 1.42E-16 |
6 | GO:0009579: thylakoid | 9.56E-14 |
7 | GO:0009534: chloroplast thylakoid | 1.03E-13 |
8 | GO:0009523: photosystem II | 7.63E-09 |
9 | GO:0009543: chloroplast thylakoid lumen | 1.45E-08 |
10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-07 |
11 | GO:0031969: chloroplast membrane | 8.76E-06 |
12 | GO:0010319: stromule | 2.41E-05 |
13 | GO:0048046: apoplast | 4.97E-05 |
14 | GO:0042651: thylakoid membrane | 7.83E-05 |
15 | GO:0009533: chloroplast stromal thylakoid | 1.69E-04 |
16 | GO:0009782: photosystem I antenna complex | 2.39E-04 |
17 | GO:0009706: chloroplast inner membrane | 3.82E-04 |
18 | GO:0010287: plastoglobule | 4.99E-04 |
19 | GO:0030095: chloroplast photosystem II | 7.56E-04 |
20 | GO:0030076: light-harvesting complex | 8.45E-04 |
21 | GO:0005853: eukaryotic translation elongation factor 1 complex | 8.60E-04 |
22 | GO:0031977: thylakoid lumen | 9.64E-04 |
23 | GO:0009654: photosystem II oxygen evolving complex | 1.14E-03 |
24 | GO:0009517: PSII associated light-harvesting complex II | 1.64E-03 |
25 | GO:0016021: integral component of membrane | 2.32E-03 |
26 | GO:0019898: extrinsic component of membrane | 2.34E-03 |
27 | GO:0009536: plastid | 4.01E-03 |
28 | GO:0015935: small ribosomal subunit | 1.43E-02 |
29 | GO:0005618: cell wall | 1.51E-02 |
30 | GO:0005743: mitochondrial inner membrane | 1.66E-02 |
31 | GO:0009522: photosystem I | 2.14E-02 |
32 | GO:0005778: peroxisomal membrane | 2.83E-02 |
33 | GO:0030529: intracellular ribonucleoprotein complex | 3.07E-02 |
34 | GO:0009505: plant-type cell wall | 4.07E-02 |
35 | GO:0015934: large ribosomal subunit | 4.11E-02 |