Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G53480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035420: MAPK cascade involved in innate immune response0.00E+00
2GO:2000026: regulation of multicellular organismal development0.00E+00
3GO:0090352: regulation of nitrate assimilation0.00E+00
4GO:1903288: positive regulation of potassium ion import0.00E+00
5GO:0010247: detection of phosphate ion0.00E+00
6GO:0016049: cell growth8.83E-07
7GO:0048589: developmental growth2.61E-06
8GO:0016573: histone acetylation3.28E-06
9GO:0008361: regulation of cell size5.89E-06
10GO:0010113: negative regulation of systemic acquired resistance1.04E-05
11GO:1902459: positive regulation of stem cell population maintenance1.04E-05
12GO:0071902: positive regulation of protein serine/threonine kinase activity1.04E-05
13GO:2000071: regulation of defense response by callose deposition2.78E-05
14GO:0016197: endosomal transport2.78E-05
15GO:0032940: secretion by cell5.03E-05
16GO:0009405: pathogenesis5.03E-05
17GO:0006473: protein acetylation5.03E-05
18GO:0010506: regulation of autophagy5.03E-05
19GO:0032012: regulation of ARF protein signal transduction5.03E-05
20GO:0071230: cellular response to amino acid stimulus5.03E-05
21GO:0031929: TOR signaling5.03E-05
22GO:0046777: protein autophosphorylation5.59E-05
23GO:0080119: ER body organization7.70E-05
24GO:0071323: cellular response to chitin7.70E-05
25GO:0048481: plant ovule development7.90E-05
26GO:0045723: positive regulation of fatty acid biosynthetic process1.07E-04
27GO:0045324: late endosome to vacuole transport1.07E-04
28GO:0007029: endoplasmic reticulum organization1.40E-04
29GO:0032876: negative regulation of DNA endoreduplication1.40E-04
30GO:0048232: male gamete generation1.74E-04
31GO:0009267: cellular response to starvation1.74E-04
32GO:0010337: regulation of salicylic acid metabolic process1.74E-04
33GO:0009861: jasmonic acid and ethylene-dependent systemic resistance2.11E-04
34GO:0010047: fruit dehiscence2.50E-04
35GO:0030307: positive regulation of cell growth2.50E-04
36GO:0009787: regulation of abscisic acid-activated signaling pathway2.90E-04
37GO:1900150: regulation of defense response to fungus2.90E-04
38GO:2000070: regulation of response to water deprivation2.90E-04
39GO:0009870: defense response signaling pathway, resistance gene-dependent4.63E-04
40GO:0008285: negative regulation of cell proliferation5.09E-04
41GO:0010105: negative regulation of ethylene-activated signaling pathway5.55E-04
42GO:0016925: protein sumoylation5.55E-04
43GO:0050826: response to freezing6.04E-04
44GO:0007030: Golgi organization7.02E-04
45GO:0042023: DNA endoreduplication7.53E-04
46GO:0016575: histone deacetylation8.59E-04
47GO:0006366: transcription from RNA polymerase II promoter9.11E-04
48GO:0010227: floral organ abscission1.02E-03
49GO:0009294: DNA mediated transformation1.02E-03
50GO:0045892: negative regulation of transcription, DNA-templated1.04E-03
51GO:0009561: megagametogenesis1.08E-03
52GO:0010091: trichome branching1.08E-03
53GO:0048868: pollen tube development1.25E-03
54GO:0010197: polar nucleus fusion1.25E-03
55GO:0009737: response to abscisic acid1.30E-03
56GO:0010183: pollen tube guidance1.37E-03
57GO:0010286: heat acclimation1.70E-03
58GO:0009911: positive regulation of flower development1.83E-03
59GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.90E-03
60GO:0016567: protein ubiquitination2.04E-03
61GO:0006888: ER to Golgi vesicle-mediated transport2.04E-03
62GO:0009910: negative regulation of flower development2.41E-03
63GO:0009553: embryo sac development4.63E-03
64GO:0000398: mRNA splicing, via spliceosome5.22E-03
65GO:0006810: transport6.39E-03
66GO:0016036: cellular response to phosphate starvation6.56E-03
67GO:0006468: protein phosphorylation6.63E-03
68GO:0040008: regulation of growth6.67E-03
69GO:0010150: leaf senescence6.89E-03
70GO:0009723: response to ethylene1.03E-02
71GO:0010200: response to chitin1.11E-02
72GO:0016192: vesicle-mediated transport1.13E-02
73GO:0006886: intracellular protein transport1.26E-02
74GO:0009751: response to salicylic acid1.42E-02
75GO:0009873: ethylene-activated signaling pathway1.72E-02
76GO:0009734: auxin-activated signaling pathway1.82E-02
77GO:0009908: flower development2.00E-02
78GO:0009738: abscisic acid-activated signaling pathway2.10E-02
79GO:0051301: cell division2.29E-02
80GO:0006351: transcription, DNA-templated2.42E-02
81GO:0006952: defense response2.43E-02
82GO:0006511: ubiquitin-dependent protein catabolic process2.68E-02
83GO:0009414: response to water deprivation3.50E-02
84GO:0042742: defense response to bacterium3.56E-02
85GO:0015031: protein transport4.22E-02
RankGO TermAdjusted P value
1GO:0005085: guanyl-nucleotide exchange factor activity1.14E-06
2GO:0016874: ligase activity6.50E-06
3GO:0005515: protein binding1.97E-05
4GO:0019789: SUMO transferase activity7.70E-05
5GO:0005086: ARF guanyl-nucleotide exchange factor activity1.07E-04
6GO:0004709: MAP kinase kinase kinase activity1.74E-04
7GO:0030674: protein binding, bridging2.90E-04
8GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.32E-04
9GO:0001055: RNA polymerase II activity4.18E-04
10GO:0031490: chromatin DNA binding4.18E-04
11GO:0004713: protein tyrosine kinase activity4.63E-04
12GO:0004674: protein serine/threonine kinase activity6.19E-04
13GO:0003712: transcription cofactor activity7.02E-04
14GO:0004842: ubiquitin-protein transferase activity7.67E-04
15GO:0004407: histone deacetylase activity8.05E-04
16GO:0004402: histone acetyltransferase activity1.19E-03
17GO:0003713: transcription coactivator activity1.25E-03
18GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.70E-03
19GO:0043621: protein self-association3.20E-03
20GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.72E-03
21GO:0016301: kinase activity3.92E-03
22GO:0004672: protein kinase activity6.39E-03
23GO:0008270: zinc ion binding7.31E-03
24GO:0000166: nucleotide binding2.15E-02
25GO:0005215: transporter activity3.82E-02
26GO:0003729: mRNA binding4.73E-02
RankGO TermAdjusted P value
1GO:0031931: TORC1 complex5.03E-05
2GO:0030127: COPII vesicle coat1.74E-04
3GO:0032588: trans-Golgi network membrane1.74E-04
4GO:0000118: histone deacetylase complex2.11E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane2.50E-04
6GO:0005665: DNA-directed RNA polymerase II, core complex5.55E-04
7GO:0005769: early endosome7.53E-04
8GO:0009506: plasmodesma2.73E-03
9GO:0005802: trans-Golgi network3.46E-03
10GO:0005681: spliceosomal complex4.17E-03
11GO:0010008: endosome membrane4.26E-03
12GO:0016607: nuclear speck4.26E-03
13GO:0000139: Golgi membrane5.89E-03
14GO:0005829: cytosol7.35E-03
15GO:0080008: Cul4-RING E3 ubiquitin ligase complex9.97E-03
16GO:0005634: nucleus2.63E-02
17GO:0005768: endosome3.30E-02
18GO:0005886: plasma membrane4.02E-02
19GO:0009505: plant-type cell wall4.18E-02
20GO:0005789: endoplasmic reticulum membrane4.81E-02
Gene type



Gene DE type