co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G53370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0009264: deoxyribonucleotide catabolic process	0.00E+00
4	GO:0080167: response to karrikin	5.05E-07
5	GO:0071492: cellular response to UV-A	9.50E-07
6	GO:0009813: flavonoid biosynthetic process	1.44E-06
7	GO:0071486: cellular response to high light intensity	4.38E-06
8	GO:0009765: photosynthesis, light harvesting	4.38E-06
9	GO:0048438: floral whorl development	6.58E-05
10	GO:0071490: cellular response to far red light	6.58E-05
11	GO:0016119: carotene metabolic process	6.58E-05
12	GO:0051555: flavonol biosynthetic process	6.92E-05
13	GO:0009698: phenylpropanoid metabolic process	8.19E-05
14	GO:0009718: anthocyanin-containing compound biosynthetic process	1.11E-04
15	GO:0009225: nucleotide-sugar metabolic process	1.44E-04
16	GO:0071491: cellular response to red light	1.59E-04
17	GO:0010220: positive regulation of vernalization response	1.59E-04
18	GO:0080183: response to photooxidative stress	1.59E-04
19	GO:1900386: positive regulation of flavonol biosynthetic process	1.59E-04
20	GO:0071395: cellular response to jasmonic acid stimulus	1.59E-04
21	GO:0071712: ER-associated misfolded protein catabolic process	1.59E-04
22	GO:0010224: response to UV-B	1.67E-04
23	GO:0009411: response to UV	2.68E-04
24	GO:1901562: response to paraquat	2.69E-04
25	GO:0010253: UDP-rhamnose biosynthetic process	2.69E-04
26	GO:0040009: regulation of growth rate	2.69E-04
27	GO:0009650: UV protection	3.90E-04
28	GO:0006572: tyrosine catabolic process	3.90E-04
29	GO:0009963: positive regulation of flavonoid biosynthetic process	3.90E-04
30	GO:0042823: pyridoxal phosphate biosynthetic process	3.90E-04
31	GO:0071483: cellular response to blue light	5.20E-04
32	GO:0034613: cellular protein localization	5.20E-04
33	GO:0010117: photoprotection	6.60E-04
34	GO:0016123: xanthophyll biosynthetic process	6.60E-04
35	GO:0009435: NAD biosynthetic process	6.60E-04
36	GO:0016094: polyprenol biosynthetic process	6.60E-04
37	GO:0071493: cellular response to UV-B	6.60E-04
38	GO:0019408: dolichol biosynthetic process	6.60E-04
39	GO:0071368: cellular response to cytokinin stimulus	6.60E-04
40	GO:0010304: PSII associated light-harvesting complex II catabolic process	8.06E-04
41	GO:0042732: D-xylose metabolic process	8.06E-04
42	GO:0010315: auxin efflux	8.06E-04
43	GO:0006559: L-phenylalanine catabolic process	8.06E-04
44	GO:0000060: protein import into nucleus, translocation	8.06E-04
45	GO:0010076: maintenance of floral meristem identity	9.59E-04
46	GO:0010077: maintenance of inflorescence meristem identity	9.59E-04
47	GO:0031540: regulation of anthocyanin biosynthetic process	1.29E-03
48	GO:0009926: auxin polar transport	1.34E-03
49	GO:0015996: chlorophyll catabolic process	1.47E-03
50	GO:0010380: regulation of chlorophyll biosynthetic process	1.85E-03
51	GO:0006629: lipid metabolic process	1.91E-03
52	GO:0030154: cell differentiation	2.26E-03
53	GO:0000272: polysaccharide catabolic process	2.26E-03
54	GO:0009733: response to auxin	2.37E-03
55	GO:0016925: protein sumoylation	2.48E-03
56	GO:0010582: floral meristem determinacy	2.48E-03
57	GO:0018105: peptidyl-serine phosphorylation	2.60E-03
58	GO:0018107: peptidyl-threonine phosphorylation	2.70E-03
59	GO:0010223: secondary shoot formation	2.93E-03
60	GO:0009934: regulation of meristem structural organization	2.93E-03
61	GO:0034605: cellular response to heat	2.93E-03
62	GO:0019853: L-ascorbic acid biosynthetic process	3.16E-03
63	GO:0010030: positive regulation of seed germination	3.16E-03
64	GO:0009768: photosynthesis, light harvesting in photosystem I	3.90E-03
65	GO:0035556: intracellular signal transduction	4.23E-03
66	GO:0009739: response to gibberellin	4.85E-03
67	GO:0042127: regulation of cell proliferation	4.98E-03
68	GO:0010584: pollen exine formation	4.98E-03
69	GO:0019722: calcium-mediated signaling	4.98E-03
70	GO:0016117: carotenoid biosynthetic process	5.26E-03
71	GO:0006520: cellular amino acid metabolic process	5.85E-03
72	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	6.76E-03
73	GO:0010252: auxin homeostasis	7.73E-03
74	GO:0009723: response to ethylene	7.74E-03
75	GO:0007267: cell-cell signaling	8.06E-03
76	GO:0009911: positive regulation of flower development	8.74E-03
77	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.08E-03
78	GO:0015979: photosynthesis	9.48E-03
79	GO:0071555: cell wall organization	9.67E-03
80	GO:0048573: photoperiodism, flowering	9.79E-03
81	GO:0018298: protein-chromophore linkage	1.05E-02
82	GO:0010311: lateral root formation	1.09E-02
83	GO:0010218: response to far red light	1.13E-02
84	GO:0006811: ion transport	1.13E-02
85	GO:0010119: regulation of stomatal movement	1.17E-02
86	GO:0007568: aging	1.17E-02
87	GO:0009637: response to blue light	1.24E-02
88	GO:0008152: metabolic process	1.35E-02
89	GO:0010114: response to red light	1.49E-02
90	GO:0042546: cell wall biogenesis	1.53E-02
91	GO:0000165: MAPK cascade	1.70E-02
92	GO:0031347: regulation of defense response	1.70E-02
93	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.70E-02
94	GO:0009809: lignin biosynthetic process	1.84E-02
95	GO:0006486: protein glycosylation	1.84E-02
96	GO:0009909: regulation of flower development	1.98E-02
97	GO:0009738: abscisic acid-activated signaling pathway	2.11E-02
98	GO:0009611: response to wounding	2.23E-02
99	GO:0055114: oxidation-reduction process	2.45E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	2.46E-02
101	GO:0045893: positive regulation of transcription, DNA-templated	2.51E-02
102	GO:0055085: transmembrane transport	2.77E-02
103	GO:0009058: biosynthetic process	2.88E-02
104	GO:0016036: cellular response to phosphate starvation	3.32E-02
105	GO:0006468: protein phosphorylation	4.27E-02
106	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	4.50E-02

Rank	GO Term	Adjusted P value
1	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
2	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0008734: L-aspartate oxidase activity	0.00E+00
5	GO:0047918: GDP-mannose 3,5-epimerase activity	0.00E+00
6	GO:0045430: chalcone isomerase activity	4.38E-06
7	GO:0016168: chlorophyll binding	3.54E-05
8	GO:0045486: naringenin 3-dioxygenase activity	6.58E-05
9	GO:0010291: carotene beta-ring hydroxylase activity	1.59E-04
10	GO:0044390: ubiquitin-like protein conjugating enzyme binding	1.59E-04
11	GO:0008460: dTDP-glucose 4,6-dehydratase activity	1.59E-04
12	GO:0010280: UDP-L-rhamnose synthase activity	1.59E-04
13	GO:0050377: UDP-glucose 4,6-dehydratase activity	1.59E-04
14	GO:0033897: ribonuclease T2 activity	2.69E-04
15	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	2.69E-04
16	GO:0008253: 5'-nucleotidase activity	2.69E-04
17	GO:0008106: alcohol dehydrogenase (NADP+) activity	3.90E-04
18	GO:0003824: catalytic activity	4.65E-04
19	GO:0046527: glucosyltransferase activity	5.20E-04
20	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	5.20E-04
21	GO:0080032: methyl jasmonate esterase activity	5.20E-04
22	GO:0016491: oxidoreductase activity	6.43E-04
23	GO:0002094: polyprenyltransferase activity	6.60E-04
24	GO:0031386: protein tag	6.60E-04
25	GO:0045547: dehydrodolichyl diphosphate synthase activity	6.60E-04
26	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	8.06E-04
27	GO:0035252: UDP-xylosyltransferase activity	8.06E-04
28	GO:0080030: methyl indole-3-acetate esterase activity	8.06E-04
29	GO:0008429: phosphatidylethanolamine binding	8.06E-04
30	GO:0016161: beta-amylase activity	9.59E-04
31	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.12E-03
32	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.12E-03
33	GO:0016621: cinnamoyl-CoA reductase activity	1.12E-03
34	GO:0047893: flavonol 3-O-glucosyltransferase activity	1.29E-03
35	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.47E-03
36	GO:0016207: 4-coumarate-CoA ligase activity	1.65E-03
37	GO:0009672: auxin:proton symporter activity	1.85E-03
38	GO:0047372: acylglycerol lipase activity	2.26E-03
39	GO:0004860: protein kinase inhibitor activity	2.26E-03
40	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.31E-03
41	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.31E-03
42	GO:0004521: endoribonuclease activity	2.48E-03
43	GO:0010329: auxin efflux transmembrane transporter activity	2.70E-03
44	GO:0016757: transferase activity, transferring glycosyl groups	3.36E-03
45	GO:0031409: pigment binding	3.40E-03
46	GO:0031418: L-ascorbic acid binding	3.65E-03
47	GO:0004176: ATP-dependent peptidase activity	4.17E-03
48	GO:0035251: UDP-glucosyltransferase activity	4.17E-03
49	GO:0004540: ribonuclease activity	4.17E-03
50	GO:0022891: substrate-specific transmembrane transporter activity	4.70E-03
51	GO:0008194: UDP-glycosyltransferase activity	4.85E-03
52	GO:0016853: isomerase activity	6.15E-03
53	GO:0046982: protein heterodimerization activity	6.57E-03
54	GO:0016759: cellulose synthase activity	7.73E-03
55	GO:0008237: metallopeptidase activity	8.06E-03
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.44E-03
57	GO:0004683: calmodulin-dependent protein kinase activity	9.79E-03
58	GO:0004806: triglyceride lipase activity	9.79E-03
59	GO:0004222: metalloendopeptidase activity	1.13E-02
60	GO:0051287: NAD binding	1.70E-02
61	GO:0016887: ATPase activity	1.91E-02
62	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.12E-02
63	GO:0016874: ligase activity	2.26E-02
64	GO:0015035: protein disulfide oxidoreductase activity	2.41E-02
65	GO:0016758: transferase activity, transferring hexosyl groups	2.72E-02
66	GO:0030170: pyridoxal phosphate binding	2.99E-02
67	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.04E-02
68	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.32E-02
69	GO:0008017: microtubule binding	3.60E-02
70	GO:0016788: hydrolase activity, acting on ester bonds	4.82E-02
71	GO:0003682: chromatin binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0009523: photosystem II	1.58E-05
2	GO:0009507: chloroplast	3.11E-05
3	GO:0042406: extrinsic component of endoplasmic reticulum membrane	2.69E-04
4	GO:0036513: Derlin-1 retrotranslocation complex	3.90E-04
5	GO:0009522: photosystem I	3.97E-04
6	GO:0010287: plastoglobule	2.99E-03
7	GO:0005737: cytoplasm	3.11E-03
8	GO:0030076: light-harvesting complex	3.16E-03
9	GO:0009535: chloroplast thylakoid membrane	6.75E-03
10	GO:0005783: endoplasmic reticulum	1.18E-02
11	GO:0043231: intracellular membrane-bounded organelle	1.35E-02
12	GO:0009543: chloroplast thylakoid lumen	2.77E-02
13	GO:0031225: anchored component of membrane	3.41E-02
14	GO:0009705: plant-type vacuole membrane	3.49E-02