Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G52860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0006983: ER overload response0.00E+00
3GO:0006793: phosphorus metabolic process0.00E+00
4GO:0033587: shikimate biosynthetic process0.00E+00
5GO:0051238: sequestering of metal ion0.00E+00
6GO:0006182: cGMP biosynthetic process0.00E+00
7GO:0072722: response to amitrole0.00E+00
8GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
9GO:0043201: response to leucine0.00E+00
10GO:0080052: response to histidine0.00E+00
11GO:0080053: response to phenylalanine0.00E+00
12GO:0042742: defense response to bacterium1.81E-09
13GO:0071456: cellular response to hypoxia1.47E-08
14GO:0006032: chitin catabolic process1.44E-06
15GO:0009617: response to bacterium2.38E-06
16GO:0006468: protein phosphorylation3.95E-06
17GO:0051707: response to other organism4.31E-06
18GO:0043066: negative regulation of apoptotic process7.51E-06
19GO:0010120: camalexin biosynthetic process2.45E-05
20GO:0010204: defense response signaling pathway, resistance gene-independent2.45E-05
21GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway2.60E-05
22GO:0009751: response to salicylic acid4.67E-05
23GO:0000272: polysaccharide catabolic process7.24E-05
24GO:0009636: response to toxic substance7.48E-05
25GO:0006855: drug transmembrane transport8.13E-05
26GO:0002237: response to molecule of bacterial origin1.31E-04
27GO:0009697: salicylic acid biosynthetic process1.54E-04
28GO:0009620: response to fungus1.91E-04
29GO:0009817: defense response to fungus, incompatible interaction2.14E-04
30GO:0002238: response to molecule of fungal origin2.21E-04
31GO:0006952: defense response2.42E-04
32GO:0006874: cellular calcium ion homeostasis2.43E-04
33GO:0009407: toxin catabolic process2.52E-04
34GO:0016998: cell wall macromolecule catabolic process2.77E-04
35GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.97E-04
36GO:0055114: oxidation-reduction process3.73E-04
37GO:1900057: positive regulation of leaf senescence3.84E-04
38GO:1901183: positive regulation of camalexin biosynthetic process4.10E-04
39GO:0032491: detection of molecule of fungal origin4.10E-04
40GO:0042759: long-chain fatty acid biosynthetic process4.10E-04
41GO:1903648: positive regulation of chlorophyll catabolic process4.10E-04
42GO:0015760: glucose-6-phosphate transport4.10E-04
43GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.10E-04
44GO:0010941: regulation of cell death4.10E-04
45GO:0010726: positive regulation of hydrogen peroxide metabolic process4.10E-04
46GO:0010421: hydrogen peroxide-mediated programmed cell death4.10E-04
47GO:0030091: protein repair4.80E-04
48GO:0050832: defense response to fungus4.82E-04
49GO:0010200: response to chitin5.13E-04
50GO:0010150: leaf senescence6.32E-04
51GO:0010193: response to ozone7.01E-04
52GO:0002229: defense response to oomycetes7.01E-04
53GO:0010112: regulation of systemic acquired resistance7.02E-04
54GO:0015712: hexose phosphate transport8.88E-04
55GO:0042939: tripeptide transport8.88E-04
56GO:0051592: response to calcium ion8.88E-04
57GO:0009838: abscission8.88E-04
58GO:0009805: coumarin biosynthetic process8.88E-04
59GO:0048569: post-embryonic animal organ development8.88E-04
60GO:0009866: induced systemic resistance, ethylene mediated signaling pathway8.88E-04
61GO:0019374: galactolipid metabolic process8.88E-04
62GO:0002240: response to molecule of oomycetes origin8.88E-04
63GO:0044419: interspecies interaction between organisms8.88E-04
64GO:0010252: auxin homeostasis8.93E-04
65GO:0009688: abscisic acid biosynthetic process9.63E-04
66GO:0009626: plant-type hypersensitive response1.07E-03
67GO:0009682: induced systemic resistance1.11E-03
68GO:0009627: systemic acquired resistance1.28E-03
69GO:0071367: cellular response to brassinosteroid stimulus1.44E-03
70GO:0009062: fatty acid catabolic process1.44E-03
71GO:0010359: regulation of anion channel activity1.44E-03
72GO:0035436: triose phosphate transmembrane transport1.44E-03
73GO:0010351: lithium ion transport1.44E-03
74GO:0010476: gibberellin mediated signaling pathway1.44E-03
75GO:0010325: raffinose family oligosaccharide biosynthetic process1.44E-03
76GO:0010272: response to silver ion1.44E-03
77GO:0015692: lead ion transport1.44E-03
78GO:0015714: phosphoenolpyruvate transport1.44E-03
79GO:0080168: abscisic acid transport1.44E-03
80GO:0006882: cellular zinc ion homeostasis2.08E-03
81GO:0046513: ceramide biosynthetic process2.08E-03
82GO:0045017: glycerolipid biosynthetic process2.08E-03
83GO:0010116: positive regulation of abscisic acid biosynthetic process2.08E-03
84GO:0070301: cellular response to hydrogen peroxide2.08E-03
85GO:0010104: regulation of ethylene-activated signaling pathway2.08E-03
86GO:0042542: response to hydrogen peroxide2.77E-03
87GO:0015713: phosphoglycerate transport2.80E-03
88GO:0080142: regulation of salicylic acid biosynthetic process2.80E-03
89GO:0042938: dipeptide transport2.80E-03
90GO:0010109: regulation of photosynthesis2.80E-03
91GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.80E-03
92GO:0006536: glutamate metabolic process2.80E-03
93GO:1901002: positive regulation of response to salt stress2.80E-03
94GO:0071369: cellular response to ethylene stimulus3.25E-03
95GO:0010227: floral organ abscission3.25E-03
96GO:0009737: response to abscisic acid3.43E-03
97GO:0045487: gibberellin catabolic process3.59E-03
98GO:0034052: positive regulation of plant-type hypersensitive response3.59E-03
99GO:0000304: response to singlet oxygen3.59E-03
100GO:0042631: cellular response to water deprivation4.15E-03
101GO:0009643: photosynthetic acclimation4.44E-03
102GO:0050665: hydrogen peroxide biosynthetic process4.44E-03
103GO:0006561: proline biosynthetic process4.44E-03
104GO:0010942: positive regulation of cell death4.44E-03
105GO:0015691: cadmium ion transport4.44E-03
106GO:0010256: endomembrane system organization4.44E-03
107GO:1902456: regulation of stomatal opening4.44E-03
108GO:0009854: oxidative photosynthetic carbon pathway5.35E-03
109GO:0048444: floral organ morphogenesis5.35E-03
110GO:0050829: defense response to Gram-negative bacterium6.32E-03
111GO:0030026: cellular manganese ion homeostasis6.32E-03
112GO:1902074: response to salt6.32E-03
113GO:1900056: negative regulation of leaf senescence6.32E-03
114GO:0009624: response to nematode6.68E-03
115GO:2000070: regulation of response to water deprivation7.35E-03
116GO:0006644: phospholipid metabolic process7.35E-03
117GO:0009642: response to light intensity7.35E-03
118GO:0051607: defense response to virus7.56E-03
119GO:0009615: response to virus8.01E-03
120GO:0009808: lignin metabolic process8.43E-03
121GO:0009699: phenylpropanoid biosynthetic process8.43E-03
122GO:0001558: regulation of cell growth8.43E-03
123GO:0009056: catabolic process9.58E-03
124GO:0006098: pentose-phosphate shunt9.58E-03
125GO:0008219: cell death1.05E-02
126GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.08E-02
127GO:0009870: defense response signaling pathway, resistance gene-dependent1.20E-02
128GO:0043069: negative regulation of programmed cell death1.20E-02
129GO:0010162: seed dormancy process1.20E-02
130GO:0055062: phosphate ion homeostasis1.20E-02
131GO:0009089: lysine biosynthetic process via diaminopimelate1.33E-02
132GO:0045087: innate immune response1.33E-02
133GO:0000038: very long-chain fatty acid metabolic process1.33E-02
134GO:0045037: protein import into chloroplast stroma1.47E-02
135GO:0012501: programmed cell death1.47E-02
136GO:0002213: defense response to insect1.47E-02
137GO:0016024: CDP-diacylglycerol biosynthetic process1.47E-02
138GO:0007166: cell surface receptor signaling pathway1.59E-02
139GO:0055046: microgametogenesis1.61E-02
140GO:0009718: anthocyanin-containing compound biosynthetic process1.61E-02
141GO:0010102: lateral root morphogenesis1.61E-02
142GO:0010143: cutin biosynthetic process1.75E-02
143GO:0070588: calcium ion transmembrane transport1.90E-02
144GO:0007165: signal transduction2.13E-02
145GO:0006812: cation transport2.16E-02
146GO:0042538: hyperosmotic salinity response2.16E-02
147GO:0005992: trehalose biosynthetic process2.21E-02
148GO:0006813: potassium ion transport2.32E-02
149GO:0009809: lignin biosynthetic process2.32E-02
150GO:0051302: regulation of cell division2.37E-02
151GO:0031348: negative regulation of defense response2.70E-02
152GO:0019748: secondary metabolic process2.70E-02
153GO:0009723: response to ethylene2.81E-02
154GO:0071215: cellular response to abscisic acid stimulus2.87E-02
155GO:0009686: gibberellin biosynthetic process2.87E-02
156GO:0010584: pollen exine formation3.05E-02
157GO:0006817: phosphate ion transport3.05E-02
158GO:0009561: megagametogenesis3.05E-02
159GO:0009738: abscisic acid-activated signaling pathway3.22E-02
160GO:0042391: regulation of membrane potential3.41E-02
161GO:0071472: cellular response to salt stress3.60E-02
162GO:0006885: regulation of pH3.60E-02
163GO:0006979: response to oxidative stress3.62E-02
164GO:0048544: recognition of pollen3.79E-02
165GO:0006814: sodium ion transport3.79E-02
166GO:0042752: regulation of circadian rhythm3.79E-02
167GO:0009749: response to glucose3.99E-02
168GO:0009851: auxin biosynthetic process3.99E-02
169GO:0006623: protein targeting to vacuole3.99E-02
170GO:0006635: fatty acid beta-oxidation4.18E-02
171GO:0009845: seed germination4.46E-02
172GO:0032259: methylation4.68E-02
173GO:0016042: lipid catabolic process4.77E-02
174GO:0009639: response to red or far red light4.79E-02
RankGO TermAdjusted P value
1GO:0003796: lysozyme activity0.00E+00
2GO:0035885: exochitinase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0008843: endochitinase activity0.00E+00
5GO:0010279: indole-3-acetic acid amido synthetase activity9.83E-07
6GO:0016301: kinase activity2.24E-06
7GO:0004674: protein serine/threonine kinase activity3.09E-06
8GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.58E-05
9GO:0004364: glutathione transferase activity5.27E-05
10GO:0004568: chitinase activity5.74E-05
11GO:0050660: flavin adenine dinucleotide binding7.77E-05
12GO:0008061: chitin binding1.56E-04
13GO:0005516: calmodulin binding2.08E-04
14GO:0015238: drug transmembrane transporter activity2.33E-04
15GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.97E-04
16GO:0010285: L,L-diaminopimelate aminotransferase activity4.10E-04
17GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor4.10E-04
18GO:0008809: carnitine racemase activity4.10E-04
19GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.10E-04
20GO:0015297: antiporter activity5.82E-04
21GO:0042937: tripeptide transporter activity8.88E-04
22GO:0010331: gibberellin binding8.88E-04
23GO:0050291: sphingosine N-acyltransferase activity8.88E-04
24GO:0045543: gibberellin 2-beta-dioxygenase activity8.88E-04
25GO:0015152: glucose-6-phosphate transmembrane transporter activity8.88E-04
26GO:0009055: electron carrier activity1.20E-03
27GO:0004383: guanylate cyclase activity1.44E-03
28GO:0071917: triose-phosphate transmembrane transporter activity1.44E-03
29GO:0000975: regulatory region DNA binding1.44E-03
30GO:0005217: intracellular ligand-gated ion channel activity1.82E-03
31GO:0004970: ionotropic glutamate receptor activity1.82E-03
32GO:0030246: carbohydrate binding1.83E-03
33GO:0005524: ATP binding1.85E-03
34GO:0030145: manganese ion binding1.87E-03
35GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.08E-03
36GO:0004165: dodecenoyl-CoA delta-isomerase activity2.08E-03
37GO:0004351: glutamate decarboxylase activity2.08E-03
38GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.08E-03
39GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.08E-03
40GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.08E-03
41GO:0004031: aldehyde oxidase activity2.80E-03
42GO:0050302: indole-3-acetaldehyde oxidase activity2.80E-03
43GO:0009916: alternative oxidase activity2.80E-03
44GO:0008891: glycolate oxidase activity2.80E-03
45GO:0015120: phosphoglycerate transmembrane transporter activity2.80E-03
46GO:0015368: calcium:cation antiporter activity2.80E-03
47GO:0042936: dipeptide transporter activity2.80E-03
48GO:0015369: calcium:proton antiporter activity2.80E-03
49GO:0004499: N,N-dimethylaniline monooxygenase activity3.54E-03
50GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.59E-03
51GO:0045431: flavonol synthase activity3.59E-03
52GO:0004866: endopeptidase inhibitor activity4.44E-03
53GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.44E-03
54GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.44E-03
55GO:0045735: nutrient reservoir activity5.28E-03
56GO:0004602: glutathione peroxidase activity5.35E-03
57GO:0004144: diacylglycerol O-acyltransferase activity5.35E-03
58GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.35E-03
59GO:0005085: guanyl-nucleotide exchange factor activity6.32E-03
60GO:0004620: phospholipase activity6.32E-03
61GO:0102425: myricetin 3-O-glucosyltransferase activity6.32E-03
62GO:0102360: daphnetin 3-O-glucosyltransferase activity6.32E-03
63GO:0008483: transaminase activity7.12E-03
64GO:0004033: aldo-keto reductase (NADP) activity7.35E-03
65GO:0015491: cation:cation antiporter activity7.35E-03
66GO:0047893: flavonol 3-O-glucosyltransferase activity7.35E-03
67GO:0051213: dioxygenase activity8.01E-03
68GO:0030247: polysaccharide binding9.44E-03
69GO:0004683: calmodulin-dependent protein kinase activity9.44E-03
70GO:0071949: FAD binding9.58E-03
71GO:0008757: S-adenosylmethionine-dependent methyltransferase activity9.95E-03
72GO:0047617: acyl-CoA hydrolase activity1.08E-02
73GO:0008171: O-methyltransferase activity1.20E-02
74GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.33E-02
75GO:0008559: xenobiotic-transporting ATPase activity1.33E-02
76GO:0003680: AT DNA binding1.33E-02
77GO:0050661: NADP binding1.52E-02
78GO:0004022: alcohol dehydrogenase (NAD) activity1.61E-02
79GO:0005315: inorganic phosphate transmembrane transporter activity1.61E-02
80GO:0015114: phosphate ion transmembrane transporter activity1.61E-02
81GO:0005388: calcium-transporting ATPase activity1.61E-02
82GO:0030552: cAMP binding1.90E-02
83GO:0004867: serine-type endopeptidase inhibitor activity1.90E-02
84GO:0030553: cGMP binding1.90E-02
85GO:0008134: transcription factor binding2.21E-02
86GO:0015079: potassium ion transmembrane transporter activity2.37E-02
87GO:0005216: ion channel activity2.37E-02
88GO:0016298: lipase activity2.40E-02
89GO:0035251: UDP-glucosyltransferase activity2.53E-02
90GO:0004672: protein kinase activity2.68E-02
91GO:0043565: sequence-specific DNA binding2.98E-02
92GO:0004497: monooxygenase activity3.06E-02
93GO:0005509: calcium ion binding3.12E-02
94GO:0005102: receptor binding3.23E-02
95GO:0005451: monovalent cation:proton antiporter activity3.41E-02
96GO:0005249: voltage-gated potassium channel activity3.41E-02
97GO:0030551: cyclic nucleotide binding3.41E-02
98GO:0052689: carboxylic ester hydrolase activity3.46E-02
99GO:0015299: solute:proton antiporter activity3.79E-02
100GO:0010181: FMN binding3.79E-02
101GO:0048038: quinone binding4.18E-02
102GO:0005215: transporter activity4.21E-02
103GO:0030170: pyridoxal phosphate binding4.58E-02
104GO:0015385: sodium:proton antiporter activity4.59E-02
105GO:0016791: phosphatase activity4.79E-02
RankGO TermAdjusted P value
1GO:0098687: chromosomal region0.00E+00
2GO:0016021: integral component of membrane1.53E-08
3GO:0005886: plasma membrane1.14E-05
4GO:0032588: trans-Golgi network membrane4.44E-03
5GO:0005770: late endosome4.47E-03
6GO:0000325: plant-type vacuole1.21E-02
7GO:0048046: apoplast1.31E-02
8GO:0005615: extracellular space1.55E-02
9GO:0046658: anchored component of plasma membrane1.92E-02
10GO:0005576: extracellular region2.25E-02
11GO:0031225: anchored component of membrane2.31E-02
12GO:0070469: respiratory chain2.37E-02
13GO:0071944: cell periphery4.59E-02
Gene type



Gene DE type