GO Enrichment Analysis of Co-expressed Genes with
AT5G52100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015739: sialic acid transport | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 1.88E-05 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 2.49E-05 |
| 8 | GO:0006810: transport | 4.51E-05 |
| 9 | GO:0010037: response to carbon dioxide | 4.54E-05 |
| 10 | GO:0015976: carbon utilization | 4.54E-05 |
| 11 | GO:2000122: negative regulation of stomatal complex development | 4.54E-05 |
| 12 | GO:0010190: cytochrome b6f complex assembly | 1.05E-04 |
| 13 | GO:0000413: protein peptidyl-prolyl isomerization | 1.96E-04 |
| 14 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.57E-04 |
| 15 | GO:0071370: cellular response to gibberellin stimulus | 2.57E-04 |
| 16 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.57E-04 |
| 17 | GO:1904964: positive regulation of phytol biosynthetic process | 2.57E-04 |
| 18 | GO:0042371: vitamin K biosynthetic process | 2.57E-04 |
| 19 | GO:0010583: response to cyclopentenone | 3.18E-04 |
| 20 | GO:0006508: proteolysis | 5.06E-04 |
| 21 | GO:2000123: positive regulation of stomatal complex development | 5.68E-04 |
| 22 | GO:0006695: cholesterol biosynthetic process | 5.68E-04 |
| 23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.68E-04 |
| 24 | GO:0006415: translational termination | 5.76E-04 |
| 25 | GO:0010411: xyloglucan metabolic process | 5.83E-04 |
| 26 | GO:0010020: chloroplast fission | 8.40E-04 |
| 27 | GO:0006954: inflammatory response | 9.22E-04 |
| 28 | GO:0006518: peptide metabolic process | 9.22E-04 |
| 29 | GO:0033591: response to L-ascorbic acid | 9.22E-04 |
| 30 | GO:0006833: water transport | 1.04E-03 |
| 31 | GO:0019344: cysteine biosynthetic process | 1.15E-03 |
| 32 | GO:0042546: cell wall biogenesis | 1.28E-03 |
| 33 | GO:0043572: plastid fission | 1.32E-03 |
| 34 | GO:0007231: osmosensory signaling pathway | 1.32E-03 |
| 35 | GO:0006241: CTP biosynthetic process | 1.32E-03 |
| 36 | GO:0006165: nucleoside diphosphate phosphorylation | 1.32E-03 |
| 37 | GO:0006228: UTP biosynthetic process | 1.32E-03 |
| 38 | GO:0009855: determination of bilateral symmetry | 1.32E-03 |
| 39 | GO:0061077: chaperone-mediated protein folding | 1.39E-03 |
| 40 | GO:0033500: carbohydrate homeostasis | 1.76E-03 |
| 41 | GO:2000038: regulation of stomatal complex development | 1.76E-03 |
| 42 | GO:0006546: glycine catabolic process | 1.76E-03 |
| 43 | GO:0006183: GTP biosynthetic process | 1.76E-03 |
| 44 | GO:0009658: chloroplast organization | 2.02E-03 |
| 45 | GO:0034220: ion transmembrane transport | 2.10E-03 |
| 46 | GO:0046785: microtubule polymerization | 2.25E-03 |
| 47 | GO:0031365: N-terminal protein amino acid modification | 2.25E-03 |
| 48 | GO:0010375: stomatal complex patterning | 2.25E-03 |
| 49 | GO:0006596: polyamine biosynthetic process | 2.77E-03 |
| 50 | GO:0048759: xylem vessel member cell differentiation | 2.77E-03 |
| 51 | GO:0042549: photosystem II stabilization | 2.77E-03 |
| 52 | GO:0016554: cytidine to uridine editing | 2.77E-03 |
| 53 | GO:0032973: amino acid export | 2.77E-03 |
| 54 | GO:0010014: meristem initiation | 3.33E-03 |
| 55 | GO:0042372: phylloquinone biosynthetic process | 3.33E-03 |
| 56 | GO:0009612: response to mechanical stimulus | 3.33E-03 |
| 57 | GO:0009854: oxidative photosynthetic carbon pathway | 3.33E-03 |
| 58 | GO:0010555: response to mannitol | 3.33E-03 |
| 59 | GO:0009955: adaxial/abaxial pattern specification | 3.33E-03 |
| 60 | GO:0080060: integument development | 3.33E-03 |
| 61 | GO:0071555: cell wall organization | 3.34E-03 |
| 62 | GO:0009645: response to low light intensity stimulus | 3.93E-03 |
| 63 | GO:0043090: amino acid import | 3.93E-03 |
| 64 | GO:0016126: sterol biosynthetic process | 4.03E-03 |
| 65 | GO:0009690: cytokinin metabolic process | 4.56E-03 |
| 66 | GO:0007155: cell adhesion | 4.56E-03 |
| 67 | GO:0009819: drought recovery | 4.56E-03 |
| 68 | GO:0009642: response to light intensity | 4.56E-03 |
| 69 | GO:0032544: plastid translation | 5.22E-03 |
| 70 | GO:0017004: cytochrome complex assembly | 5.22E-03 |
| 71 | GO:0009932: cell tip growth | 5.22E-03 |
| 72 | GO:0009657: plastid organization | 5.22E-03 |
| 73 | GO:0018298: protein-chromophore linkage | 5.25E-03 |
| 74 | GO:0010206: photosystem II repair | 5.92E-03 |
| 75 | GO:0080144: amino acid homeostasis | 5.92E-03 |
| 76 | GO:0033384: geranyl diphosphate biosynthetic process | 5.92E-03 |
| 77 | GO:0015780: nucleotide-sugar transport | 5.92E-03 |
| 78 | GO:0006098: pentose-phosphate shunt | 5.92E-03 |
| 79 | GO:0045337: farnesyl diphosphate biosynthetic process | 5.92E-03 |
| 80 | GO:0010119: regulation of stomatal movement | 6.07E-03 |
| 81 | GO:0016573: histone acetylation | 6.64E-03 |
| 82 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.64E-03 |
| 83 | GO:1900865: chloroplast RNA modification | 6.64E-03 |
| 84 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 7.40E-03 |
| 85 | GO:0006535: cysteine biosynthetic process from serine | 7.40E-03 |
| 86 | GO:0043069: negative regulation of programmed cell death | 7.40E-03 |
| 87 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.40E-03 |
| 88 | GO:0010072: primary shoot apical meristem specification | 8.19E-03 |
| 89 | GO:0006816: calcium ion transport | 8.19E-03 |
| 90 | GO:0006790: sulfur compound metabolic process | 9.00E-03 |
| 91 | GO:0008643: carbohydrate transport | 9.29E-03 |
| 92 | GO:0006094: gluconeogenesis | 9.85E-03 |
| 93 | GO:0009767: photosynthetic electron transport chain | 9.85E-03 |
| 94 | GO:0042254: ribosome biogenesis | 9.98E-03 |
| 95 | GO:0010207: photosystem II assembly | 1.07E-02 |
| 96 | GO:0010143: cutin biosynthetic process | 1.07E-02 |
| 97 | GO:0070588: calcium ion transmembrane transport | 1.16E-02 |
| 98 | GO:0046854: phosphatidylinositol phosphorylation | 1.16E-02 |
| 99 | GO:0005985: sucrose metabolic process | 1.16E-02 |
| 100 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.20E-02 |
| 101 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.25E-02 |
| 102 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.34E-02 |
| 103 | GO:0005992: trehalose biosynthetic process | 1.35E-02 |
| 104 | GO:0000027: ribosomal large subunit assembly | 1.35E-02 |
| 105 | GO:0006338: chromatin remodeling | 1.35E-02 |
| 106 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.35E-02 |
| 107 | GO:0006412: translation | 1.40E-02 |
| 108 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.45E-02 |
| 109 | GO:0007017: microtubule-based process | 1.45E-02 |
| 110 | GO:0080092: regulation of pollen tube growth | 1.65E-02 |
| 111 | GO:0019748: secondary metabolic process | 1.65E-02 |
| 112 | GO:0009814: defense response, incompatible interaction | 1.65E-02 |
| 113 | GO:0009793: embryo development ending in seed dormancy | 1.71E-02 |
| 114 | GO:0006284: base-excision repair | 1.86E-02 |
| 115 | GO:0000271: polysaccharide biosynthetic process | 2.09E-02 |
| 116 | GO:0080022: primary root development | 2.09E-02 |
| 117 | GO:0010087: phloem or xylem histogenesis | 2.09E-02 |
| 118 | GO:0042335: cuticle development | 2.09E-02 |
| 119 | GO:0045489: pectin biosynthetic process | 2.20E-02 |
| 120 | GO:0071554: cell wall organization or biogenesis | 2.56E-02 |
| 121 | GO:0006633: fatty acid biosynthetic process | 2.61E-02 |
| 122 | GO:0032502: developmental process | 2.68E-02 |
| 123 | GO:0010090: trichome morphogenesis | 2.80E-02 |
| 124 | GO:0007267: cell-cell signaling | 3.06E-02 |
| 125 | GO:0001666: response to hypoxia | 3.32E-02 |
| 126 | GO:0010027: thylakoid membrane organization | 3.32E-02 |
| 127 | GO:0015995: chlorophyll biosynthetic process | 3.73E-02 |
| 128 | GO:0009735: response to cytokinin | 3.83E-02 |
| 129 | GO:0009737: response to abscisic acid | 3.96E-02 |
| 130 | GO:0009817: defense response to fungus, incompatible interaction | 4.01E-02 |
| 131 | GO:0000160: phosphorelay signal transduction system | 4.16E-02 |
| 132 | GO:0009826: unidimensional cell growth | 4.26E-02 |
| 133 | GO:0009416: response to light stimulus | 4.28E-02 |
| 134 | GO:0009407: toxin catabolic process | 4.30E-02 |
| 135 | GO:0010218: response to far red light | 4.30E-02 |
| 136 | GO:0009860: pollen tube growth | 4.75E-02 |
| 137 | GO:0016051: carbohydrate biosynthetic process | 4.75E-02 |
| 138 | GO:0009637: response to blue light | 4.75E-02 |
| 139 | GO:0009853: photorespiration | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0015136: sialic acid transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 7 | GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.45E-08 |
| 10 | GO:0005528: FK506 binding | 2.45E-06 |
| 11 | GO:0019843: rRNA binding | 7.79E-06 |
| 12 | GO:0016149: translation release factor activity, codon specific | 2.51E-05 |
| 13 | GO:0003838: sterol 24-C-methyltransferase activity | 2.57E-04 |
| 14 | GO:0016768: spermine synthase activity | 2.57E-04 |
| 15 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.57E-04 |
| 16 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.91E-04 |
| 17 | GO:0003747: translation release factor activity | 3.60E-04 |
| 18 | GO:0050017: L-3-cyanoalanine synthase activity | 5.68E-04 |
| 19 | GO:0042389: omega-3 fatty acid desaturase activity | 5.68E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 5.68E-04 |
| 21 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 5.83E-04 |
| 22 | GO:0004089: carbonate dehydratase activity | 7.47E-04 |
| 23 | GO:0030267: glyoxylate reductase (NADP) activity | 9.22E-04 |
| 24 | GO:0050734: hydroxycinnamoyltransferase activity | 9.22E-04 |
| 25 | GO:0004185: serine-type carboxypeptidase activity | 1.22E-03 |
| 26 | GO:0004550: nucleoside diphosphate kinase activity | 1.32E-03 |
| 27 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.32E-03 |
| 28 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.76E-03 |
| 29 | GO:1990137: plant seed peroxidase activity | 1.76E-03 |
| 30 | GO:0043495: protein anchor | 1.76E-03 |
| 31 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.25E-03 |
| 32 | GO:0016208: AMP binding | 2.77E-03 |
| 33 | GO:0004332: fructose-bisphosphate aldolase activity | 2.77E-03 |
| 34 | GO:0051753: mannan synthase activity | 3.33E-03 |
| 35 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.33E-03 |
| 36 | GO:0004124: cysteine synthase activity | 3.33E-03 |
| 37 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.33E-03 |
| 38 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.33E-03 |
| 39 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.59E-03 |
| 40 | GO:0019899: enzyme binding | 3.93E-03 |
| 41 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 3.93E-03 |
| 42 | GO:0008235: metalloexopeptidase activity | 3.93E-03 |
| 43 | GO:0015250: water channel activity | 4.03E-03 |
| 44 | GO:0016168: chlorophyll binding | 4.26E-03 |
| 45 | GO:0003735: structural constituent of ribosome | 4.40E-03 |
| 46 | GO:0004564: beta-fructofuranosidase activity | 4.56E-03 |
| 47 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.22E-03 |
| 48 | GO:0004222: metalloendopeptidase activity | 5.79E-03 |
| 49 | GO:0004337: geranyltranstransferase activity | 5.92E-03 |
| 50 | GO:0004575: sucrose alpha-glucosidase activity | 6.64E-03 |
| 51 | GO:0004805: trehalose-phosphatase activity | 7.40E-03 |
| 52 | GO:0042802: identical protein binding | 7.58E-03 |
| 53 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 8.19E-03 |
| 54 | GO:0004177: aminopeptidase activity | 8.19E-03 |
| 55 | GO:0004161: dimethylallyltranstransferase activity | 8.19E-03 |
| 56 | GO:0015386: potassium:proton antiporter activity | 8.19E-03 |
| 57 | GO:0008289: lipid binding | 8.38E-03 |
| 58 | GO:0005509: calcium ion binding | 9.59E-03 |
| 59 | GO:0005262: calcium channel activity | 9.85E-03 |
| 60 | GO:0031409: pigment binding | 1.25E-02 |
| 61 | GO:0015079: potassium ion transmembrane transporter activity | 1.45E-02 |
| 62 | GO:0043424: protein histidine kinase binding | 1.45E-02 |
| 63 | GO:0004650: polygalacturonase activity | 1.51E-02 |
| 64 | GO:0004176: ATP-dependent peptidase activity | 1.55E-02 |
| 65 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.65E-02 |
| 66 | GO:0030570: pectate lyase activity | 1.76E-02 |
| 67 | GO:0022891: substrate-specific transmembrane transporter activity | 1.76E-02 |
| 68 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.84E-02 |
| 69 | GO:0008514: organic anion transmembrane transporter activity | 1.86E-02 |
| 70 | GO:0001085: RNA polymerase II transcription factor binding | 2.20E-02 |
| 71 | GO:0009055: electron carrier activity | 2.29E-02 |
| 72 | GO:0019901: protein kinase binding | 2.43E-02 |
| 73 | GO:0000156: phosphorelay response regulator activity | 2.80E-02 |
| 74 | GO:0016759: cellulose synthase activity | 2.93E-02 |
| 75 | GO:0005200: structural constituent of cytoskeleton | 3.06E-02 |
| 76 | GO:0008483: transaminase activity | 3.06E-02 |
| 77 | GO:0008237: metallopeptidase activity | 3.06E-02 |
| 78 | GO:0016413: O-acetyltransferase activity | 3.19E-02 |
| 79 | GO:0008236: serine-type peptidase activity | 3.87E-02 |
| 80 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.45E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 7.24E-20 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 5.00E-19 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.81E-14 |
| 4 | GO:0031977: thylakoid lumen | 1.03E-11 |
| 5 | GO:0009941: chloroplast envelope | 9.14E-08 |
| 6 | GO:0009579: thylakoid | 1.01E-07 |
| 7 | GO:0009570: chloroplast stroma | 1.62E-07 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 3.08E-06 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.09E-05 |
| 10 | GO:0019898: extrinsic component of membrane | 1.55E-05 |
| 11 | GO:0030095: chloroplast photosystem II | 4.73E-05 |
| 12 | GO:0048046: apoplast | 7.90E-05 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.57E-04 |
| 14 | GO:0009534: chloroplast thylakoid | 3.06E-04 |
| 15 | GO:0009505: plant-type cell wall | 4.80E-04 |
| 16 | GO:0031225: anchored component of membrane | 5.51E-04 |
| 17 | GO:0042170: plastid membrane | 5.68E-04 |
| 18 | GO:0042651: thylakoid membrane | 1.27E-03 |
| 19 | GO:0005775: vacuolar lumen | 1.32E-03 |
| 20 | GO:0046658: anchored component of plasma membrane | 1.59E-03 |
| 21 | GO:0031969: chloroplast membrane | 2.80E-03 |
| 22 | GO:0005618: cell wall | 2.81E-03 |
| 23 | GO:0005840: ribosome | 3.67E-03 |
| 24 | GO:0000123: histone acetyltransferase complex | 3.93E-03 |
| 25 | GO:0005811: lipid particle | 5.22E-03 |
| 26 | GO:0045298: tubulin complex | 5.92E-03 |
| 27 | GO:0015934: large ribosomal subunit | 6.07E-03 |
| 28 | GO:0005576: extracellular region | 7.20E-03 |
| 29 | GO:0055028: cortical microtubule | 7.40E-03 |
| 30 | GO:0016324: apical plasma membrane | 7.40E-03 |
| 31 | GO:0000312: plastid small ribosomal subunit | 1.07E-02 |
| 32 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.16E-02 |
| 33 | GO:0030076: light-harvesting complex | 1.16E-02 |
| 34 | GO:0005758: mitochondrial intermembrane space | 1.35E-02 |
| 35 | GO:0005773: vacuole | 1.46E-02 |
| 36 | GO:0009532: plastid stroma | 1.55E-02 |
| 37 | GO:0009706: chloroplast inner membrane | 1.65E-02 |
| 38 | GO:0000139: Golgi membrane | 1.86E-02 |
| 39 | GO:0009522: photosystem I | 2.32E-02 |
| 40 | GO:0009523: photosystem II | 2.43E-02 |
| 41 | GO:0005778: peroxisomal membrane | 3.06E-02 |
| 42 | GO:0010319: stromule | 3.06E-02 |
| 43 | GO:0016020: membrane | 3.06E-02 |
| 44 | GO:0005887: integral component of plasma membrane | 3.08E-02 |
| 45 | GO:0030529: intracellular ribonucleoprotein complex | 3.32E-02 |
| 46 | GO:0005667: transcription factor complex | 3.59E-02 |
| 47 | GO:0022626: cytosolic ribosome | 4.05E-02 |
| 48 | GO:0000325: plant-type vacuole | 4.45E-02 |