GO Enrichment Analysis of Co-expressed Genes with
AT5G52060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015822: ornithine transport | 0.00E+00 |
| 2 | GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene | 0.00E+00 |
| 3 | GO:0006659: phosphatidylserine biosynthetic process | 2.53E-05 |
| 4 | GO:0000066: mitochondrial ornithine transport | 2.53E-05 |
| 5 | GO:1902265: abscisic acid homeostasis | 2.53E-05 |
| 6 | GO:0071555: cell wall organization | 2.90E-05 |
| 7 | GO:0007154: cell communication | 6.44E-05 |
| 8 | GO:0045489: pectin biosynthetic process | 1.03E-04 |
| 9 | GO:0005977: glycogen metabolic process | 1.13E-04 |
| 10 | GO:0006011: UDP-glucose metabolic process | 1.13E-04 |
| 11 | GO:0031022: nuclear migration along microfilament | 1.13E-04 |
| 12 | GO:0006168: adenine salvage | 1.69E-04 |
| 13 | GO:0006166: purine ribonucleoside salvage | 1.69E-04 |
| 14 | GO:0006546: glycine catabolic process | 2.30E-04 |
| 15 | GO:0006021: inositol biosynthetic process | 2.30E-04 |
| 16 | GO:0009902: chloroplast relocation | 2.30E-04 |
| 17 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.30E-04 |
| 18 | GO:0009765: photosynthesis, light harvesting | 2.30E-04 |
| 19 | GO:0010236: plastoquinone biosynthetic process | 2.95E-04 |
| 20 | GO:0044209: AMP salvage | 2.95E-04 |
| 21 | GO:0032876: negative regulation of DNA endoreduplication | 2.95E-04 |
| 22 | GO:0016120: carotene biosynthetic process | 2.95E-04 |
| 23 | GO:0009637: response to blue light | 3.23E-04 |
| 24 | GO:0010942: positive regulation of cell death | 3.65E-04 |
| 25 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 3.65E-04 |
| 26 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.65E-04 |
| 27 | GO:0042546: cell wall biogenesis | 4.32E-04 |
| 28 | GO:0045926: negative regulation of growth | 4.36E-04 |
| 29 | GO:0017148: negative regulation of translation | 4.36E-04 |
| 30 | GO:0009903: chloroplast avoidance movement | 4.36E-04 |
| 31 | GO:0052543: callose deposition in cell wall | 5.89E-04 |
| 32 | GO:0007155: cell adhesion | 5.89E-04 |
| 33 | GO:0008610: lipid biosynthetic process | 5.89E-04 |
| 34 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.89E-04 |
| 35 | GO:0007389: pattern specification process | 6.69E-04 |
| 36 | GO:0009056: catabolic process | 7.52E-04 |
| 37 | GO:0010192: mucilage biosynthetic process | 9.24E-04 |
| 38 | GO:0030048: actin filament-based movement | 1.20E-03 |
| 39 | GO:0009825: multidimensional cell growth | 1.40E-03 |
| 40 | GO:0009833: plant-type primary cell wall biogenesis | 1.50E-03 |
| 41 | GO:0006833: water transport | 1.50E-03 |
| 42 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.72E-03 |
| 43 | GO:0008299: isoprenoid biosynthetic process | 1.72E-03 |
| 44 | GO:0019722: calcium-mediated signaling | 2.18E-03 |
| 45 | GO:0016117: carotenoid biosynthetic process | 2.30E-03 |
| 46 | GO:0000271: polysaccharide biosynthetic process | 2.42E-03 |
| 47 | GO:0034220: ion transmembrane transport | 2.42E-03 |
| 48 | GO:0010051: xylem and phloem pattern formation | 2.42E-03 |
| 49 | GO:0009741: response to brassinosteroid | 2.55E-03 |
| 50 | GO:0008654: phospholipid biosynthetic process | 2.80E-03 |
| 51 | GO:0015979: photosynthesis | 2.80E-03 |
| 52 | GO:0009791: post-embryonic development | 2.80E-03 |
| 53 | GO:0019761: glucosinolate biosynthetic process | 3.07E-03 |
| 54 | GO:0010583: response to cyclopentenone | 3.07E-03 |
| 55 | GO:0007267: cell-cell signaling | 3.48E-03 |
| 56 | GO:0016126: sterol biosynthetic process | 3.77E-03 |
| 57 | GO:0010029: regulation of seed germination | 3.91E-03 |
| 58 | GO:0030244: cellulose biosynthetic process | 4.52E-03 |
| 59 | GO:0018298: protein-chromophore linkage | 4.52E-03 |
| 60 | GO:0009832: plant-type cell wall biogenesis | 4.67E-03 |
| 61 | GO:0010311: lateral root formation | 4.67E-03 |
| 62 | GO:0010218: response to far red light | 4.83E-03 |
| 63 | GO:0016051: carbohydrate biosynthetic process | 5.31E-03 |
| 64 | GO:0006839: mitochondrial transport | 5.81E-03 |
| 65 | GO:0010114: response to red light | 6.32E-03 |
| 66 | GO:0035556: intracellular signal transduction | 6.72E-03 |
| 67 | GO:0009742: brassinosteroid mediated signaling pathway | 1.04E-02 |
| 68 | GO:0009414: response to water deprivation | 1.26E-02 |
| 69 | GO:0006633: fatty acid biosynthetic process | 1.37E-02 |
| 70 | GO:0045490: pectin catabolic process | 1.46E-02 |
| 71 | GO:0010468: regulation of gene expression | 1.66E-02 |
| 72 | GO:0006810: transport | 1.90E-02 |
| 73 | GO:0005975: carbohydrate metabolic process | 1.97E-02 |
| 74 | GO:0006970: response to osmotic stress | 2.10E-02 |
| 75 | GO:0080167: response to karrikin | 2.32E-02 |
| 76 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.38E-02 |
| 77 | GO:0006468: protein phosphorylation | 2.68E-02 |
| 78 | GO:0032259: methylation | 2.98E-02 |
| 79 | GO:0009408: response to heat | 3.07E-02 |
| 80 | GO:0009738: abscisic acid-activated signaling pathway | 4.51E-02 |
| 81 | GO:0009416: response to light stimulus | 4.62E-02 |
| 82 | GO:0009555: pollen development | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity | 0.00E+00 |
| 2 | GO:0016719: carotene 7,8-desaturase activity | 0.00E+00 |
| 3 | GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity | 0.00E+00 |
| 4 | GO:0030797: 24-methylenesterol C-methyltransferase activity | 2.53E-05 |
| 5 | GO:0010313: phytochrome binding | 2.53E-05 |
| 6 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 6.44E-05 |
| 7 | GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity | 6.44E-05 |
| 8 | GO:0050347: trans-octaprenyltranstransferase activity | 6.44E-05 |
| 9 | GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity | 6.44E-05 |
| 10 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 6.44E-05 |
| 11 | GO:0000064: L-ornithine transmembrane transporter activity | 6.44E-05 |
| 12 | GO:0004512: inositol-3-phosphate synthase activity | 6.44E-05 |
| 13 | GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity | 6.44E-05 |
| 14 | GO:0048531: beta-1,3-galactosyltransferase activity | 6.44E-05 |
| 15 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 1.13E-04 |
| 16 | GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity | 1.13E-04 |
| 17 | GO:0003999: adenine phosphoribosyltransferase activity | 1.69E-04 |
| 18 | GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity | 1.69E-04 |
| 19 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.69E-04 |
| 20 | GO:0048027: mRNA 5'-UTR binding | 1.69E-04 |
| 21 | GO:0000210: NAD+ diphosphatase activity | 3.65E-04 |
| 22 | GO:0016757: transferase activity, transferring glycosyl groups | 3.66E-04 |
| 23 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.30E-03 |
| 24 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.50E-03 |
| 25 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.50E-03 |
| 26 | GO:0031409: pigment binding | 1.50E-03 |
| 27 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.50E-03 |
| 28 | GO:0004176: ATP-dependent peptidase activity | 1.83E-03 |
| 29 | GO:0004707: MAP kinase activity | 1.83E-03 |
| 30 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.95E-03 |
| 31 | GO:0030570: pectate lyase activity | 2.06E-03 |
| 32 | GO:0016760: cellulose synthase (UDP-forming) activity | 2.06E-03 |
| 33 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 2.18E-03 |
| 34 | GO:0008080: N-acetyltransferase activity | 2.55E-03 |
| 35 | GO:0004518: nuclease activity | 3.07E-03 |
| 36 | GO:0004672: protein kinase activity | 3.27E-03 |
| 37 | GO:0016759: cellulose synthase activity | 3.34E-03 |
| 38 | GO:0008237: metallopeptidase activity | 3.48E-03 |
| 39 | GO:0015250: water channel activity | 3.77E-03 |
| 40 | GO:0016168: chlorophyll binding | 3.91E-03 |
| 41 | GO:0030247: polysaccharide binding | 4.21E-03 |
| 42 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.36E-03 |
| 43 | GO:0004222: metalloendopeptidase activity | 4.83E-03 |
| 44 | GO:0050661: NADP binding | 5.81E-03 |
| 45 | GO:0046872: metal ion binding | 7.49E-03 |
| 46 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.41E-03 |
| 47 | GO:0016746: transferase activity, transferring acyl groups | 1.02E-02 |
| 48 | GO:0016758: transferase activity, transferring hexosyl groups | 1.14E-02 |
| 49 | GO:0016829: lyase activity | 1.23E-02 |
| 50 | GO:0050660: flavin adenine dinucleotide binding | 2.21E-02 |
| 51 | GO:0004497: monooxygenase activity | 2.32E-02 |
| 52 | GO:0052689: carboxylic ester hydrolase activity | 2.50E-02 |
| 53 | GO:0004871: signal transducer activity | 2.73E-02 |
| 54 | GO:0005524: ATP binding | 3.62E-02 |
| 55 | GO:0016887: ATPase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009509: chromoplast | 1.13E-04 |
| 2 | GO:0005960: glycine cleavage complex | 1.69E-04 |
| 3 | GO:0048471: perinuclear region of cytoplasm | 1.01E-03 |
| 4 | GO:0019013: viral nucleocapsid | 1.20E-03 |
| 5 | GO:0030076: light-harvesting complex | 1.40E-03 |
| 6 | GO:0046658: anchored component of plasma membrane | 1.71E-03 |
| 7 | GO:0005794: Golgi apparatus | 1.84E-03 |
| 8 | GO:0009536: plastid | 2.61E-03 |
| 9 | GO:0009522: photosystem I | 2.68E-03 |
| 10 | GO:0009523: photosystem II | 2.80E-03 |
| 11 | GO:0000139: Golgi membrane | 2.95E-03 |
| 12 | GO:0009941: chloroplast envelope | 3.12E-03 |
| 13 | GO:0005743: mitochondrial inner membrane | 3.36E-03 |
| 14 | GO:0009507: chloroplast | 4.61E-03 |
| 15 | GO:0031225: anchored component of membrane | 9.94E-03 |
| 16 | GO:0010287: plastoglobule | 1.12E-02 |
| 17 | GO:0005623: cell | 1.19E-02 |
| 18 | GO:0009505: plant-type cell wall | 1.62E-02 |
| 19 | GO:0005829: cytosol | 1.88E-02 |
| 20 | GO:0005783: endoplasmic reticulum | 2.36E-02 |
| 21 | GO:0009535: chloroplast thylakoid membrane | 2.90E-02 |
| 22 | GO:0016021: integral component of membrane | 2.95E-02 |
| 23 | GO:0005887: integral component of plasma membrane | 3.82E-02 |
| 24 | GO:0016020: membrane | 4.33E-02 |
| 25 | GO:0048046: apoplast | 4.69E-02 |