co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G51110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042820: vitamin B6 catabolic process	0.00E+00
2	GO:0002184: cytoplasmic translational termination	0.00E+00
3	GO:0061635: regulation of protein complex stability	0.00E+00
4	GO:0042821: pyridoxal biosynthetic process	0.00E+00
5	GO:0009658: chloroplast organization	2.56E-08
6	GO:0015979: photosynthesis	7.67E-08
7	GO:0010027: thylakoid membrane organization	9.94E-06
8	GO:0009735: response to cytokinin	1.52E-05
9	GO:0009817: defense response to fungus, incompatible interaction	1.55E-05
10	GO:0032544: plastid translation	1.57E-05
11	GO:0018119: peptidyl-cysteine S-nitrosylation	3.56E-05
12	GO:0009443: pyridoxal 5'-phosphate salvage	3.77E-05
13	GO:0043686: co-translational protein modification	3.77E-05
14	GO:0071277: cellular response to calcium ion	3.77E-05
15	GO:0010207: photosystem II assembly	5.65E-05
16	GO:0006412: translation	8.50E-05
17	GO:0030388: fructose 1,6-bisphosphate metabolic process	9.40E-05
18	GO:0071492: cellular response to UV-A	1.63E-04
19	GO:0006000: fructose metabolic process	1.63E-04
20	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.21E-04
21	GO:0071484: cellular response to light intensity	2.40E-04
22	GO:2000122: negative regulation of stomatal complex development	3.24E-04
23	GO:0010037: response to carbon dioxide	3.24E-04
24	GO:0015976: carbon utilization	3.24E-04
25	GO:0071486: cellular response to high light intensity	3.24E-04
26	GO:0045727: positive regulation of translation	3.24E-04
27	GO:0042254: ribosome biogenesis	3.73E-04
28	GO:0006564: L-serine biosynthetic process	4.13E-04
29	GO:0010236: plastoquinone biosynthetic process	4.13E-04
30	GO:0031365: N-terminal protein amino acid modification	4.13E-04
31	GO:0010189: vitamin E biosynthetic process	6.05E-04
32	GO:0042742: defense response to bacterium	6.63E-04
33	GO:0006400: tRNA modification	7.07E-04
34	GO:0009395: phospholipid catabolic process	7.07E-04
35	GO:0009704: de-etiolation	8.13E-04
36	GO:0006364: rRNA processing	8.97E-04
37	GO:0006002: fructose 6-phosphate metabolic process	9.23E-04
38	GO:0010206: photosystem II repair	1.04E-03
39	GO:0090333: regulation of stomatal closure	1.04E-03
40	GO:0006949: syncytium formation	1.28E-03
41	GO:0009073: aromatic amino acid family biosynthetic process	1.40E-03
42	GO:0009773: photosynthetic electron transport in photosystem I	1.40E-03
43	GO:0006094: gluconeogenesis	1.67E-03
44	GO:0005986: sucrose biosynthetic process	1.67E-03
45	GO:0009790: embryo development	1.81E-03
46	GO:0019253: reductive pentose-phosphate cycle	1.81E-03
47	GO:0005985: sucrose metabolic process	1.95E-03
48	GO:0009768: photosynthesis, light harvesting in photosystem I	2.40E-03
49	GO:0019953: sexual reproduction	2.40E-03
50	GO:0009306: protein secretion	3.05E-03
51	GO:0009791: post-embryonic development	3.94E-03
52	GO:0010583: response to cyclopentenone	4.32E-03
53	GO:0009828: plant-type cell wall loosening	4.70E-03
54	GO:0045454: cell redox homeostasis	4.84E-03
55	GO:0055114: oxidation-reduction process	5.00E-03
56	GO:0009409: response to cold	5.64E-03
57	GO:0018298: protein-chromophore linkage	6.38E-03
58	GO:0010218: response to far red light	6.82E-03
59	GO:0010119: regulation of stomatal movement	7.05E-03
60	GO:0009637: response to blue light	7.51E-03
61	GO:0010114: response to red light	8.96E-03
62	GO:0009644: response to high light intensity	9.47E-03
63	GO:0009664: plant-type cell wall organization	1.05E-02
64	GO:0009793: embryo development ending in seed dormancy	1.11E-02
65	GO:0009809: lignin biosynthetic process	1.11E-02
66	GO:0009845: seed germination	1.76E-02
67	GO:0042744: hydrogen peroxide catabolic process	1.82E-02
68	GO:0006633: fatty acid biosynthetic process	1.95E-02
69	GO:0009826: unidimensional cell growth	2.78E-02
70	GO:0032259: methylation	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
2	GO:1990534: thermospermine oxidase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
5	GO:0019843: rRNA binding	1.26E-07
6	GO:0051920: peroxiredoxin activity	6.56E-06
7	GO:0016209: antioxidant activity	1.21E-05
8	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	3.77E-05
9	GO:0042586: peptide deformylase activity	3.77E-05
10	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	9.40E-05
11	GO:0004617: phosphoglycerate dehydrogenase activity	9.40E-05
12	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	9.40E-05
13	GO:0070402: NADPH binding	1.63E-04
14	GO:0043023: ribosomal large subunit binding	2.40E-04
15	GO:0016168: chlorophyll binding	3.42E-04
16	GO:0004601: peroxidase activity	3.64E-04
17	GO:0052747: sinapyl alcohol dehydrogenase activity	8.13E-04
18	GO:0004033: aldo-keto reductase (NADP) activity	8.13E-04
19	GO:0008135: translation factor activity, RNA binding	9.23E-04
20	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.53E-03
21	GO:0004089: carbonate dehydratase activity	1.67E-03
22	GO:0031072: heat shock protein binding	1.67E-03
23	GO:0008131: primary amine oxidase activity	1.81E-03
24	GO:0008266: poly(U) RNA binding	1.81E-03
25	GO:0003735: structural constituent of ribosome	1.86E-03
26	GO:0031409: pigment binding	2.10E-03
27	GO:0022891: substrate-specific transmembrane transporter activity	2.89E-03
28	GO:0050662: coenzyme binding	3.76E-03
29	GO:0016597: amino acid binding	5.11E-03
30	GO:0003924: GTPase activity	5.96E-03
31	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.16E-03
32	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.38E-03
33	GO:0003746: translation elongation factor activity	7.51E-03
34	GO:0003993: acid phosphatase activity	7.75E-03
35	GO:0051539: 4 iron, 4 sulfur cluster binding	8.23E-03
36	GO:0051287: NAD binding	1.02E-02
37	GO:0051082: unfolded protein binding	1.42E-02
38	GO:0005525: GTP binding	1.74E-02
39	GO:0004252: serine-type endopeptidase activity	1.79E-02
40	GO:0046872: metal ion binding	2.07E-02
41	GO:0008168: methyltransferase activity	2.78E-02
42	GO:0000287: magnesium ion binding	2.81E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.89E-02
44	GO:0003729: mRNA binding	3.20E-02
45	GO:0004871: signal transducer activity	3.91E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	2.57E-26
2	GO:0009570: chloroplast stroma	6.28E-19
3	GO:0009579: thylakoid	5.41E-14
4	GO:0009535: chloroplast thylakoid membrane	1.11E-13
5	GO:0009941: chloroplast envelope	5.28E-13
6	GO:0009534: chloroplast thylakoid	1.76E-06
7	GO:0010319: stromule	8.13E-06
8	GO:0030095: chloroplast photosystem II	5.65E-05
9	GO:0009654: photosystem II oxygen evolving complex	9.26E-05
10	GO:0009706: chloroplast inner membrane	9.35E-05
11	GO:0005840: ribosome	1.01E-04
12	GO:0048046: apoplast	2.12E-04
13	GO:0009840: chloroplastic endopeptidase Clp complex	6.05E-04
14	GO:0009539: photosystem II reaction center	9.23E-04
15	GO:0010287: plastoglobule	1.48E-03
16	GO:0009543: chloroplast thylakoid lumen	1.56E-03
17	GO:0030076: light-harvesting complex	1.95E-03
18	GO:0015935: small ribosomal subunit	2.56E-03
19	GO:0009532: plastid stroma	2.56E-03
20	GO:0009522: photosystem I	3.76E-03
21	GO:0009523: photosystem II	3.94E-03
22	GO:0019898: extrinsic component of membrane	3.94E-03
23	GO:0009536: plastid	4.98E-03
24	GO:0015934: large ribosomal subunit	7.05E-03
25	GO:0031977: thylakoid lumen	8.47E-03
26	GO:0046658: anchored component of plasma membrane	2.55E-02
27	GO:0016020: membrane	4.16E-02