co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043171: peptide catabolic process	0.00E+00
2	GO:0010219: regulation of vernalization response	0.00E+00
3	GO:0010478: chlororespiration	0.00E+00
4	GO:0042906: xanthine transport	0.00E+00
5	GO:0044249: cellular biosynthetic process	0.00E+00
6	GO:0009817: defense response to fungus, incompatible interaction	6.25E-05
7	GO:0070574: cadmium ion transmembrane transport	7.39E-05
8	GO:0055071: manganese ion homeostasis	7.39E-05
9	GO:0032958: inositol phosphate biosynthetic process	7.39E-05
10	GO:0006369: termination of RNA polymerase II transcription	7.39E-05
11	GO:0015720: allantoin transport	1.77E-04
12	GO:0048833: specification of floral organ number	1.77E-04
13	GO:0034755: iron ion transmembrane transport	1.77E-04
14	GO:0015857: uracil transport	1.77E-04
15	GO:1902000: homogentisate catabolic process	1.77E-04
16	GO:0030029: actin filament-based process	2.99E-04
17	GO:0015692: lead ion transport	2.99E-04
18	GO:0009072: aromatic amino acid family metabolic process	2.99E-04
19	GO:0071705: nitrogen compound transport	2.99E-04
20	GO:0042344: indole glucosinolate catabolic process	2.99E-04
21	GO:0006572: tyrosine catabolic process	4.32E-04
22	GO:0006020: inositol metabolic process	4.32E-04
23	GO:0010601: positive regulation of auxin biosynthetic process	4.32E-04
24	GO:0015749: monosaccharide transport	4.32E-04
25	GO:1901332: negative regulation of lateral root development	4.32E-04
26	GO:0009737: response to abscisic acid	4.65E-04
27	GO:0009414: response to water deprivation	5.00E-04
28	GO:0006646: phosphatidylethanolamine biosynthetic process	5.75E-04
29	GO:0071421: manganese ion transmembrane transport	5.75E-04
30	GO:0048442: sepal development	5.75E-04
31	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	5.75E-04
32	GO:0010286: heat acclimation	6.76E-04
33	GO:0016926: protein desumoylation	7.29E-04
34	GO:0043097: pyrimidine nucleoside salvage	7.29E-04
35	GO:0015691: cadmium ion transport	8.91E-04
36	GO:0006828: manganese ion transport	8.91E-04
37	GO:0006206: pyrimidine nucleobase metabolic process	8.91E-04
38	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.06E-03
39	GO:0019509: L-methionine salvage from methylthioadenosine	1.06E-03
40	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.06E-03
41	GO:0045926: negative regulation of growth	1.06E-03
42	GO:0009651: response to salt stress	1.14E-03
43	GO:0010038: response to metal ion	1.24E-03
44	GO:0098869: cellular oxidant detoxification	1.24E-03
45	GO:0048437: floral organ development	1.24E-03
46	GO:0030001: metal ion transport	1.38E-03
47	GO:0009819: drought recovery	1.43E-03
48	GO:0006875: cellular metal ion homeostasis	1.43E-03
49	GO:0009415: response to water	1.43E-03
50	GO:0046916: cellular transition metal ion homeostasis	1.83E-03
51	GO:0007165: signal transduction	1.88E-03
52	GO:0051603: proteolysis involved in cellular protein catabolic process	2.16E-03
53	GO:0048441: petal development	2.28E-03
54	GO:0009682: induced systemic resistance	2.51E-03
55	GO:0052544: defense response by callose deposition in cell wall	2.51E-03
56	GO:0016925: protein sumoylation	2.75E-03
57	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.00E-03
58	GO:0048440: carpel development	3.25E-03
59	GO:0007034: vacuolar transport	3.25E-03
60	GO:0071732: cellular response to nitric oxide	3.51E-03
61	GO:0009409: response to cold	4.00E-03
62	GO:0016575: histone deacetylation	4.34E-03
63	GO:0009695: jasmonic acid biosynthetic process	4.34E-03
64	GO:0009269: response to desiccation	4.63E-03
65	GO:0007623: circadian rhythm	5.06E-03
66	GO:0035556: intracellular signal transduction	5.16E-03
67	GO:0071369: cellular response to ethylene stimulus	5.23E-03
68	GO:0048443: stamen development	5.54E-03
69	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.86E-03
70	GO:0009617: response to bacterium	6.03E-03
71	GO:0000226: microtubule cytoskeleton organization	6.18E-03
72	GO:0046323: glucose import	6.51E-03
73	GO:0009556: microsporogenesis	7.19E-03
74	GO:0055072: iron ion homeostasis	7.19E-03
75	GO:0008654: phospholipid biosynthetic process	7.19E-03
76	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	7.53E-03
77	GO:0006635: fatty acid beta-oxidation	7.53E-03
78	GO:0071281: cellular response to iron ion	8.25E-03
79	GO:0006970: response to osmotic stress	8.42E-03
80	GO:0019760: glucosinolate metabolic process	8.61E-03
81	GO:0010029: regulation of seed germination	1.01E-02
82	GO:0008219: cell death	1.17E-02
83	GO:0006979: response to oxidative stress	1.19E-02
84	GO:0006811: ion transport	1.26E-02
85	GO:0009631: cold acclimation	1.30E-02
86	GO:0016051: carbohydrate biosynthetic process	1.39E-02
87	GO:0009408: response to heat	1.44E-02
88	GO:0042542: response to hydrogen peroxide	1.61E-02
89	GO:0009926: auxin polar transport	1.66E-02
90	GO:0000209: protein polyubiquitination	1.71E-02
91	GO:0009644: response to high light intensity	1.76E-02
92	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.90E-02
93	GO:0000165: MAPK cascade	1.90E-02
94	GO:0009738: abscisic acid-activated signaling pathway	2.47E-02
95	GO:0009553: embryo sac development	2.58E-02
96	GO:0051726: regulation of cell cycle	2.75E-02
97	GO:0045893: positive regulation of transcription, DNA-templated	2.93E-02
98	GO:0009058: biosynthetic process	3.21E-02
99	GO:0009845: seed germination	3.27E-02
100	GO:0006952: defense response	3.32E-02
101	GO:0006413: translational initiation	3.70E-02
102	GO:0010228: vegetative to reproductive phase transition of meristem	4.02E-02
103	GO:0009739: response to gibberellin	4.22E-02
104	GO:0006470: protein dephosphorylation	4.28E-02
105	GO:0010468: regulation of gene expression	4.41E-02
106	GO:0006508: proteolysis	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
2	GO:0004334: fumarylacetoacetase activity	0.00E+00
3	GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity	0.00E+00
4	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
5	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	7.39E-05
6	GO:0009679: hexose:proton symporter activity	7.39E-05
7	GO:0000829: inositol heptakisphosphate kinase activity	7.39E-05
8	GO:0010013: N-1-naphthylphthalamic acid binding	7.39E-05
9	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	7.39E-05
10	GO:0046870: cadmium ion binding	7.39E-05
11	GO:0000828: inositol hexakisphosphate kinase activity	7.39E-05
12	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	7.39E-05
13	GO:0070006: metalloaminopeptidase activity	7.39E-05
14	GO:0032791: lead ion binding	1.77E-04
15	GO:0005274: allantoin uptake transmembrane transporter activity	1.77E-04
16	GO:0004609: phosphatidylserine decarboxylase activity	1.77E-04
17	GO:0047216: inositol 3-alpha-galactosyltransferase activity	1.77E-04
18	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.77E-04
19	GO:0019948: SUMO activating enzyme activity	2.99E-04
20	GO:0017150: tRNA dihydrouridine synthase activity	2.99E-04
21	GO:0004165: dodecenoyl-CoA delta-isomerase activity	4.32E-04
22	GO:0004300: enoyl-CoA hydratase activity	4.32E-04
23	GO:0015086: cadmium ion transmembrane transporter activity	4.32E-04
24	GO:0015210: uracil transmembrane transporter activity	5.75E-04
25	GO:0005253: anion channel activity	5.75E-04
26	GO:0042277: peptide binding	5.75E-04
27	GO:0016929: SUMO-specific protease activity	7.29E-04
28	GO:0015145: monosaccharide transmembrane transporter activity	7.29E-04
29	GO:0005247: voltage-gated chloride channel activity	8.91E-04
30	GO:0004629: phospholipase C activity	8.91E-04
31	GO:0000293: ferric-chelate reductase activity	8.91E-04
32	GO:0019137: thioglucosidase activity	8.91E-04
33	GO:0004849: uridine kinase activity	1.06E-03
34	GO:0004602: glutathione peroxidase activity	1.06E-03
35	GO:0004435: phosphatidylinositol phospholipase C activity	1.06E-03
36	GO:0015103: inorganic anion transmembrane transporter activity	1.24E-03
37	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.63E-03
38	GO:0001104: RNA polymerase II transcription cofactor activity	1.63E-03
39	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.83E-03
40	GO:0005381: iron ion transmembrane transporter activity	2.05E-03
41	GO:0005384: manganese ion transmembrane transporter activity	2.05E-03
42	GO:0008234: cysteine-type peptidase activity	2.30E-03
43	GO:0004177: aminopeptidase activity	2.51E-03
44	GO:0031624: ubiquitin conjugating enzyme binding	3.25E-03
45	GO:0004175: endopeptidase activity	3.25E-03
46	GO:0004407: histone deacetylase activity	4.06E-03
47	GO:0019706: protein-cysteine S-palmitoyltransferase activity	4.63E-03
48	GO:0004707: MAP kinase activity	4.63E-03
49	GO:0046873: metal ion transmembrane transporter activity	6.51E-03
50	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	6.51E-03
51	GO:0016853: isomerase activity	6.84E-03
52	GO:0004197: cysteine-type endopeptidase activity	7.89E-03
53	GO:0005200: structural constituent of cytoskeleton	8.98E-03
54	GO:0102483: scopolin beta-glucosidase activity	1.09E-02
55	GO:0005096: GTPase activator activity	1.22E-02
56	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.26E-02
57	GO:0003824: catalytic activity	1.33E-02
58	GO:0008422: beta-glucosidase activity	1.48E-02
59	GO:0016758: transferase activity, transferring hexosyl groups	3.04E-02
60	GO:0015144: carbohydrate transmembrane transporter activity	3.52E-02
61	GO:0005351: sugar:proton symporter activity	3.83E-02
62	GO:0003743: translation initiation factor activity	4.35E-02
63	GO:0005509: calcium ion binding	4.74E-02
64	GO:0046872: metal ion binding	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0000323: lytic vacuole	4.32E-04
2	GO:0032586: protein storage vacuole membrane	5.75E-04
3	GO:0070847: core mediator complex	8.91E-04
4	GO:0005851: eukaryotic translation initiation factor 2B complex	8.91E-04
5	GO:0034707: chloride channel complex	8.91E-04
6	GO:0000815: ESCRT III complex	1.06E-03
7	GO:0000326: protein storage vacuole	1.63E-03
8	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	1.63E-03
9	GO:0031090: organelle membrane	1.83E-03
10	GO:0005764: lysosome	3.25E-03
11	GO:0005886: plasma membrane	4.49E-03
12	GO:0005777: peroxisome	5.74E-03
13	GO:0005737: cytoplasm	6.34E-03
14	GO:0031965: nuclear membrane	7.19E-03
15	GO:0016592: mediator complex	7.89E-03
16	GO:0000151: ubiquitin ligase complex	1.17E-02
17	GO:0031966: mitochondrial membrane	1.95E-02
18	GO:0016607: nuclear speck	2.37E-02
19	GO:0005802: trans-Golgi network	4.08E-02
20	GO:0005615: extracellular space	4.22E-02
21	GO:0005622: intracellular	4.52E-02