co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G49460

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0010583: response to cyclopentenone	6.47E-05
4	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	6.90E-05
5	GO:0007155: cell adhesion	7.12E-05
6	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	1.16E-04
7	GO:0010442: guard cell morphogenesis	1.16E-04
8	GO:0071370: cellular response to gibberellin stimulus	1.16E-04
9	GO:0042371: vitamin K biosynthetic process	1.16E-04
10	GO:0006434: seryl-tRNA aminoacylation	1.16E-04
11	GO:0060627: regulation of vesicle-mediated transport	1.16E-04
12	GO:0006631: fatty acid metabolic process	2.66E-04
13	GO:0010424: DNA methylation on cytosine within a CG sequence	2.69E-04
14	GO:0043039: tRNA aminoacylation	2.69E-04
15	GO:0052541: plant-type cell wall cellulose metabolic process	2.69E-04
16	GO:0006695: cholesterol biosynthetic process	2.69E-04
17	GO:0010069: zygote asymmetric cytokinesis in embryo sac	2.69E-04
18	GO:0060919: auxin influx	2.69E-04
19	GO:0007010: cytoskeleton organization	3.91E-04
20	GO:0009294: DNA mediated transformation	5.64E-04
21	GO:0007231: osmosensory signaling pathway	6.38E-04
22	GO:0051016: barbed-end actin filament capping	6.38E-04
23	GO:0000271: polysaccharide biosynthetic process	7.13E-04
24	GO:0042335: cuticle development	7.13E-04
25	GO:0045489: pectin biosynthetic process	7.67E-04
26	GO:0033500: carbohydrate homeostasis	8.47E-04
27	GO:0015976: carbon utilization	8.47E-04
28	GO:0009765: photosynthesis, light harvesting	8.47E-04
29	GO:0006183: GTP biosynthetic process	8.47E-04
30	GO:0016123: xanthophyll biosynthetic process	1.07E-03
31	GO:0048359: mucilage metabolic process involved in seed coat development	1.07E-03
32	GO:0016120: carotene biosynthetic process	1.07E-03
33	GO:0006796: phosphate-containing compound metabolic process	1.31E-03
34	GO:0045490: pectin catabolic process	1.34E-03
35	GO:0071555: cell wall organization	1.51E-03
36	GO:0042372: phylloquinone biosynthetic process	1.56E-03
37	GO:0006694: steroid biosynthetic process	1.56E-03
38	GO:0010555: response to mannitol	1.56E-03
39	GO:0048481: plant ovule development	1.73E-03
40	GO:0009834: plant-type secondary cell wall biogenesis	1.90E-03
41	GO:0009690: cytokinin metabolic process	2.13E-03
42	GO:0045010: actin nucleation	2.13E-03
43	GO:0009642: response to light intensity	2.13E-03
44	GO:0016051: carbohydrate biosynthetic process	2.18E-03
45	GO:0009808: lignin metabolic process	2.43E-03
46	GO:0009932: cell tip growth	2.43E-03
47	GO:0033384: geranyl diphosphate biosynthetic process	2.74E-03
48	GO:0006754: ATP biosynthetic process	2.74E-03
49	GO:0048589: developmental growth	2.74E-03
50	GO:0015780: nucleotide-sugar transport	2.74E-03
51	GO:0045337: farnesyl diphosphate biosynthetic process	2.74E-03
52	GO:0042761: very long-chain fatty acid biosynthetic process	3.07E-03
53	GO:0006349: regulation of gene expression by genetic imprinting	3.07E-03
54	GO:0043069: negative regulation of programmed cell death	3.41E-03
55	GO:0048829: root cap development	3.41E-03
56	GO:0010216: maintenance of DNA methylation	3.76E-03
57	GO:0006816: calcium ion transport	3.76E-03
58	GO:0006790: sulfur compound metabolic process	4.13E-03
59	GO:0006869: lipid transport	4.31E-03
60	GO:0030036: actin cytoskeleton organization	4.50E-03
61	GO:0050826: response to freezing	4.50E-03
62	GO:0070588: calcium ion transmembrane transport	5.29E-03
63	GO:0046854: phosphatidylinositol phosphorylation	5.29E-03
64	GO:0009969: xyloglucan biosynthetic process	5.29E-03
65	GO:0005985: sucrose metabolic process	5.29E-03
66	GO:0010025: wax biosynthetic process	5.70E-03
67	GO:0006071: glycerol metabolic process	5.70E-03
68	GO:0019344: cysteine biosynthetic process	6.12E-03
69	GO:0042742: defense response to bacterium	6.32E-03
70	GO:0006418: tRNA aminoacylation for protein translation	6.56E-03
71	GO:0010026: trichome differentiation	6.56E-03
72	GO:0007017: microtubule-based process	6.56E-03
73	GO:0003333: amino acid transmembrane transport	7.00E-03
74	GO:0007005: mitochondrion organization	7.46E-03
75	GO:0006633: fatty acid biosynthetic process	8.39E-03
76	GO:0019722: calcium-mediated signaling	8.40E-03
77	GO:0016117: carotenoid biosynthetic process	8.88E-03
78	GO:0080022: primary root development	9.38E-03
79	GO:0000413: protein peptidyl-prolyl isomerization	9.38E-03
80	GO:0009617: response to bacterium	1.10E-02
81	GO:0016132: brassinosteroid biosynthetic process	1.15E-02
82	GO:0071554: cell wall organization or biogenesis	1.15E-02
83	GO:0005975: carbohydrate metabolic process	1.19E-02
84	GO:0032502: developmental process	1.20E-02
85	GO:1901657: glycosyl compound metabolic process	1.26E-02
86	GO:0007267: cell-cell signaling	1.37E-02
87	GO:0071805: potassium ion transmembrane transport	1.37E-02
88	GO:0055085: transmembrane transport	1.40E-02
89	GO:0009607: response to biotic stimulus	1.55E-02
90	GO:0010411: xyloglucan metabolic process	1.67E-02
91	GO:0008219: cell death	1.80E-02
92	GO:0048767: root hair elongation	1.86E-02
93	GO:0009813: flavonoid biosynthetic process	1.86E-02
94	GO:0010311: lateral root formation	1.86E-02
95	GO:0009910: negative regulation of flower development	1.99E-02
96	GO:0006865: amino acid transport	2.06E-02
97	GO:0045454: cell redox homeostasis	2.13E-02
98	GO:0006839: mitochondrial transport	2.33E-02
99	GO:0009926: auxin polar transport	2.54E-02
100	GO:0042546: cell wall biogenesis	2.62E-02
101	GO:0008643: carbohydrate transport	2.69E-02
102	GO:0042538: hyperosmotic salinity response	2.99E-02
103	GO:0006813: potassium ion transport	3.15E-02
104	GO:0051603: proteolysis involved in cellular protein catabolic process	3.22E-02
105	GO:0006508: proteolysis	3.39E-02
106	GO:0048367: shoot system development	3.63E-02
107	GO:0016569: covalent chromatin modification	3.87E-02
108	GO:0042545: cell wall modification	3.96E-02
109	GO:0009742: brassinosteroid mediated signaling pathway	4.21E-02

Rank	GO Term	Adjusted P value
1	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
4	GO:0050614: delta24-sterol reductase activity	0.00E+00
5	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
6	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
7	GO:0051920: peroxiredoxin activity	4.06E-05
8	GO:0016209: antioxidant activity	7.12E-05
9	GO:0016722: oxidoreductase activity, oxidizing metal ions	8.60E-05
10	GO:0009374: biotin binding	1.16E-04
11	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.16E-04
12	GO:0004828: serine-tRNA ligase activity	1.16E-04
13	GO:0080132: fatty acid alpha-hydroxylase activity	1.16E-04
14	GO:0003938: IMP dehydrogenase activity	2.69E-04
15	GO:0005504: fatty acid binding	4.45E-04
16	GO:0070330: aromatase activity	4.45E-04
17	GO:0002161: aminoacyl-tRNA editing activity	4.45E-04
18	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.19E-04
19	GO:0030570: pectate lyase activity	5.64E-04
20	GO:0045430: chalcone isomerase activity	8.47E-04
21	GO:0010328: auxin influx transmembrane transporter activity	8.47E-04
22	GO:0018685: alkane 1-monooxygenase activity	1.07E-03
23	GO:0003989: acetyl-CoA carboxylase activity	1.07E-03
24	GO:0005200: structural constituent of cytoskeleton	1.19E-03
25	GO:0016208: AMP binding	1.31E-03
26	GO:0016462: pyrophosphatase activity	1.31E-03
27	GO:0051753: mannan synthase activity	1.56E-03
28	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.56E-03
29	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	1.56E-03
30	GO:0004427: inorganic diphosphatase activity	1.84E-03
31	GO:0004564: beta-fructofuranosidase activity	2.13E-03
32	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	2.74E-03
33	GO:0004337: geranyltranstransferase activity	2.74E-03
34	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.74E-03
35	GO:0004672: protein kinase activity	2.96E-03
36	GO:0004575: sucrose alpha-glucosidase activity	3.07E-03
37	GO:0004161: dimethylallyltranstransferase activity	3.76E-03
38	GO:0008378: galactosyltransferase activity	4.13E-03
39	GO:0000049: tRNA binding	4.13E-03
40	GO:0004089: carbonate dehydratase activity	4.50E-03
41	GO:0005262: calcium channel activity	4.50E-03
42	GO:0004565: beta-galactosidase activity	4.50E-03
43	GO:0004650: polygalacturonase activity	4.87E-03
44	GO:0030599: pectinesterase activity	5.02E-03
45	GO:0004857: enzyme inhibitor activity	6.12E-03
46	GO:0016758: transferase activity, transferring hexosyl groups	6.50E-03
47	GO:0015079: potassium ion transmembrane transporter activity	6.56E-03
48	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.00E-03
49	GO:0008289: lipid binding	7.60E-03
50	GO:0008514: organic anion transmembrane transporter activity	8.40E-03
51	GO:0004812: aminoacyl-tRNA ligase activity	8.88E-03
52	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.15E-02
53	GO:0051015: actin filament binding	1.26E-02
54	GO:0016413: O-acetyltransferase activity	1.43E-02
55	GO:0004601: peroxidase activity	1.43E-02
56	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.47E-02
57	GO:0005507: copper ion binding	1.62E-02
58	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.67E-02
59	GO:0102483: scopolin beta-glucosidase activity	1.67E-02
60	GO:0005516: calmodulin binding	1.74E-02
61	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.99E-02
62	GO:0008422: beta-glucosidase activity	2.26E-02
63	GO:0004674: protein serine/threonine kinase activity	2.40E-02
64	GO:0004185: serine-type carboxypeptidase activity	2.54E-02
65	GO:0003924: GTPase activity	2.62E-02
66	GO:0015293: symporter activity	2.76E-02
67	GO:0003824: catalytic activity	2.84E-02
68	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.84E-02
69	GO:0015171: amino acid transmembrane transporter activity	3.38E-02
70	GO:0045330: aspartyl esterase activity	3.38E-02
71	GO:0045735: nutrient reservoir activity	3.54E-02
72	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.63E-02
73	GO:0022857: transmembrane transporter activity	3.87E-02
74	GO:0016757: transferase activity, transferring glycosyl groups	3.92E-02
75	GO:0003779: actin binding	3.96E-02
76	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	2.51E-12
2	GO:0009505: plant-type cell wall	9.28E-10
3	GO:0031225: anchored component of membrane	1.04E-09
4	GO:0005618: cell wall	5.87E-09
5	GO:0048046: apoplast	3.44E-08
6	GO:0005576: extracellular region	1.03E-06
7	GO:0005886: plasma membrane	2.78E-06
8	GO:0009506: plasmodesma	1.28E-04
9	GO:0000139: Golgi membrane	1.37E-04
10	GO:0005774: vacuolar membrane	3.44E-04
11	GO:0005794: Golgi apparatus	3.78E-04
12	GO:0009317: acetyl-CoA carboxylase complex	4.45E-04
13	GO:0005775: vacuolar lumen	6.38E-04
14	GO:0016021: integral component of membrane	9.99E-04
15	GO:0005802: trans-Golgi network	1.01E-03
16	GO:0005768: endosome	1.25E-03
17	GO:0009533: chloroplast stromal thylakoid	1.84E-03
18	GO:0000325: plant-type vacuole	1.99E-03
19	GO:0016020: membrane	2.26E-03
20	GO:0045298: tubulin complex	2.74E-03
21	GO:0005773: vacuole	3.08E-03
22	GO:0009570: chloroplast stroma	4.86E-03
23	GO:0030659: cytoplasmic vesicle membrane	4.89E-03
24	GO:0005875: microtubule associated complex	5.70E-03
25	GO:0009941: chloroplast envelope	7.40E-03
26	GO:0005778: peroxisomal membrane	1.37E-02
27	GO:0010319: stromule	1.37E-02
28	GO:0005874: microtubule	1.71E-02
29	GO:0031969: chloroplast membrane	1.78E-02
30	GO:0031902: late endosome membrane	2.40E-02
31	GO:0031977: thylakoid lumen	2.40E-02
32	GO:0005856: cytoskeleton	2.76E-02
33	GO:0005783: endoplasmic reticulum	4.28E-02
34	GO:0010287: plastoglobule	4.56E-02
35	GO:0009543: chloroplast thylakoid lumen	4.74E-02