Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G48850

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006971: hypotonic response0.00E+00
2GO:0034484: raffinose catabolic process0.00E+00
3GO:0010200: response to chitin5.89E-09
4GO:0009751: response to salicylic acid4.79E-07
5GO:0010411: xyloglucan metabolic process3.36E-06
6GO:0009741: response to brassinosteroid3.00E-05
7GO:0009737: response to abscisic acid4.56E-05
8GO:0030162: regulation of proteolysis5.57E-05
9GO:0050691: regulation of defense response to virus by host9.88E-05
10GO:0033481: galacturonate biosynthetic process9.88E-05
11GO:0051973: positive regulation of telomerase activity9.88E-05
12GO:0080164: regulation of nitric oxide metabolic process9.88E-05
13GO:0055063: sulfate ion homeostasis9.88E-05
14GO:0046500: S-adenosylmethionine metabolic process9.88E-05
15GO:0009753: response to jasmonic acid1.08E-04
16GO:0042542: response to hydrogen peroxide2.10E-04
17GO:2000693: positive regulation of seed maturation2.32E-04
18GO:0071497: cellular response to freezing2.32E-04
19GO:0051592: response to calcium ion2.32E-04
20GO:0042546: cell wall biogenesis2.34E-04
21GO:0009738: abscisic acid-activated signaling pathway2.75E-04
22GO:0010581: regulation of starch biosynthetic process3.86E-04
23GO:0080168: abscisic acid transport3.86E-04
24GO:2000022: regulation of jasmonic acid mediated signaling pathway4.20E-04
25GO:0040007: growth4.58E-04
26GO:0019722: calcium-mediated signaling4.98E-04
27GO:0009743: response to carbohydrate5.54E-04
28GO:1902358: sulfate transmembrane transport5.54E-04
29GO:0000271: polysaccharide biosynthetic process5.80E-04
30GO:0046345: abscisic acid catabolic process7.37E-04
31GO:0006544: glycine metabolic process9.32E-04
32GO:0010438: cellular response to sulfur starvation9.32E-04
33GO:0007267: cell-cell signaling9.73E-04
34GO:0009414: response to water deprivation9.92E-04
35GO:0006357: regulation of transcription from RNA polymerase II promoter1.01E-03
36GO:0006355: regulation of transcription, DNA-templated1.01E-03
37GO:0009267: cellular response to starvation1.14E-03
38GO:1902456: regulation of stomatal opening1.14E-03
39GO:0006563: L-serine metabolic process1.14E-03
40GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.15E-03
41GO:0030154: cell differentiation1.20E-03
42GO:0009733: response to auxin1.26E-03
43GO:0048573: photoperiodism, flowering1.27E-03
44GO:0009612: response to mechanical stimulus1.36E-03
45GO:0050829: defense response to Gram-negative bacterium1.59E-03
46GO:0051510: regulation of unidimensional cell growth1.59E-03
47GO:0010038: response to metal ion1.59E-03
48GO:0035265: organ growth1.84E-03
49GO:0010439: regulation of glucosinolate biosynthetic process1.84E-03
50GO:2000070: regulation of response to water deprivation1.84E-03
51GO:0016567: protein ubiquitination2.05E-03
52GO:0048574: long-day photoperiodism, flowering2.10E-03
53GO:0044030: regulation of DNA methylation2.10E-03
54GO:2000031: regulation of salicylic acid mediated signaling pathway2.10E-03
55GO:0010099: regulation of photomorphogenesis2.10E-03
56GO:0009723: response to ethylene2.13E-03
57GO:0019432: triglyceride biosynthetic process2.37E-03
58GO:0051865: protein autoubiquitination2.37E-03
59GO:0009638: phototropism2.65E-03
60GO:0035999: tetrahydrofolate interconversion2.65E-03
61GO:0031347: regulation of defense response2.73E-03
62GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.73E-03
63GO:0043069: negative regulation of programmed cell death2.95E-03
64GO:0009585: red, far-red light phototransduction3.04E-03
65GO:1903507: negative regulation of nucleic acid-templated transcription3.25E-03
66GO:0000272: polysaccharide catabolic process3.25E-03
67GO:0010015: root morphogenesis3.25E-03
68GO:0000038: very long-chain fatty acid metabolic process3.25E-03
69GO:0016925: protein sumoylation3.57E-03
70GO:0018107: peptidyl-threonine phosphorylation3.89E-03
71GO:0009718: anthocyanin-containing compound biosynthetic process3.89E-03
72GO:0034605: cellular response to heat4.22E-03
73GO:0002237: response to molecule of bacterial origin4.22E-03
74GO:0010540: basipetal auxin transport4.22E-03
75GO:0009742: brassinosteroid mediated signaling pathway4.56E-03
76GO:0010167: response to nitrate4.57E-03
77GO:0005985: sucrose metabolic process4.57E-03
78GO:0009969: xyloglucan biosynthetic process4.57E-03
79GO:0009225: nucleotide-sugar metabolic process4.57E-03
80GO:0006636: unsaturated fatty acid biosynthetic process4.92E-03
81GO:0009873: ethylene-activated signaling pathway5.25E-03
82GO:2000377: regulation of reactive oxygen species metabolic process5.28E-03
83GO:0016998: cell wall macromolecule catabolic process6.03E-03
84GO:0010017: red or far-red light signaling pathway6.42E-03
85GO:0009831: plant-type cell wall modification involved in multidimensional cell growth6.82E-03
86GO:0009409: response to cold7.20E-03
87GO:0007623: circadian rhythm7.43E-03
88GO:0010118: stomatal movement8.07E-03
89GO:0009611: response to wounding8.08E-03
90GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.31E-03
91GO:0009739: response to gibberellin8.31E-03
92GO:0035556: intracellular signal transduction8.42E-03
93GO:0045489: pectin biosynthetic process8.50E-03
94GO:0009958: positive gravitropism8.50E-03
95GO:0010182: sugar mediated signaling pathway8.50E-03
96GO:0010268: brassinosteroid homeostasis8.50E-03
97GO:0009651: response to salt stress8.56E-03
98GO:0009646: response to absence of light8.94E-03
99GO:0045893: positive regulation of transcription, DNA-templated9.37E-03
100GO:0009791: post-embryonic development9.39E-03
101GO:0002229: defense response to oomycetes9.85E-03
102GO:0016132: brassinosteroid biosynthetic process9.85E-03
103GO:0009826: unidimensional cell growth1.11E-02
104GO:0019760: glucosinolate metabolic process1.13E-02
105GO:0009639: response to red or far red light1.13E-02
106GO:0009828: plant-type cell wall loosening1.13E-02
107GO:0016125: sterol metabolic process1.13E-02
108GO:0006970: response to osmotic stress1.24E-02
109GO:0001666: response to hypoxia1.28E-02
110GO:0048366: leaf development1.36E-02
111GO:0007165: signal transduction1.38E-02
112GO:0016049: cell growth1.49E-02
113GO:0046777: protein autophosphorylation1.53E-02
114GO:0048767: root hair elongation1.60E-02
115GO:0010218: response to far red light1.65E-02
116GO:0048527: lateral root development1.71E-02
117GO:0010119: regulation of stomatal movement1.71E-02
118GO:0045454: cell redox homeostasis1.71E-02
119GO:0045087: innate immune response1.82E-02
120GO:0016051: carbohydrate biosynthetic process1.82E-02
121GO:0042742: defense response to bacterium1.92E-02
122GO:0071555: cell wall organization1.92E-02
123GO:0010114: response to red light2.18E-02
124GO:0006855: drug transmembrane transport2.44E-02
125GO:0006486: protein glycosylation2.70E-02
126GO:0009909: regulation of flower development2.90E-02
127GO:0009734: auxin-activated signaling pathway2.98E-02
128GO:0006351: transcription, DNA-templated3.03E-02
129GO:0046686: response to cadmium ion3.35E-02
130GO:0009553: embryo sac development3.39E-02
131GO:0018105: peptidyl-serine phosphorylation3.54E-02
132GO:0006468: protein phosphorylation3.54E-02
133GO:0009845: seed germination4.30E-02
134GO:0007275: multicellular organism development4.46E-02
135GO:0042744: hydrogen peroxide catabolic process4.46E-02
136GO:0006633: fatty acid biosynthetic process4.78E-02
RankGO TermAdjusted P value
1GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0016762: xyloglucan:xyloglucosyl transferase activity4.20E-05
4GO:0016798: hydrolase activity, acting on glycosyl bonds9.50E-05
5GO:0080132: fatty acid alpha-hydroxylase activity9.88E-05
6GO:0090440: abscisic acid transporter activity9.88E-05
7GO:0043565: sequence-specific DNA binding1.35E-04
8GO:0003712: transcription cofactor activity2.54E-04
9GO:0010295: (+)-abscisic acid 8'-hydroxylase activity3.86E-04
10GO:0052692: raffinose alpha-galactosidase activity3.86E-04
11GO:0003700: transcription factor activity, sequence-specific DNA binding4.64E-04
12GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.80E-04
13GO:0033843: xyloglucan 6-xylosyltransferase activity5.54E-04
14GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding5.66E-04
15GO:0004402: histone acetyltransferase activity5.80E-04
16GO:0050378: UDP-glucuronate 4-epimerase activity7.37E-04
17GO:0004372: glycine hydroxymethyltransferase activity9.32E-04
18GO:0031386: protein tag9.32E-04
19GO:0044212: transcription regulatory region DNA binding1.03E-03
20GO:0035252: UDP-xylosyltransferase activity1.14E-03
21GO:0010427: abscisic acid binding1.14E-03
22GO:0016161: beta-amylase activity1.36E-03
23GO:0004842: ubiquitin-protein transferase activity1.82E-03
24GO:0008271: secondary active sulfate transmembrane transporter activity2.10E-03
25GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.38E-03
26GO:0004864: protein phosphatase inhibitor activity2.95E-03
27GO:0031625: ubiquitin protein ligase binding3.36E-03
28GO:0015116: sulfate transmembrane transporter activity3.57E-03
29GO:0016758: transferase activity, transferring hexosyl groups5.24E-03
30GO:0003714: transcription corepressor activity5.28E-03
31GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity6.42E-03
32GO:0004672: protein kinase activity8.15E-03
33GO:0001085: RNA polymerase II transcription factor binding8.50E-03
34GO:0050662: coenzyme binding8.94E-03
35GO:0004872: receptor activity9.39E-03
36GO:0043531: ADP binding1.26E-02
37GO:0009931: calcium-dependent protein serine/threonine kinase activity1.38E-02
38GO:0015238: drug transmembrane transporter activity1.60E-02
39GO:0004674: protein serine/threonine kinase activity1.66E-02
40GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.71E-02
41GO:0004871: signal transducer activity1.80E-02
42GO:0003677: DNA binding2.04E-02
43GO:0003824: catalytic activity2.16E-02
44GO:0015293: symporter activity2.37E-02
45GO:0016298: lipase activity2.77E-02
46GO:0016757: transferase activity, transferring glycosyl groups2.86E-02
47GO:0045735: nutrient reservoir activity3.04E-02
48GO:0015035: protein disulfide oxidoreductase activity3.54E-02
49GO:0030170: pyridoxal phosphate binding4.38E-02
50GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.46E-02
51GO:0005515: protein binding4.65E-02
52GO:0015297: antiporter activity4.95E-02
RankGO TermAdjusted P value
1GO:0048046: apoplast2.18E-04
2GO:0042406: extrinsic component of endoplasmic reticulum membrane3.86E-04
3GO:0005615: extracellular space1.18E-03
4GO:0019005: SCF ubiquitin ligase complex1.40E-03
5GO:0005794: Golgi apparatus3.93E-03
6GO:0009505: plant-type cell wall6.41E-03
7GO:0015629: actin cytoskeleton6.82E-03
8GO:0005770: late endosome8.50E-03
9GO:0032580: Golgi cisterna membrane1.13E-02
10GO:0005618: cell wall1.14E-02
11GO:0005667: transcription factor complex1.38E-02
12GO:0031902: late endosome membrane2.06E-02
13GO:0005887: integral component of plasma membrane2.87E-02
14GO:0005576: extracellular region2.98E-02
15GO:0009506: plasmodesma3.49E-02
Gene type



Gene DE type