co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48540

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
2	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
3	GO:0006182: cGMP biosynthetic process	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0043269: regulation of ion transport	0.00E+00
6	GO:0015690: aluminum cation transport	0.00E+00
7	GO:0010360: negative regulation of anion channel activity	0.00E+00
8	GO:0009617: response to bacterium	2.19E-11
9	GO:0071456: cellular response to hypoxia	1.03E-08
10	GO:0042742: defense response to bacterium	6.21E-08
11	GO:0010120: camalexin biosynthetic process	3.16E-07
12	GO:0010150: leaf senescence	7.96E-07
13	GO:0009682: induced systemic resistance	1.61E-06
14	GO:0006468: protein phosphorylation	1.74E-06
15	GO:0006979: response to oxidative stress	3.43E-06
16	GO:0055114: oxidation-reduction process	4.01E-06
17	GO:0000162: tryptophan biosynthetic process	6.67E-06
18	GO:0016998: cell wall macromolecule catabolic process	1.29E-05
19	GO:0010112: regulation of systemic acquired resistance	2.81E-05
20	GO:0050832: defense response to fungus	2.84E-05
21	GO:0051707: response to other organism	4.51E-05
22	GO:0006032: chitin catabolic process	4.85E-05
23	GO:0052544: defense response by callose deposition in cell wall	6.14E-05
24	GO:0009697: salicylic acid biosynthetic process	1.37E-04
25	GO:0009759: indole glucosinolate biosynthetic process	1.97E-04
26	GO:0009407: toxin catabolic process	2.10E-04
27	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.66E-04
28	GO:0009625: response to insect	3.05E-04
29	GO:1901183: positive regulation of camalexin biosynthetic process	3.81E-04
30	GO:1902361: mitochondrial pyruvate transmembrane transport	3.81E-04
31	GO:0010230: alternative respiration	3.81E-04
32	GO:0051775: response to redox state	3.81E-04
33	GO:0080120: CAAX-box protein maturation	3.81E-04
34	GO:0071586: CAAX-box protein processing	3.81E-04
35	GO:0015760: glucose-6-phosphate transport	3.81E-04
36	GO:0051245: negative regulation of cellular defense response	3.81E-04
37	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	3.81E-04
38	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.81E-04
39	GO:0009700: indole phytoalexin biosynthetic process	3.81E-04
40	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.31E-04
41	GO:0030091: protein repair	4.31E-04
42	GO:0009636: response to toxic substance	4.82E-04
43	GO:0009851: auxin biosynthetic process	5.60E-04
44	GO:0007166: cell surface receptor signaling pathway	6.60E-04
45	GO:0044419: interspecies interaction between organisms	8.27E-04
46	GO:0006850: mitochondrial pyruvate transport	8.27E-04
47	GO:0015865: purine nucleotide transport	8.27E-04
48	GO:0015712: hexose phosphate transport	8.27E-04
49	GO:0019441: tryptophan catabolic process to kynurenine	8.27E-04
50	GO:0015914: phospholipid transport	8.27E-04
51	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	8.27E-04
52	GO:0009688: abscisic acid biosynthetic process	8.68E-04
53	GO:0043069: negative regulation of programmed cell death	8.68E-04
54	GO:0009737: response to abscisic acid	9.40E-04
55	GO:0000272: polysaccharide catabolic process	9.99E-04
56	GO:0006952: defense response	1.01E-03
57	GO:0009627: systemic acquired resistance	1.11E-03
58	GO:0002213: defense response to insect	1.14E-03
59	GO:0010498: proteasomal protein catabolic process	1.34E-03
60	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	1.34E-03
61	GO:0034051: negative regulation of plant-type hypersensitive response	1.34E-03
62	GO:0010359: regulation of anion channel activity	1.34E-03
63	GO:0035436: triose phosphate transmembrane transport	1.34E-03
64	GO:0051176: positive regulation of sulfur metabolic process	1.34E-03
65	GO:0010272: response to silver ion	1.34E-03
66	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.34E-03
67	GO:0015714: phosphoenolpyruvate transport	1.34E-03
68	GO:0008219: cell death	1.35E-03
69	GO:0009817: defense response to fungus, incompatible interaction	1.35E-03
70	GO:0002237: response to molecule of bacterial origin	1.46E-03
71	GO:0070588: calcium ion transmembrane transport	1.63E-03
72	GO:0010255: glucose mediated signaling pathway	1.93E-03
73	GO:0001676: long-chain fatty acid metabolic process	1.93E-03
74	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.93E-03
75	GO:0019438: aromatic compound biosynthetic process	1.93E-03
76	GO:0046902: regulation of mitochondrial membrane permeability	1.93E-03
77	GO:0006612: protein targeting to membrane	1.93E-03
78	GO:0080147: root hair cell development	2.02E-03
79	GO:0042542: response to hydrogen peroxide	2.40E-03
80	GO:0015713: phosphoglycerate transport	2.60E-03
81	GO:0080142: regulation of salicylic acid biosynthetic process	2.60E-03
82	GO:1901141: regulation of lignin biosynthetic process	2.60E-03
83	GO:0010109: regulation of photosynthesis	2.60E-03
84	GO:0046345: abscisic acid catabolic process	2.60E-03
85	GO:0010363: regulation of plant-type hypersensitive response	2.60E-03
86	GO:0010600: regulation of auxin biosynthetic process	2.60E-03
87	GO:0032259: methylation	3.02E-03
88	GO:0000304: response to singlet oxygen	3.32E-03
89	GO:0034052: positive regulation of plant-type hypersensitive response	3.32E-03
90	GO:0042631: cellular response to water deprivation	3.72E-03
91	GO:0009643: photosynthetic acclimation	4.11E-03
92	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.11E-03
93	GO:0006561: proline biosynthetic process	4.11E-03
94	GO:0010942: positive regulation of cell death	4.11E-03
95	GO:0010256: endomembrane system organization	4.11E-03
96	GO:1902456: regulation of stomatal opening	4.11E-03
97	GO:0048544: recognition of pollen	4.31E-03
98	GO:0009646: response to absence of light	4.31E-03
99	GO:0000302: response to reactive oxygen species	4.95E-03
100	GO:0009626: plant-type hypersensitive response	4.97E-03
101	GO:1902074: response to salt	5.85E-03
102	GO:0043090: amino acid import	5.85E-03
103	GO:1900056: negative regulation of leaf senescence	5.85E-03
104	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	5.85E-03
105	GO:0010252: auxin homeostasis	6.00E-03
106	GO:0080167: response to karrikin	6.76E-03
107	GO:2000070: regulation of response to water deprivation	6.80E-03
108	GO:0009061: anaerobic respiration	6.80E-03
109	GO:0009819: drought recovery	6.80E-03
110	GO:0009816: defense response to bacterium, incompatible interaction	7.58E-03
111	GO:0009607: response to biotic stimulus	7.58E-03
112	GO:0010204: defense response signaling pathway, resistance gene-independent	7.80E-03
113	GO:0043562: cellular response to nitrogen levels	7.80E-03
114	GO:0009808: lignin metabolic process	7.80E-03
115	GO:0009699: phenylpropanoid biosynthetic process	7.80E-03
116	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	7.80E-03
117	GO:0007338: single fertilization	8.86E-03
118	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	9.96E-03
119	GO:0008202: steroid metabolic process	9.96E-03
120	GO:0010119: regulation of stomatal movement	1.08E-02
121	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.11E-02
122	GO:0010162: seed dormancy process	1.11E-02
123	GO:0045087: innate immune response	1.19E-02
124	GO:0009751: response to salicylic acid	1.20E-02
125	GO:0009089: lysine biosynthetic process via diaminopimelate	1.23E-02
126	GO:0030148: sphingolipid biosynthetic process	1.23E-02
127	GO:0006631: fatty acid metabolic process	1.42E-02
128	GO:0055046: microgametogenesis	1.48E-02
129	GO:0009718: anthocyanin-containing compound biosynthetic process	1.48E-02
130	GO:0006094: gluconeogenesis	1.48E-02
131	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.48E-02
132	GO:0009744: response to sucrose	1.54E-02
133	GO:0006541: glutamine metabolic process	1.62E-02
134	GO:0010053: root epidermal cell differentiation	1.75E-02
135	GO:0042343: indole glucosinolate metabolic process	1.75E-02
136	GO:0009846: pollen germination	1.93E-02
137	GO:0009863: salicylic acid mediated signaling pathway	2.04E-02
138	GO:2000377: regulation of reactive oxygen species metabolic process	2.04E-02
139	GO:0005992: trehalose biosynthetic process	2.04E-02
140	GO:0048278: vesicle docking	2.34E-02
141	GO:0031408: oxylipin biosynthetic process	2.34E-02
142	GO:0009723: response to ethylene	2.44E-02
143	GO:0006096: glycolytic process	2.46E-02
144	GO:0030433: ubiquitin-dependent ERAD pathway	2.50E-02
145	GO:0031348: negative regulation of defense response	2.50E-02
146	GO:0009814: defense response, incompatible interaction	2.50E-02
147	GO:0016226: iron-sulfur cluster assembly	2.50E-02
148	GO:0010227: floral organ abscission	2.65E-02
149	GO:0006012: galactose metabolic process	2.65E-02
150	GO:0009620: response to fungus	2.70E-02
151	GO:0009738: abscisic acid-activated signaling pathway	2.74E-02
152	GO:0010200: response to chitin	2.78E-02
153	GO:0009561: megagametogenesis	2.82E-02
154	GO:0010584: pollen exine formation	2.82E-02
155	GO:0009624: response to nematode	2.96E-02
156	GO:0044550: secondary metabolite biosynthetic process	2.96E-02
157	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.98E-02
158	GO:0070417: cellular response to cold	2.98E-02
159	GO:0042391: regulation of membrane potential	3.15E-02
160	GO:0010154: fruit development	3.33E-02
161	GO:0010197: polar nucleus fusion	3.33E-02
162	GO:0008360: regulation of cell shape	3.33E-02
163	GO:0006885: regulation of pH	3.33E-02
164	GO:0061025: membrane fusion	3.50E-02
165	GO:0009749: response to glucose	3.68E-02
166	GO:0002229: defense response to oomycetes	3.86E-02
167	GO:0009630: gravitropism	4.05E-02
168	GO:0009651: response to salt stress	4.43E-02
169	GO:0009567: double fertilization forming a zygote and endosperm	4.43E-02
170	GO:0019760: glucosinolate metabolic process	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	2.93E-07
5	GO:0005516: calmodulin binding	5.22E-06
6	GO:0016301: kinase activity	1.03E-05
7	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.99E-05
8	GO:0004049: anthranilate synthase activity	2.27E-05
9	GO:0004364: glutathione transferase activity	4.11E-05
10	GO:0004568: chitinase activity	4.85E-05
11	GO:0008171: O-methyltransferase activity	4.85E-05
12	GO:0010279: indole-3-acetic acid amido synthetase activity	8.79E-05
13	GO:0009055: electron carrier activity	2.33E-04
14	GO:0004656: procollagen-proline 4-dioxygenase activity	2.66E-04
15	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.66E-04
16	GO:0050660: flavin adenine dinucleotide binding	3.29E-04
17	GO:2001147: camalexin binding	3.81E-04
18	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.81E-04
19	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	3.81E-04
20	GO:2001227: quercitrin binding	3.81E-04
21	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.81E-04
22	GO:0033984: indole-3-glycerol-phosphate lyase activity	3.81E-04
23	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.81E-04
24	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	6.45E-04
25	GO:0045140: inositol phosphoceramide synthase activity	8.27E-04
26	GO:0004061: arylformamidase activity	8.27E-04
27	GO:0015152: glucose-6-phosphate transmembrane transporter activity	8.27E-04
28	GO:0032934: sterol binding	8.27E-04
29	GO:0005524: ATP binding	9.70E-04
30	GO:0004129: cytochrome-c oxidase activity	9.99E-04
31	GO:0005506: iron ion binding	1.10E-03
32	GO:0020037: heme binding	1.18E-03
33	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.27E-03
34	GO:0005388: calcium-transporting ATPase activity	1.29E-03
35	GO:0050833: pyruvate transmembrane transporter activity	1.34E-03
36	GO:0004383: guanylate cyclase activity	1.34E-03
37	GO:0071917: triose-phosphate transmembrane transporter activity	1.34E-03
38	GO:0004324: ferredoxin-NADP+ reductase activity	1.34E-03
39	GO:0030246: carbohydrate binding	1.43E-03
40	GO:0008061: chitin binding	1.63E-03
41	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.93E-03
42	GO:0008276: protein methyltransferase activity	1.93E-03
43	GO:0035529: NADH pyrophosphatase activity	1.93E-03
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.25E-03
45	GO:0004031: aldehyde oxidase activity	2.60E-03
46	GO:0050302: indole-3-acetaldehyde oxidase activity	2.60E-03
47	GO:0015120: phosphoglycerate transmembrane transporter activity	2.60E-03
48	GO:0004834: tryptophan synthase activity	2.60E-03
49	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	3.32E-03
50	GO:0005496: steroid binding	3.32E-03
51	GO:0047631: ADP-ribose diphosphatase activity	3.32E-03
52	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	3.32E-03
53	GO:0005471: ATP:ADP antiporter activity	3.32E-03
54	GO:0045431: flavonol synthase activity	3.32E-03
55	GO:0010294: abscisic acid glucosyltransferase activity	3.32E-03
56	GO:0000210: NAD+ diphosphatase activity	4.11E-03
57	GO:0004029: aldehyde dehydrogenase (NAD) activity	4.11E-03
58	GO:0036402: proteasome-activating ATPase activity	4.11E-03
59	GO:0102391: decanoate--CoA ligase activity	4.95E-03
60	GO:0004602: glutathione peroxidase activity	4.95E-03
61	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.95E-03
62	GO:0051920: peroxiredoxin activity	4.95E-03
63	GO:0005507: copper ion binding	5.25E-03
64	GO:0019825: oxygen binding	5.25E-03
65	GO:0043295: glutathione binding	5.85E-03
66	GO:0004467: long-chain fatty acid-CoA ligase activity	5.85E-03
67	GO:0102425: myricetin 3-O-glucosyltransferase activity	5.85E-03
68	GO:0102360: daphnetin 3-O-glucosyltransferase activity	5.85E-03
69	GO:0008121: ubiquinol-cytochrome-c reductase activity	5.85E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	6.80E-03
71	GO:0016209: antioxidant activity	6.80E-03
72	GO:0004034: aldose 1-epimerase activity	6.80E-03
73	GO:0047893: flavonol 3-O-glucosyltransferase activity	6.80E-03
74	GO:0008142: oxysterol binding	7.80E-03
75	GO:0003843: 1,3-beta-D-glucan synthase activity	7.80E-03
76	GO:0030247: polysaccharide binding	8.44E-03
77	GO:0004683: calmodulin-dependent protein kinase activity	8.44E-03
78	GO:0071949: FAD binding	8.86E-03
79	GO:0005509: calcium ion binding	8.92E-03
80	GO:0030955: potassium ion binding	9.96E-03
81	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	9.96E-03
82	GO:0004743: pyruvate kinase activity	9.96E-03
83	GO:0004713: protein tyrosine kinase activity	1.11E-02
84	GO:0008047: enzyme activator activity	1.11E-02
85	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.19E-02
86	GO:0005543: phospholipid binding	1.23E-02
87	GO:0008559: xenobiotic-transporting ATPase activity	1.23E-02
88	GO:0008194: UDP-glycosyltransferase activity	1.35E-02
89	GO:0050661: NADP binding	1.36E-02
90	GO:0004022: alcohol dehydrogenase (NAD) activity	1.48E-02
91	GO:0005315: inorganic phosphate transmembrane transporter activity	1.48E-02
92	GO:0005262: calcium channel activity	1.48E-02
93	GO:0000175: 3'-5'-exoribonuclease activity	1.48E-02
94	GO:0004535: poly(A)-specific ribonuclease activity	1.62E-02
95	GO:0031624: ubiquitin conjugating enzyme binding	1.62E-02
96	GO:0004175: endopeptidase activity	1.62E-02
97	GO:0004190: aspartic-type endopeptidase activity	1.75E-02
98	GO:0030552: cAMP binding	1.75E-02
99	GO:0004867: serine-type endopeptidase inhibitor activity	1.75E-02
100	GO:0030553: cGMP binding	1.75E-02
101	GO:0017025: TBP-class protein binding	1.75E-02
102	GO:0051287: NAD binding	1.86E-02
103	GO:0008168: methyltransferase activity	1.94E-02
104	GO:0031418: L-ascorbic acid binding	2.04E-02
105	GO:0003954: NADH dehydrogenase activity	2.04E-02
106	GO:0005216: ion channel activity	2.19E-02
107	GO:0008408: 3'-5' exonuclease activity	2.34E-02
108	GO:0035251: UDP-glucosyltransferase activity	2.34E-02
109	GO:0004540: ribonuclease activity	2.34E-02
110	GO:0004497: monooxygenase activity	2.66E-02
111	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.70E-02
112	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.70E-02
113	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.82E-02
114	GO:0016746: transferase activity, transferring acyl groups	3.05E-02
115	GO:0005451: monovalent cation:proton antiporter activity	3.15E-02
116	GO:0005249: voltage-gated potassium channel activity	3.15E-02
117	GO:0030551: cyclic nucleotide binding	3.15E-02
118	GO:0016853: isomerase activity	3.50E-02
119	GO:0015299: solute:proton antiporter activity	3.50E-02
120	GO:0015385: sodium:proton antiporter activity	4.24E-02
121	GO:0008483: transaminase activity	4.62E-02
122	GO:0016491: oxidoreductase activity	4.66E-02
123	GO:0015297: antiporter activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.86E-09
2	GO:0016021: integral component of membrane	4.08E-06
3	GO:0005783: endoplasmic reticulum	1.39E-05
4	GO:0030014: CCR4-NOT complex	3.81E-04
5	GO:0005901: caveola	8.27E-04
6	GO:0005950: anthranilate synthase complex	8.27E-04
7	GO:0031304: intrinsic component of mitochondrial inner membrane	8.27E-04
8	GO:0005751: mitochondrial respiratory chain complex IV	1.34E-03
9	GO:0000325: plant-type vacuole	1.63E-03
10	GO:0016020: membrane	1.74E-03
11	GO:0030660: Golgi-associated vesicle membrane	2.60E-03
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.60E-03
13	GO:0005829: cytosol	2.82E-03
14	GO:0005746: mitochondrial respiratory chain	3.32E-03
15	GO:0031597: cytosolic proteasome complex	4.95E-03
16	GO:0031595: nuclear proteasome complex	5.85E-03
17	GO:0031305: integral component of mitochondrial inner membrane	6.80E-03
18	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	6.80E-03
19	GO:0000148: 1,3-beta-D-glucan synthase complex	7.80E-03
20	GO:0008540: proteasome regulatory particle, base subcomplex	9.96E-03
21	GO:0005740: mitochondrial envelope	1.11E-02
22	GO:0005765: lysosomal membrane	1.23E-02
23	GO:0043231: intracellular membrane-bounded organelle	1.42E-02
24	GO:0005750: mitochondrial respiratory chain complex III	1.62E-02
25	GO:0030176: integral component of endoplasmic reticulum membrane	1.75E-02
26	GO:0005770: late endosome	3.33E-02
27	GO:0009504: cell plate	3.68E-02
28	GO:0005774: vacuolar membrane	4.72E-02