co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G48500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
2	GO:2001294: malonyl-CoA catabolic process	0.00E+00
3	GO:0090506: axillary shoot meristem initiation	1.32E-04
4	GO:0006753: nucleoside phosphate metabolic process	1.32E-04
5	GO:0048544: recognition of pollen	1.41E-04
6	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.97E-04
7	GO:0080110: sporopollenin biosynthetic process	3.42E-04
8	GO:0009635: response to herbicide	4.20E-04
9	GO:0016554: cytidine to uridine editing	4.20E-04
10	GO:0010067: procambium histogenesis	5.02E-04
11	GO:0015937: coenzyme A biosynthetic process	5.88E-04
12	GO:0008152: metabolic process	6.12E-04
13	GO:0009819: drought recovery	6.76E-04
14	GO:1900865: chloroplast RNA modification	9.61E-04
15	GO:0000272: polysaccharide catabolic process	1.16E-03
16	GO:0005983: starch catabolic process	1.27E-03
17	GO:0010223: secondary shoot formation	1.50E-03
18	GO:0010020: chloroplast fission	1.50E-03
19	GO:0019762: glucosinolate catabolic process	1.73E-03
20	GO:0080092: regulation of pollen tube growth	2.25E-03
21	GO:0001944: vasculature development	2.38E-03
22	GO:0009658: chloroplast organization	2.46E-03
23	GO:0010089: xylem development	2.52E-03
24	GO:0010584: pollen exine formation	2.52E-03
25	GO:0010087: phloem or xylem histogenesis	2.80E-03
26	GO:0009817: defense response to fungus, incompatible interaction	5.23E-03
27	GO:0000160: phosphorelay signal transduction system	5.41E-03
28	GO:0009407: toxin catabolic process	5.60E-03
29	GO:0007165: signal transduction	6.73E-03
30	GO:0008283: cell proliferation	7.34E-03
31	GO:0009736: cytokinin-activated signaling pathway	9.03E-03
32	GO:0042742: defense response to bacterium	1.61E-02
33	GO:0010150: leaf senescence	1.70E-02
34	GO:0007623: circadian rhythm	1.70E-02
35	GO:0006470: protein dephosphorylation	1.87E-02
36	GO:0006810: transport	2.36E-02
37	GO:0009860: pollen tube growth	2.45E-02
38	GO:0055114: oxidation-reduction process	2.50E-02
39	GO:0046777: protein autophosphorylation	2.84E-02
40	GO:0015979: photosynthesis	2.98E-02
41	GO:0045454: cell redox homeostasis	3.08E-02
42	GO:0007275: multicellular organism development	3.17E-02
43	GO:0032259: methylation	3.47E-02
44	GO:0009753: response to jasmonic acid	3.76E-02
45	GO:0009873: ethylene-activated signaling pathway	4.29E-02

Rank	GO Term	Adjusted P value
1	GO:0019203: carbohydrate phosphatase activity	3.00E-05
2	GO:0004560: alpha-L-fucosidase activity	3.00E-05
3	GO:0050308: sugar-phosphatase activity	3.00E-05
4	GO:0010945: CoA pyrophosphatase activity	3.00E-05
5	GO:0008967: phosphoglycolate phosphatase activity	7.58E-05
6	GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity	1.97E-04
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.67E-04
8	GO:1990137: plant seed peroxidase activity	2.67E-04
9	GO:2001070: starch binding	4.20E-04
10	GO:0102229: amylopectin maltohydrolase activity	4.20E-04
11	GO:0000210: NAD+ diphosphatase activity	4.20E-04
12	GO:0051920: peroxiredoxin activity	5.02E-04
13	GO:0016161: beta-amylase activity	5.02E-04
14	GO:0016209: antioxidant activity	6.76E-04
15	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	8.63E-04
16	GO:0030234: enzyme regulator activity	1.06E-03
17	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.16E-03
18	GO:0031072: heat shock protein binding	1.38E-03
19	GO:0008083: growth factor activity	1.50E-03
20	GO:0033612: receptor serine/threonine kinase binding	2.11E-03
21	GO:0003756: protein disulfide isomerase activity	2.52E-03
22	GO:0005102: receptor binding	2.66E-03
23	GO:0050662: coenzyme binding	3.09E-03
24	GO:0048038: quinone binding	3.40E-03
25	GO:0000156: phosphorelay response regulator activity	3.71E-03
26	GO:0009055: electron carrier activity	4.79E-03
27	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	5.78E-03
28	GO:0004364: glutathione transferase activity	7.14E-03
29	GO:0005198: structural molecule activity	7.96E-03
30	GO:0030246: carbohydrate binding	1.07E-02
31	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.09E-02
32	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.09E-02
33	GO:0051082: unfolded protein binding	1.16E-02
34	GO:0008194: UDP-glycosyltransferase activity	1.85E-02
35	GO:0042802: identical protein binding	2.02E-02
36	GO:0016491: oxidoreductase activity	2.12E-02
37	GO:0008168: methyltransferase activity	2.26E-02
38	GO:0004601: peroxidase activity	2.32E-02
39	GO:0016788: hydrolase activity, acting on ester bonds	2.36E-02
40	GO:0043531: ADP binding	2.48E-02
41	GO:0050660: flavin adenine dinucleotide binding	2.58E-02
42	GO:0052689: carboxylic ester hydrolase activity	2.91E-02
43	GO:0016301: kinase activity	2.96E-02
44	GO:0016787: hydrolase activity	3.45E-02
45	GO:0003924: GTPase activity	3.58E-02
46	GO:0004519: endonuclease activity	3.80E-02
47	GO:0008289: lipid binding	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0009575: chromoplast stroma	0.00E+00
2	GO:0009507: chloroplast	4.69E-06
3	GO:0009534: chloroplast thylakoid	1.83E-04
4	GO:0009941: chloroplast envelope	1.92E-04
5	GO:0009535: chloroplast thylakoid membrane	2.55E-04
6	GO:0009533: chloroplast stromal thylakoid	5.88E-04
7	GO:0005811: lipid particle	7.68E-04
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.63E-04
9	GO:0016324: apical plasma membrane	1.06E-03
10	GO:0009508: plastid chromosome	1.38E-03
11	GO:0009570: chloroplast stroma	1.72E-03
12	GO:0042651: thylakoid membrane	1.98E-03
13	GO:0009532: plastid stroma	2.11E-03
14	GO:0031969: chloroplast membrane	3.04E-03
15	GO:0005778: peroxisomal membrane	4.03E-03
16	GO:0009295: nucleoid	4.03E-03
17	GO:0009706: chloroplast inner membrane	1.16E-02
18	GO:0010287: plastoglobule	1.31E-02
19	GO:0009543: chloroplast thylakoid lumen	1.36E-02
20	GO:0005615: extracellular space	1.85E-02
21	GO:0005874: microtubule	2.64E-02
22	GO:0043231: intracellular membrane-bounded organelle	3.83E-02