Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G47640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009264: deoxyribonucleotide catabolic process0.00E+00
2GO:1901038: cyanidin 3-O-glucoside metabolic process0.00E+00
3GO:0000024: maltose biosynthetic process0.00E+00
4GO:0006559: L-phenylalanine catabolic process3.09E-06
5GO:0006796: phosphate-containing compound metabolic process3.09E-06
6GO:0051555: flavonol biosynthetic process2.10E-05
7GO:0043903: regulation of symbiosis, encompassing mutualism through parasitism3.00E-05
8GO:0019605: butyrate metabolic process3.00E-05
9GO:0006083: acetate metabolic process3.00E-05
10GO:0019388: galactose catabolic process7.58E-05
11GO:0080183: response to photooxidative stress7.58E-05
12GO:0071395: cellular response to jasmonic acid stimulus7.58E-05
13GO:0009411: response to UV9.13E-05
14GO:0006520: cellular amino acid metabolic process1.30E-04
15GO:1901562: response to paraquat1.32E-04
16GO:0010253: UDP-rhamnose biosynthetic process1.32E-04
17GO:0046417: chorismate metabolic process1.32E-04
18GO:0009963: positive regulation of flavonoid biosynthetic process1.97E-04
19GO:0009650: UV protection1.97E-04
20GO:0010731: protein glutathionylation1.97E-04
21GO:0009590: detection of gravity1.97E-04
22GO:0006572: tyrosine catabolic process1.97E-04
23GO:0034613: cellular protein localization2.67E-04
24GO:0080167: response to karrikin3.29E-04
25GO:0009813: flavonoid biosynthetic process3.32E-04
26GO:0071493: cellular response to UV-B3.42E-04
27GO:0071368: cellular response to cytokinin stimulus3.42E-04
28GO:0006097: glyoxylate cycle3.42E-04
29GO:0042732: D-xylose metabolic process4.20E-04
30GO:0010315: auxin efflux4.20E-04
31GO:0010304: PSII associated light-harvesting complex II catabolic process4.20E-04
32GO:0009610: response to symbiotic fungus5.88E-04
33GO:0098869: cellular oxidant detoxification5.88E-04
34GO:0005978: glycogen biosynthetic process6.76E-04
35GO:0009909: regulation of flower development7.52E-04
36GO:0015996: chlorophyll catabolic process7.68E-04
37GO:0034765: regulation of ion transmembrane transport8.63E-04
38GO:0010018: far-red light signaling pathway9.61E-04
39GO:0009698: phenylpropanoid metabolic process1.16E-03
40GO:0009073: aromatic amino acid family biosynthetic process1.16E-03
41GO:0000272: polysaccharide catabolic process1.16E-03
42GO:0048229: gametophyte development1.16E-03
43GO:0005983: starch catabolic process1.27E-03
44GO:0006006: glucose metabolic process1.38E-03
45GO:0009718: anthocyanin-containing compound biosynthetic process1.38E-03
46GO:0010223: secondary shoot formation1.50E-03
47GO:0009934: regulation of meristem structural organization1.50E-03
48GO:0009225: nucleotide-sugar metabolic process1.61E-03
49GO:0007623: circadian rhythm1.61E-03
50GO:0006487: protein N-linked glycosylation1.86E-03
51GO:0019953: sexual reproduction1.98E-03
52GO:0019915: lipid storage2.11E-03
53GO:0006366: transcription from RNA polymerase II promoter2.11E-03
54GO:0010584: pollen exine formation2.52E-03
55GO:0042127: regulation of cell proliferation2.52E-03
56GO:0016117: carotenoid biosynthetic process2.66E-03
57GO:0042335: cuticle development2.80E-03
58GO:0019252: starch biosynthetic process3.24E-03
59GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.40E-03
60GO:0010193: response to ozone3.40E-03
61GO:0016125: sterol metabolic process3.87E-03
62GO:0009828: plant-type cell wall loosening3.87E-03
63GO:0009753: response to jasmonic acid4.79E-03
64GO:0048573: photoperiodism, flowering4.88E-03
65GO:0008152: metabolic process4.92E-03
66GO:0006811: ion transport5.60E-03
67GO:0010218: response to far red light5.60E-03
68GO:0010119: regulation of stomatal movement5.78E-03
69GO:0010043: response to zinc ion5.78E-03
70GO:0006631: fatty acid metabolic process6.94E-03
71GO:0009926: auxin polar transport7.34E-03
72GO:0009611: response to wounding8.09E-03
73GO:0009809: lignin biosynthetic process9.03E-03
74GO:0051603: proteolysis involved in cellular protein catabolic process9.25E-03
75GO:0010224: response to UV-B9.25E-03
76GO:0009058: biosynthetic process1.41E-02
77GO:0009845: seed germination1.43E-02
78GO:0030154: cell differentiation1.75E-02
79GO:0009733: response to auxin1.81E-02
80GO:0009739: response to gibberellin1.85E-02
81GO:0009409: response to cold2.18E-02
82GO:0009826: unidimensional cell growth2.26E-02
83GO:0009723: response to ethylene2.58E-02
84GO:0016042: lipid catabolic process3.50E-02
85GO:0009751: response to salicylic acid3.54E-02
86GO:0006629: lipid metabolic process3.58E-02
87GO:0009408: response to heat3.58E-02
88GO:0006508: proteolysis4.92E-02
RankGO TermAdjusted P value
1GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity0.00E+00
2GO:1990055: phenylacetaldehyde synthase activity0.00E+00
3GO:0045430: chalcone isomerase activity1.16E-06
4GO:0102229: amylopectin maltohydrolase activity3.09E-06
5GO:0016161: beta-amylase activity4.52E-06
6GO:0004427: inorganic diphosphatase activity6.30E-06
7GO:0047760: butyrate-CoA ligase activity3.00E-05
8GO:0005244: voltage-gated ion channel activity3.00E-05
9GO:0004837: tyrosine decarboxylase activity3.00E-05
10GO:0003987: acetate-CoA ligase activity3.00E-05
11GO:0050377: UDP-glucose 4,6-dehydratase activity7.58E-05
12GO:0004106: chorismate mutase activity7.58E-05
13GO:0004614: phosphoglucomutase activity7.58E-05
14GO:0016868: intramolecular transferase activity, phosphotransferases7.58E-05
15GO:0008460: dTDP-glucose 4,6-dehydratase activity7.58E-05
16GO:0051879: Hsp90 protein binding7.58E-05
17GO:0010280: UDP-L-rhamnose synthase activity7.58E-05
18GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.32E-04
19GO:0008253: 5'-nucleotidase activity1.32E-04
20GO:0045174: glutathione dehydrogenase (ascorbate) activity1.32E-04
21GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity1.97E-04
22GO:0000287: magnesium ion binding2.41E-04
23GO:0016208: AMP binding4.20E-04
24GO:0016462: pyrophosphatase activity4.20E-04
25GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity4.20E-04
26GO:0035252: UDP-xylosyltransferase activity4.20E-04
27GO:0016688: L-ascorbate peroxidase activity4.20E-04
28GO:0016757: transferase activity, transferring glycosyl groups5.49E-04
29GO:0016621: cinnamoyl-CoA reductase activity5.88E-04
30GO:0008970: phosphatidylcholine 1-acylhydrolase activity7.68E-04
31GO:0016207: 4-coumarate-CoA ligase activity8.63E-04
32GO:0080044: quercetin 7-O-glucosyltransferase activity8.75E-04
33GO:0080043: quercetin 3-O-glucosyltransferase activity8.75E-04
34GO:0030170: pyridoxal phosphate binding1.30E-03
35GO:0008194: UDP-glycosyltransferase activity1.79E-03
36GO:0001046: core promoter sequence-specific DNA binding1.86E-03
37GO:0004176: ATP-dependent peptidase activity2.11E-03
38GO:0016853: isomerase activity3.09E-03
39GO:0004197: cysteine-type endopeptidase activity3.55E-03
40GO:0008237: metallopeptidase activity4.03E-03
41GO:0008375: acetylglucosaminyltransferase activity4.70E-03
42GO:0004806: triglyceride lipase activity4.88E-03
43GO:0008236: serine-type peptidase activity5.05E-03
44GO:0004222: metalloendopeptidase activity5.60E-03
45GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding5.78E-03
46GO:0004364: glutathione transferase activity7.14E-03
47GO:0004185: serine-type carboxypeptidase activity7.34E-03
48GO:0035091: phosphatidylinositol binding7.75E-03
49GO:0008234: cysteine-type peptidase activity9.70E-03
50GO:0016874: ligase activity1.11E-02
51GO:0016758: transferase activity, transferring hexosyl groups1.33E-02
52GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.38E-02
53GO:0016491: oxidoreductase activity2.12E-02
54GO:0003700: transcription factor activity, sequence-specific DNA binding2.50E-02
55GO:0020037: heme binding2.54E-02
56GO:0004497: monooxygenase activity2.71E-02
57GO:0016887: ATPase activity4.88E-02
RankGO TermAdjusted P value
1GO:0005764: lysosome4.04E-05
2GO:0042406: extrinsic component of endoplasmic reticulum membrane1.32E-04
3GO:0009507: chloroplast6.90E-04
4GO:0010319: stromule4.03E-03
5GO:0043231: intracellular membrane-bounded organelle4.92E-03
6GO:0009570: chloroplast stroma7.24E-03
7GO:0005777: peroxisome9.08E-03
8GO:0010287: plastoglobule1.31E-02
9GO:0009705: plant-type vacuole membrane1.70E-02
10GO:0005615: extracellular space1.85E-02
11GO:0009536: plastid1.97E-02
12GO:0005773: vacuole2.20E-02
13GO:0005829: cytosol2.88E-02
14GO:0005783: endoplasmic reticulum3.10E-02
15GO:0005743: mitochondrial inner membrane3.40E-02
Gene type



Gene DE type