co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0042254: ribosome biogenesis	4.18E-06
4	GO:0032544: plastid translation	1.04E-04
5	GO:0006412: translation	1.09E-04
6	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.27E-04
7	GO:0060627: regulation of vesicle-mediated transport	1.27E-04
8	GO:0071277: cellular response to calcium ion	1.27E-04
9	GO:0006869: lipid transport	1.51E-04
10	GO:0010143: cutin biosynthetic process	3.20E-04
11	GO:0042546: cell wall biogenesis	3.71E-04
12	GO:0015714: phosphoenolpyruvate transport	4.86E-04
13	GO:0006065: UDP-glucuronate biosynthetic process	4.86E-04
14	GO:0090506: axillary shoot meristem initiation	4.86E-04
15	GO:0007231: osmosensory signaling pathway	6.95E-04
16	GO:0045454: cell redox homeostasis	8.16E-04
17	GO:2000122: negative regulation of stomatal complex development	9.21E-04
18	GO:0033500: carbohydrate homeostasis	9.21E-04
19	GO:0010037: response to carbon dioxide	9.21E-04
20	GO:0015976: carbon utilization	9.21E-04
21	GO:0000919: cell plate assembly	9.21E-04
22	GO:0015713: phosphoglycerate transport	9.21E-04
23	GO:0010583: response to cyclopentenone	1.13E-03
24	GO:0007094: mitotic spindle assembly checkpoint	1.16E-03
25	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.43E-03
26	GO:0045490: pectin catabolic process	1.58E-03
27	GO:0006694: steroid biosynthetic process	1.71E-03
28	GO:0048444: floral organ morphogenesis	1.71E-03
29	GO:0009955: adaxial/abaxial pattern specification	1.71E-03
30	GO:0010067: procambium histogenesis	1.71E-03
31	GO:1901259: chloroplast rRNA processing	1.71E-03
32	GO:0010411: xyloglucan metabolic process	1.78E-03
33	GO:0071555: cell wall organization	1.91E-03
34	GO:0042742: defense response to bacterium	1.91E-03
35	GO:0009395: phospholipid catabolic process	2.01E-03
36	GO:0071669: plant-type cell wall organization or biogenesis	2.01E-03
37	GO:0009834: plant-type secondary cell wall biogenesis	2.17E-03
38	GO:0030091: protein repair	2.32E-03
39	GO:0009704: de-etiolation	2.32E-03
40	GO:0031540: regulation of anthocyanin biosynthetic process	2.32E-03
41	GO:0006526: arginine biosynthetic process	2.65E-03
42	GO:0009808: lignin metabolic process	2.65E-03
43	GO:0006631: fatty acid metabolic process	2.94E-03
44	GO:0090333: regulation of stomatal closure	3.00E-03
45	GO:0055114: oxidation-reduction process	3.14E-03
46	GO:0007346: regulation of mitotic cell cycle	3.36E-03
47	GO:0006949: syncytium formation	3.73E-03
48	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.77E-03
49	GO:0018119: peptidyl-cysteine S-nitrosylation	4.12E-03
50	GO:0006816: calcium ion transport	4.12E-03
51	GO:0006820: anion transport	4.52E-03
52	GO:0006006: glucose metabolic process	4.93E-03
53	GO:0010229: inflorescence development	4.93E-03
54	GO:0010223: secondary shoot formation	5.36E-03
55	GO:0009934: regulation of meristem structural organization	5.36E-03
56	GO:0048467: gynoecium development	5.36E-03
57	GO:0019253: reductive pentose-phosphate cycle	5.36E-03
58	GO:0016042: lipid catabolic process	5.70E-03
59	GO:0070588: calcium ion transmembrane transport	5.80E-03
60	GO:0010025: wax biosynthetic process	6.25E-03
61	GO:0042023: DNA endoreduplication	6.25E-03
62	GO:0019762: glucosinolate catabolic process	6.25E-03
63	GO:0000027: ribosomal large subunit assembly	6.71E-03
64	GO:0051302: regulation of cell division	7.19E-03
65	GO:0016998: cell wall macromolecule catabolic process	7.68E-03
66	GO:0061077: chaperone-mediated protein folding	7.68E-03
67	GO:0048278: vesicle docking	7.68E-03
68	GO:0030245: cellulose catabolic process	8.18E-03
69	GO:0001944: vasculature development	8.69E-03
70	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.69E-03
71	GO:0010089: xylem development	9.21E-03
72	GO:0019722: calcium-mediated signaling	9.21E-03
73	GO:0000271: polysaccharide biosynthetic process	1.03E-02
74	GO:0000413: protein peptidyl-prolyl isomerization	1.03E-02
75	GO:0010087: phloem or xylem histogenesis	1.03E-02
76	GO:0042335: cuticle development	1.03E-02
77	GO:0006520: cellular amino acid metabolic process	1.09E-02
78	GO:0009735: response to cytokinin	1.09E-02
79	GO:0061025: membrane fusion	1.14E-02
80	GO:0009409: response to cold	1.22E-02
81	GO:0016132: brassinosteroid biosynthetic process	1.26E-02
82	GO:0002229: defense response to oomycetes	1.26E-02
83	GO:0007264: small GTPase mediated signal transduction	1.32E-02
84	GO:0051301: cell division	1.37E-02
85	GO:0009828: plant-type cell wall loosening	1.44E-02
86	GO:0010252: auxin homeostasis	1.44E-02
87	GO:0007267: cell-cell signaling	1.50E-02
88	GO:0009826: unidimensional cell growth	1.57E-02
89	GO:0009627: systemic acquired resistance	1.77E-02
90	GO:0006906: vesicle fusion	1.77E-02
91	GO:0015995: chlorophyll biosynthetic process	1.83E-02
92	GO:0030244: cellulose biosynthetic process	1.97E-02
93	GO:0009817: defense response to fungus, incompatible interaction	1.97E-02
94	GO:0009832: plant-type cell wall biogenesis	2.04E-02
95	GO:0009813: flavonoid biosynthetic process	2.04E-02
96	GO:0010311: lateral root formation	2.04E-02
97	GO:0010119: regulation of stomatal movement	2.19E-02
98	GO:0006886: intracellular protein transport	2.51E-02
99	GO:0006887: exocytosis	2.64E-02
100	GO:0008283: cell proliferation	2.80E-02
101	GO:0051707: response to other organism	2.80E-02
102	GO:0009664: plant-type cell wall organization	3.29E-02
103	GO:0042538: hyperosmotic salinity response	3.29E-02
104	GO:0009809: lignin biosynthetic process	3.46E-02
105	GO:0006813: potassium ion transport	3.46E-02
106	GO:0051603: proteolysis involved in cellular protein catabolic process	3.54E-02
107	GO:0006096: glycolytic process	3.89E-02
108	GO:0048367: shoot system development	3.98E-02
109	GO:0005975: carbohydrate metabolic process	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0050614: delta24-sterol reductase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0051920: peroxiredoxin activity	1.44E-09
6	GO:0016209: antioxidant activity	5.19E-09
7	GO:0019843: rRNA binding	1.35E-08
8	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	3.08E-06
9	GO:0003735: structural constituent of ribosome	1.87E-05
10	GO:0030570: pectate lyase activity	3.10E-05
11	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.27E-04
12	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.27E-04
13	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	1.27E-04
14	GO:0031957: very long-chain fatty acid-CoA ligase activity	1.27E-04
15	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	2.94E-04
16	GO:0008289: lipid binding	3.59E-04
17	GO:0004601: peroxidase activity	4.47E-04
18	GO:0051287: NAD binding	4.51E-04
19	GO:0016788: hydrolase activity, acting on ester bonds	4.61E-04
20	GO:0005504: fatty acid binding	4.86E-04
21	GO:0030267: glyoxylate reductase (NADP) activity	4.86E-04
22	GO:0003979: UDP-glucose 6-dehydrogenase activity	4.86E-04
23	GO:0050734: hydroxycinnamoyltransferase activity	4.86E-04
24	GO:0001872: (1->3)-beta-D-glucan binding	6.95E-04
25	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	9.06E-04
26	GO:0045430: chalcone isomerase activity	9.21E-04
27	GO:0046527: glucosyltransferase activity	9.21E-04
28	GO:0015120: phosphoglycerate transmembrane transporter activity	9.21E-04
29	GO:0005507: copper ion binding	1.03E-03
30	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.06E-03
31	GO:0008381: mechanically-gated ion channel activity	1.16E-03
32	GO:0004040: amidase activity	1.16E-03
33	GO:0009055: electron carrier activity	1.24E-03
34	GO:0051753: mannan synthase activity	1.71E-03
35	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.71E-03
36	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.71E-03
37	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.71E-03
38	GO:0102391: decanoate--CoA ligase activity	1.71E-03
39	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.78E-03
40	GO:0004467: long-chain fatty acid-CoA ligase activity	2.01E-03
41	GO:0052747: sinapyl alcohol dehydrogenase activity	2.32E-03
42	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.71E-03
43	GO:0030234: enzyme regulator activity	3.73E-03
44	GO:0052689: carboxylic ester hydrolase activity	4.10E-03
45	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.52E-03
46	GO:0004089: carbonate dehydratase activity	4.93E-03
47	GO:0005262: calcium channel activity	4.93E-03
48	GO:0004565: beta-galactosidase activity	4.93E-03
49	GO:0005528: FK506 binding	6.71E-03
50	GO:0008324: cation transmembrane transporter activity	7.19E-03
51	GO:0033612: receptor serine/threonine kinase binding	7.68E-03
52	GO:0016829: lyase activity	8.25E-03
53	GO:0008810: cellulase activity	8.69E-03
54	GO:0016760: cellulose synthase (UDP-forming) activity	8.69E-03
55	GO:0005102: receptor binding	9.75E-03
56	GO:0008080: N-acetyltransferase activity	1.09E-02
57	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.50E-02
58	GO:0030247: polysaccharide binding	1.83E-02
59	GO:0030145: manganese ion binding	2.19E-02
60	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.19E-02
61	GO:0003746: translation elongation factor activity	2.33E-02
62	GO:0003993: acid phosphatase activity	2.41E-02
63	GO:0000149: SNARE binding	2.48E-02
64	GO:0050661: NADP binding	2.56E-02
65	GO:0004185: serine-type carboxypeptidase activity	2.80E-02
66	GO:0005484: SNAP receptor activity	2.80E-02
67	GO:0003924: GTPase activity	2.99E-02
68	GO:0003690: double-stranded DNA binding	3.54E-02
69	GO:0045735: nutrient reservoir activity	3.89E-02
70	GO:0004650: polygalacturonase activity	4.16E-02
71	GO:0030599: pectinesterase activity	4.26E-02

Rank	GO Term	Adjusted P value
1	GO:0048046: apoplast	1.62E-16
2	GO:0046658: anchored component of plasma membrane	4.95E-12
3	GO:0009570: chloroplast stroma	5.59E-11
4	GO:0031225: anchored component of membrane	2.13E-09
5	GO:0009941: chloroplast envelope	3.98E-08
6	GO:0009507: chloroplast	3.00E-06
7	GO:0009505: plant-type cell wall	3.17E-06
8	GO:0005886: plasma membrane	1.17E-05
9	GO:0005576: extracellular region	1.28E-05
10	GO:0005840: ribosome	1.43E-05
11	GO:0009534: chloroplast thylakoid	1.98E-05
12	GO:0010319: stromule	1.04E-04
13	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.27E-04
14	GO:0009579: thylakoid	1.45E-04
15	GO:0005618: cell wall	1.86E-04
16	GO:0000311: plastid large ribosomal subunit	2.48E-04
17	GO:0016020: membrane	3.06E-04
18	GO:0005853: eukaryotic translation elongation factor 1 complex	4.86E-04
19	GO:0005828: kinetochore microtubule	9.21E-04
20	GO:0009543: chloroplast thylakoid lumen	1.06E-03
21	GO:0000776: kinetochore	1.16E-03
22	GO:0000793: condensed chromosome	1.43E-03
23	GO:0000777: condensed chromosome kinetochore	1.71E-03
24	GO:0009506: plasmodesma	1.71E-03
25	GO:0010369: chromocenter	1.71E-03
26	GO:0000794: condensed nuclear chromosome	2.01E-03
27	GO:0009533: chloroplast stromal thylakoid	2.01E-03
28	GO:0009535: chloroplast thylakoid membrane	2.25E-03
29	GO:0031977: thylakoid lumen	2.94E-03
30	GO:0005763: mitochondrial small ribosomal subunit	3.00E-03
31	GO:0005876: spindle microtubule	3.36E-03
32	GO:0009536: plastid	1.05E-02
33	GO:0009504: cell plate	1.20E-02
34	GO:0015934: large ribosomal subunit	2.19E-02
35	GO:0031201: SNARE complex	2.64E-02
36	GO:0005635: nuclear envelope	3.63E-02
37	GO:0012505: endomembrane system	4.35E-02