co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070291: N-acylethanolamine metabolic process	0.00E+00
2	GO:0016236: macroautophagy	0.00E+00
3	GO:0009594: detection of nutrient	0.00E+00
4	GO:0010111: glyoxysome organization	0.00E+00
5	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
6	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
7	GO:0019450: L-cysteine catabolic process to pyruvate	0.00E+00
8	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
9	GO:0060560: developmental growth involved in morphogenesis	0.00E+00
10	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
11	GO:0046167: glycerol-3-phosphate biosynthetic process	2.27E-04
12	GO:0015760: glucose-6-phosphate transport	2.27E-04
13	GO:0030242: pexophagy	2.27E-04
14	GO:1990641: response to iron ion starvation	2.27E-04
15	GO:0000303: response to superoxide	2.27E-04
16	GO:1902265: abscisic acid homeostasis	2.27E-04
17	GO:0006635: fatty acid beta-oxidation	2.28E-04
18	GO:0008202: steroid metabolic process	3.56E-04
19	GO:0019395: fatty acid oxidation	5.05E-04
20	GO:0050684: regulation of mRNA processing	5.05E-04
21	GO:0006641: triglyceride metabolic process	5.05E-04
22	GO:0007584: response to nutrient	5.05E-04
23	GO:0006101: citrate metabolic process	5.05E-04
24	GO:0035542: regulation of SNARE complex assembly	5.05E-04
25	GO:0051258: protein polymerization	5.05E-04
26	GO:0016197: endosomal transport	5.05E-04
27	GO:0010102: lateral root morphogenesis	6.27E-04
28	GO:0007033: vacuole organization	7.89E-04
29	GO:0035436: triose phosphate transmembrane transport	8.21E-04
30	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	8.21E-04
31	GO:0009663: plasmodesma organization	8.21E-04
32	GO:0015714: phosphoenolpyruvate transport	8.21E-04
33	GO:0019563: glycerol catabolic process	8.21E-04
34	GO:0032784: regulation of DNA-templated transcription, elongation	8.21E-04
35	GO:2000377: regulation of reactive oxygen species metabolic process	9.67E-04
36	GO:0009695: jasmonic acid biosynthetic process	1.06E-03
37	GO:0006882: cellular zinc ion homeostasis	1.17E-03
38	GO:0051259: protein oligomerization	1.17E-03
39	GO:0019048: modulation by virus of host morphology or physiology	1.17E-03
40	GO:0006072: glycerol-3-phosphate metabolic process	1.17E-03
41	GO:0006809: nitric oxide biosynthetic process	1.17E-03
42	GO:0051601: exocyst localization	1.17E-03
43	GO:0030433: ubiquitin-dependent ERAD pathway	1.27E-03
44	GO:0009306: protein secretion	1.50E-03
45	GO:0010188: response to microbial phytotoxin	1.56E-03
46	GO:0006878: cellular copper ion homeostasis	1.56E-03
47	GO:0006646: phosphatidylethanolamine biosynthetic process	1.56E-03
48	GO:0010222: stem vascular tissue pattern formation	1.56E-03
49	GO:0009687: abscisic acid metabolic process	1.56E-03
50	GO:0015743: malate transport	1.56E-03
51	GO:0006370: 7-methylguanosine mRNA capping	1.56E-03
52	GO:0010107: potassium ion import	1.56E-03
53	GO:0045324: late endosome to vacuole transport	1.56E-03
54	GO:0015713: phosphoglycerate transport	1.56E-03
55	GO:0051028: mRNA transport	1.63E-03
56	GO:0006970: response to osmotic stress	1.71E-03
57	GO:0080022: primary root development	1.76E-03
58	GO:0010182: sugar mediated signaling pathway	1.89E-03
59	GO:0043097: pyrimidine nucleoside salvage	1.99E-03
60	GO:0006623: protein targeting to vacuole	2.18E-03
61	GO:0006891: intra-Golgi vesicle-mediated transport	2.33E-03
62	GO:0006979: response to oxidative stress	2.36E-03
63	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.45E-03
64	GO:0006206: pyrimidine nucleobase metabolic process	2.45E-03
65	GO:0003006: developmental process involved in reproduction	2.45E-03
66	GO:0016032: viral process	2.49E-03
67	GO:0035556: intracellular signal transduction	2.56E-03
68	GO:0034389: lipid particle organization	2.94E-03
69	GO:0033962: cytoplasmic mRNA processing body assembly	2.94E-03
70	GO:0048280: vesicle fusion with Golgi apparatus	2.94E-03
71	GO:0006904: vesicle docking involved in exocytosis	2.99E-03
72	GO:0098869: cellular oxidant detoxification	3.47E-03
73	GO:0010050: vegetative phase change	3.47E-03
74	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.47E-03
75	GO:0006333: chromatin assembly or disassembly	3.47E-03
76	GO:0009816: defense response to bacterium, incompatible interaction	3.55E-03
77	GO:0048573: photoperiodism, flowering	3.95E-03
78	GO:0006102: isocitrate metabolic process	4.02E-03
79	GO:0009819: drought recovery	4.02E-03
80	GO:0006491: N-glycan processing	4.02E-03
81	GO:0006605: protein targeting	4.02E-03
82	GO:0009415: response to water	4.02E-03
83	GO:0010078: maintenance of root meristem identity	4.02E-03
84	GO:0006972: hyperosmotic response	4.60E-03
85	GO:0071482: cellular response to light stimulus	4.60E-03
86	GO:0060321: acceptance of pollen	4.60E-03
87	GO:0048193: Golgi vesicle transport	4.60E-03
88	GO:0006499: N-terminal protein myristoylation	4.82E-03
89	GO:0010345: suberin biosynthetic process	5.22E-03
90	GO:0009873: ethylene-activated signaling pathway	5.66E-03
91	GO:0006099: tricarboxylic acid cycle	5.79E-03
92	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.85E-03
93	GO:0006298: mismatch repair	6.51E-03
94	GO:0010215: cellulose microfibril organization	6.51E-03
95	GO:0010629: negative regulation of gene expression	6.51E-03
96	GO:0006896: Golgi to vacuole transport	6.51E-03
97	GO:0006535: cysteine biosynthetic process from serine	6.51E-03
98	GO:0012501: programmed cell death	7.92E-03
99	GO:0010152: pollen maturation	7.92E-03
100	GO:2000012: regulation of auxin polar transport	8.66E-03
101	GO:0009738: abscisic acid-activated signaling pathway	8.71E-03
102	GO:0009846: pollen germination	8.97E-03
103	GO:0009723: response to ethylene	9.28E-03
104	GO:0010143: cutin biosynthetic process	9.42E-03
105	GO:0002237: response to molecule of bacterial origin	9.42E-03
106	GO:0007034: vacuolar transport	9.42E-03
107	GO:0006468: protein phosphorylation	9.50E-03
108	GO:0010030: positive regulation of seed germination	1.02E-02
109	GO:0016192: vesicle-mediated transport	1.08E-02
110	GO:0010025: wax biosynthetic process	1.10E-02
111	GO:0034976: response to endoplasmic reticulum stress	1.10E-02
112	GO:0006289: nucleotide-excision repair	1.19E-02
113	GO:0019344: cysteine biosynthetic process	1.19E-02
114	GO:0006825: copper ion transport	1.27E-02
115	GO:0008299: isoprenoid biosynthetic process	1.27E-02
116	GO:0016575: histone deacetylation	1.27E-02
117	GO:0016310: phosphorylation	1.34E-02
118	GO:0009269: response to desiccation	1.36E-02
119	GO:0031408: oxylipin biosynthetic process	1.36E-02
120	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.54E-02
121	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.73E-02
122	GO:0042147: retrograde transport, endosome to Golgi	1.73E-02
123	GO:0010501: RNA secondary structure unwinding	1.83E-02
124	GO:0000413: protein peptidyl-prolyl isomerization	1.83E-02
125	GO:0010051: xylem and phloem pattern formation	1.83E-02
126	GO:0010118: stomatal movement	1.83E-02
127	GO:0042335: cuticle development	1.83E-02
128	GO:0009790: embryo development	2.02E-02
129	GO:0048544: recognition of pollen	2.03E-02
130	GO:0008654: phospholipid biosynthetic process	2.14E-02
131	GO:0010183: pollen tube guidance	2.14E-02
132	GO:0009749: response to glucose	2.14E-02
133	GO:0006633: fatty acid biosynthetic process	2.17E-02
134	GO:0010193: response to ozone	2.24E-02
135	GO:0009630: gravitropism	2.35E-02
136	GO:0007264: small GTPase mediated signal transduction	2.35E-02
137	GO:0010150: leaf senescence	2.38E-02
138	GO:0071281: cellular response to iron ion	2.46E-02
139	GO:0009414: response to water deprivation	2.55E-02
140	GO:0006914: autophagy	2.57E-02
141	GO:0042742: defense response to bacterium	2.64E-02
142	GO:0010286: heat acclimation	2.68E-02
143	GO:0071805: potassium ion transmembrane transport	2.68E-02
144	GO:0051607: defense response to virus	2.80E-02
145	GO:0016579: protein deubiquitination	2.80E-02
146	GO:0009911: positive regulation of flower development	2.91E-02
147	GO:0001666: response to hypoxia	2.91E-02
148	GO:0009737: response to abscisic acid	2.92E-02
149	GO:0042128: nitrate assimilation	3.15E-02
150	GO:0006950: response to stress	3.27E-02
151	GO:0006888: ER to Golgi vesicle-mediated transport	3.27E-02
152	GO:0016049: cell growth	3.40E-02
153	GO:0009555: pollen development	3.41E-02
154	GO:0008219: cell death	3.52E-02
155	GO:0030244: cellulose biosynthetic process	3.52E-02
156	GO:0006811: ion transport	3.77E-02
157	GO:0010043: response to zinc ion	3.90E-02
158	GO:0010119: regulation of stomatal movement	3.90E-02
159	GO:0009631: cold acclimation	3.90E-02
160	GO:0009867: jasmonic acid mediated signaling pathway	4.17E-02
161	GO:0016051: carbohydrate biosynthetic process	4.17E-02
162	GO:0006457: protein folding	4.68E-02
163	GO:0006887: exocytosis	4.71E-02
164	GO:0046777: protein autophosphorylation	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity	0.00E+00
2	GO:0080146: L-cysteine desulfhydrase activity	0.00E+00
3	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
4	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
5	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
6	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
7	GO:0004482: mRNA (guanine-N7-)-methyltransferase activity	0.00E+00
8	GO:0103073: anandamide amidohydrolase activity	0.00E+00
9	GO:0102077: oleamide hydrolase activity	0.00E+00
10	GO:0004370: glycerol kinase activity	0.00E+00
11	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.19E-04
12	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.27E-04
13	GO:0035671: enone reductase activity	2.27E-04
14	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.27E-04
15	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.27E-04
16	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.27E-04
17	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.27E-04
18	GO:0030544: Hsp70 protein binding	2.27E-04
19	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.27E-04
20	GO:0034450: ubiquitin-ubiquitin ligase activity	2.27E-04
21	GO:0019707: protein-cysteine S-acyltransferase activity	2.27E-04
22	GO:0004609: phosphatidylserine decarboxylase activity	5.05E-04
23	GO:0003994: aconitate hydratase activity	5.05E-04
24	GO:0015152: glucose-6-phosphate transmembrane transporter activity	5.05E-04
25	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.05E-04
26	GO:0003988: acetyl-CoA C-acyltransferase activity	5.05E-04
27	GO:0019200: carbohydrate kinase activity	5.05E-04
28	GO:0071917: triose-phosphate transmembrane transporter activity	8.21E-04
29	GO:0004180: carboxypeptidase activity	8.21E-04
30	GO:0005047: signal recognition particle binding	8.21E-04
31	GO:0019829: cation-transporting ATPase activity	8.21E-04
32	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.17E-03
33	GO:0004300: enoyl-CoA hydratase activity	1.17E-03
34	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.17E-03
35	GO:0048027: mRNA 5'-UTR binding	1.17E-03
36	GO:0004108: citrate (Si)-synthase activity	1.17E-03
37	GO:0030527: structural constituent of chromatin	1.17E-03
38	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.56E-03
39	GO:0015120: phosphoglycerate transmembrane transporter activity	1.56E-03
40	GO:0003729: mRNA binding	1.56E-03
41	GO:0005253: anion channel activity	1.56E-03
42	GO:0016004: phospholipase activator activity	1.56E-03
43	GO:0010294: abscisic acid glucosyltransferase activity	1.99E-03
44	GO:0004040: amidase activity	1.99E-03
45	GO:0004124: cysteine synthase activity	2.94E-03
46	GO:0070300: phosphatidic acid binding	2.94E-03
47	GO:0004849: uridine kinase activity	2.94E-03
48	GO:0003730: mRNA 3'-UTR binding	2.94E-03
49	GO:0004602: glutathione peroxidase activity	2.94E-03
50	GO:0015140: malate transmembrane transporter activity	3.47E-03
51	GO:0004869: cysteine-type endopeptidase inhibitor activity	4.02E-03
52	GO:0004525: ribonuclease III activity	4.02E-03
53	GO:0008142: oxysterol binding	4.60E-03
54	GO:0005267: potassium channel activity	4.60E-03
55	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.60E-03
56	GO:0005375: copper ion transmembrane transporter activity	4.60E-03
57	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.85E-03
58	GO:0000149: SNARE binding	6.05E-03
59	GO:0016301: kinase activity	6.51E-03
60	GO:0015020: glucuronosyltransferase activity	6.51E-03
61	GO:0004713: protein tyrosine kinase activity	6.51E-03
62	GO:0005509: calcium ion binding	6.96E-03
63	GO:0000976: transcription regulatory region sequence-specific DNA binding	7.92E-03
64	GO:0005315: inorganic phosphate transmembrane transporter activity	8.66E-03
65	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.66E-03
66	GO:0004407: histone deacetylase activity	1.19E-02
67	GO:0043130: ubiquitin binding	1.19E-02
68	GO:0043424: protein histidine kinase binding	1.27E-02
69	GO:0015079: potassium ion transmembrane transporter activity	1.27E-02
70	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.36E-02
71	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.36E-02
72	GO:0004672: protein kinase activity	1.56E-02
73	GO:0005507: copper ion binding	1.56E-02
74	GO:0003756: protein disulfide isomerase activity	1.64E-02
75	GO:0016853: isomerase activity	2.03E-02
76	GO:0004872: receptor activity	2.14E-02
77	GO:0005515: protein binding	2.33E-02
78	GO:0004197: cysteine-type endopeptidase activity	2.35E-02
79	GO:0005524: ATP binding	2.40E-02
80	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.46E-02
81	GO:0003684: damaged DNA binding	2.57E-02
82	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.03E-02
83	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.15E-02
84	GO:0008375: acetylglucosaminyltransferase activity	3.15E-02
85	GO:0004683: calmodulin-dependent protein kinase activity	3.27E-02
86	GO:0004004: ATP-dependent RNA helicase activity	3.27E-02
87	GO:0008236: serine-type peptidase activity	3.40E-02
88	GO:0005096: GTPase activator activity	3.65E-02
89	GO:0003682: chromatin binding	3.89E-02
90	GO:0050897: cobalt ion binding	3.90E-02
91	GO:0003746: translation elongation factor activity	4.17E-02
92	GO:0003697: single-stranded DNA binding	4.17E-02
93	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.43E-02
94	GO:0051539: 4 iron, 4 sulfur cluster binding	4.57E-02
95	GO:0005484: SNAP receptor activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0071942: XPC complex	0.00E+00
2	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
3	GO:0005785: signal recognition particle receptor complex	0.00E+00
4	GO:0071561: nucleus-vacuole junction	0.00E+00
5	GO:0005802: trans-Golgi network	1.32E-05
6	GO:0005768: endosome	2.12E-05
7	GO:0005794: Golgi apparatus	3.38E-05
8	GO:0016363: nuclear matrix	1.19E-04
9	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	2.27E-04
10	GO:0000152: nuclear ubiquitin ligase complex	2.27E-04
11	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	2.27E-04
12	GO:0030897: HOPS complex	5.05E-04
13	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	5.05E-04
14	GO:0005886: plasma membrane	5.58E-04
15	GO:0031902: late endosome membrane	8.83E-04
16	GO:0005783: endoplasmic reticulum	1.14E-03
17	GO:0000139: Golgi membrane	1.26E-03
18	GO:0005737: cytoplasm	1.62E-03
19	GO:0005770: late endosome	1.89E-03
20	GO:0030140: trans-Golgi network transport vesicle	2.45E-03
21	GO:0000815: ESCRT III complex	2.94E-03
22	GO:0030173: integral component of Golgi membrane	2.94E-03
23	GO:0012507: ER to Golgi transport vesicle membrane	4.02E-03
24	GO:0009705: plant-type vacuole membrane	4.43E-03
25	GO:0009514: glyoxysome	4.60E-03
26	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.60E-03
27	GO:0010494: cytoplasmic stress granule	5.22E-03
28	GO:0016021: integral component of membrane	5.96E-03
29	GO:0005829: cytosol	6.53E-03
30	GO:0005765: lysosomal membrane	7.20E-03
31	GO:0005773: vacuole	9.54E-03
32	GO:0005774: vacuolar membrane	9.72E-03
33	GO:0030176: integral component of endoplasmic reticulum membrane	1.02E-02
34	GO:0043234: protein complex	1.10E-02
35	GO:0005777: peroxisome	1.13E-02
36	GO:0010008: endosome membrane	1.18E-02
37	GO:0005789: endoplasmic reticulum membrane	1.67E-02
38	GO:0000145: exocyst	2.35E-02
39	GO:0000785: chromatin	2.35E-02
40	GO:0000932: P-body	2.91E-02
41	GO:0005788: endoplasmic reticulum lumen	3.03E-02
42	GO:0000151: ubiquitin ligase complex	3.52E-02
43	GO:0005643: nuclear pore	3.52E-02
44	GO:0015934: large ribosomal subunit	3.90E-02
45	GO:0000325: plant-type vacuole	3.90E-02
46	GO:0000786: nucleosome	4.03E-02
47	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.04E-02
48	GO:0031201: SNARE complex	4.71E-02
49	GO:0090406: pollen tube	4.98E-02