GO Enrichment Analysis of Co-expressed Genes with
AT5G46570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006907: pinocytosis | 0.00E+00 |
| 2 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.96E-05 |
| 3 | GO:0008616: queuosine biosynthetic process | 4.35E-05 |
| 4 | GO:0090391: granum assembly | 7.77E-05 |
| 5 | GO:0006013: mannose metabolic process | 7.77E-05 |
| 6 | GO:0009828: plant-type cell wall loosening | 9.13E-05 |
| 7 | GO:0010239: chloroplast mRNA processing | 1.17E-04 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 1.33E-04 |
| 9 | GO:0010438: cellular response to sulfur starvation | 2.09E-04 |
| 10 | GO:0009759: indole glucosinolate biosynthetic process | 2.59E-04 |
| 11 | GO:1901259: chloroplast rRNA processing | 3.11E-04 |
| 12 | GO:0009664: plant-type cell wall organization | 3.14E-04 |
| 13 | GO:0010196: nonphotochemical quenching | 3.66E-04 |
| 14 | GO:0006353: DNA-templated transcription, termination | 4.23E-04 |
| 15 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.04E-04 |
| 16 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.68E-04 |
| 17 | GO:0002213: defense response to insect | 8.01E-04 |
| 18 | GO:0007623: circadian rhythm | 8.05E-04 |
| 19 | GO:0045490: pectin catabolic process | 8.05E-04 |
| 20 | GO:0000162: tryptophan biosynthetic process | 1.08E-03 |
| 21 | GO:0009826: unidimensional cell growth | 1.17E-03 |
| 22 | GO:0016998: cell wall macromolecule catabolic process | 1.31E-03 |
| 23 | GO:0030245: cellulose catabolic process | 1.39E-03 |
| 24 | GO:0010017: red or far-red light signaling pathway | 1.39E-03 |
| 25 | GO:0015979: photosynthesis | 1.70E-03 |
| 26 | GO:0080022: primary root development | 1.73E-03 |
| 27 | GO:0009958: positive gravitropism | 1.82E-03 |
| 28 | GO:0042752: regulation of circadian rhythm | 1.91E-03 |
| 29 | GO:0000302: response to reactive oxygen species | 2.09E-03 |
| 30 | GO:0000910: cytokinesis | 2.57E-03 |
| 31 | GO:0010027: thylakoid membrane organization | 2.68E-03 |
| 32 | GO:0016126: sterol biosynthetic process | 2.68E-03 |
| 33 | GO:0010411: xyloglucan metabolic process | 2.99E-03 |
| 34 | GO:0000160: phosphorelay signal transduction system | 3.31E-03 |
| 35 | GO:0009735: response to cytokinin | 3.51E-03 |
| 36 | GO:0016051: carbohydrate biosynthetic process | 3.76E-03 |
| 37 | GO:0034599: cellular response to oxidative stress | 3.87E-03 |
| 38 | GO:0030001: metal ion transport | 4.11E-03 |
| 39 | GO:0010114: response to red light | 4.47E-03 |
| 40 | GO:0042546: cell wall biogenesis | 4.59E-03 |
| 41 | GO:0009736: cytokinin-activated signaling pathway | 5.48E-03 |
| 42 | GO:0042545: cell wall modification | 6.84E-03 |
| 43 | GO:0009624: response to nematode | 6.99E-03 |
| 44 | GO:0071555: cell wall organization | 7.73E-03 |
| 45 | GO:0042744: hydrogen peroxide catabolic process | 8.94E-03 |
| 46 | GO:0009451: RNA modification | 1.04E-02 |
| 47 | GO:0009737: response to abscisic acid | 1.65E-02 |
| 48 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.66E-02 |
| 49 | GO:0046777: protein autophosphorylation | 1.70E-02 |
| 50 | GO:0045454: cell redox homeostasis | 1.84E-02 |
| 51 | GO:0016042: lipid catabolic process | 2.10E-02 |
| 52 | GO:0009753: response to jasmonic acid | 2.25E-02 |
| 53 | GO:0006357: regulation of transcription from RNA polymerase II promoter | 2.61E-02 |
| 54 | GO:0045893: positive regulation of transcription, DNA-templated | 3.55E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047793: cycloeucalenol cycloisomerase activity | 0.00E+00 |
| 2 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.67E-05 |
| 3 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.67E-05 |
| 4 | GO:0008479: queuine tRNA-ribosyltransferase activity | 4.35E-05 |
| 5 | GO:0016851: magnesium chelatase activity | 1.17E-04 |
| 6 | GO:0004130: cytochrome-c peroxidase activity | 2.59E-04 |
| 7 | GO:0004559: alpha-mannosidase activity | 3.11E-04 |
| 8 | GO:0015020: glucuronosyltransferase activity | 6.68E-04 |
| 9 | GO:0030570: pectate lyase activity | 1.47E-03 |
| 10 | GO:0008810: cellulase activity | 1.47E-03 |
| 11 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.09E-03 |
| 12 | GO:0000156: phosphorelay response regulator activity | 2.28E-03 |
| 13 | GO:0051015: actin filament binding | 2.28E-03 |
| 14 | GO:0008483: transaminase activity | 2.48E-03 |
| 15 | GO:0008375: acetylglucosaminyltransferase activity | 2.88E-03 |
| 16 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.99E-03 |
| 17 | GO:0043621: protein self-association | 4.71E-03 |
| 18 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.05E-03 |
| 19 | GO:0030246: carbohydrate binding | 5.14E-03 |
| 20 | GO:0045330: aspartyl esterase activity | 5.88E-03 |
| 21 | GO:0030599: pectinesterase activity | 6.70E-03 |
| 22 | GO:0019843: rRNA binding | 8.17E-03 |
| 23 | GO:0016829: lyase activity | 8.63E-03 |
| 24 | GO:0030170: pyridoxal phosphate binding | 8.79E-03 |
| 25 | GO:0046910: pectinesterase inhibitor activity | 9.74E-03 |
| 26 | GO:0004601: peroxidase activity | 1.39E-02 |
| 27 | GO:0016788: hydrolase activity, acting on ester bonds | 1.41E-02 |
| 28 | GO:0052689: carboxylic ester hydrolase activity | 1.74E-02 |
| 29 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 1.84E-02 |
| 30 | GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding | 1.99E-02 |
| 31 | GO:0005515: protein binding | 2.27E-02 |
| 32 | GO:0004519: endonuclease activity | 2.27E-02 |
| 33 | GO:0016887: ATPase activity | 2.92E-02 |
| 34 | GO:0004674: protein serine/threonine kinase activity | 3.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0005618: cell wall | 1.27E-06 |
| 3 | GO:0009505: plant-type cell wall | 1.40E-05 |
| 4 | GO:0009515: granal stacked thylakoid | 1.67E-05 |
| 5 | GO:0010007: magnesium chelatase complex | 7.77E-05 |
| 6 | GO:0005576: extracellular region | 1.44E-04 |
| 7 | GO:0009535: chloroplast thylakoid membrane | 4.63E-04 |
| 8 | GO:0042644: chloroplast nucleoid | 5.42E-04 |
| 9 | GO:0009534: chloroplast thylakoid | 5.59E-04 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 5.92E-04 |
| 11 | GO:0005884: actin filament | 7.34E-04 |
| 12 | GO:0009508: plastid chromosome | 8.70E-04 |
| 13 | GO:0005578: proteinaceous extracellular matrix | 8.70E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 9.39E-04 |
| 15 | GO:0009523: photosystem II | 2.00E-03 |
| 16 | GO:0009295: nucleoid | 2.48E-03 |
| 17 | GO:0031977: thylakoid lumen | 4.23E-03 |
| 18 | GO:0005856: cytoskeleton | 4.83E-03 |
| 19 | GO:0048046: apoplast | 5.35E-03 |
| 20 | GO:0016020: membrane | 5.43E-03 |
| 21 | GO:0009506: plasmodesma | 6.76E-03 |
| 22 | GO:0000139: Golgi membrane | 1.05E-02 |
| 23 | GO:0009507: chloroplast | 1.43E-02 |
| 24 | GO:0043231: intracellular membrane-bounded organelle | 2.29E-02 |
| 25 | GO:0005774: vacuolar membrane | 2.69E-02 |
| 26 | GO:0009941: chloroplast envelope | 3.65E-02 |
| 27 | GO:0009579: thylakoid | 3.66E-02 |
| 28 | GO:0005802: trans-Golgi network | 4.51E-02 |
| 29 | GO:0005768: endosome | 4.94E-02 |