GO Enrichment Analysis of Co-expressed Genes with
AT5G46390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 3 | GO:0000272: polysaccharide catabolic process | 1.75E-07 |
| 4 | GO:0019253: reductive pentose-phosphate cycle | 3.66E-07 |
| 5 | GO:0009767: photosynthetic electron transport chain | 3.71E-05 |
| 6 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 7.88E-05 |
| 7 | GO:1904143: positive regulation of carotenoid biosynthetic process | 7.88E-05 |
| 8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 7.88E-05 |
| 9 | GO:0016117: carotenoid biosynthetic process | 1.16E-04 |
| 10 | GO:0006810: transport | 1.23E-04 |
| 11 | GO:0006696: ergosterol biosynthetic process | 1.37E-04 |
| 12 | GO:0009416: response to light stimulus | 1.45E-04 |
| 13 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.04E-04 |
| 14 | GO:0033014: tetrapyrrole biosynthetic process | 2.04E-04 |
| 15 | GO:2001141: regulation of RNA biosynthetic process | 2.04E-04 |
| 16 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.04E-04 |
| 17 | GO:0045727: positive regulation of translation | 2.76E-04 |
| 18 | GO:0006546: glycine catabolic process | 2.76E-04 |
| 19 | GO:0006479: protein methylation | 2.76E-04 |
| 20 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.76E-04 |
| 21 | GO:0010236: plastoquinone biosynthetic process | 3.53E-04 |
| 22 | GO:0042026: protein refolding | 5.20E-04 |
| 23 | GO:1901259: chloroplast rRNA processing | 5.20E-04 |
| 24 | GO:0006458: 'de novo' protein folding | 5.20E-04 |
| 25 | GO:0009744: response to sucrose | 5.38E-04 |
| 26 | GO:0008610: lipid biosynthetic process | 6.99E-04 |
| 27 | GO:0005978: glycogen biosynthetic process | 6.99E-04 |
| 28 | GO:0048193: Golgi vesicle transport | 7.94E-04 |
| 29 | GO:0009657: plastid organization | 7.94E-04 |
| 30 | GO:0032544: plastid translation | 7.94E-04 |
| 31 | GO:0071482: cellular response to light stimulus | 7.94E-04 |
| 32 | GO:0006096: glycolytic process | 8.40E-04 |
| 33 | GO:0006783: heme biosynthetic process | 8.92E-04 |
| 34 | GO:0046686: response to cadmium ion | 8.95E-04 |
| 35 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.92E-04 |
| 36 | GO:0009773: photosynthetic electron transport in photosystem I | 1.20E-03 |
| 37 | GO:0006415: translational termination | 1.20E-03 |
| 38 | GO:0019684: photosynthesis, light reaction | 1.20E-03 |
| 39 | GO:0006352: DNA-templated transcription, initiation | 1.20E-03 |
| 40 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.20E-03 |
| 41 | GO:0006006: glucose metabolic process | 1.43E-03 |
| 42 | GO:0061077: chaperone-mediated protein folding | 2.19E-03 |
| 43 | GO:0009658: chloroplast organization | 2.59E-03 |
| 44 | GO:0042631: cellular response to water deprivation | 2.90E-03 |
| 45 | GO:0009741: response to brassinosteroid | 3.05E-03 |
| 46 | GO:0009646: response to absence of light | 3.20E-03 |
| 47 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.31E-03 |
| 48 | GO:0019252: starch biosynthetic process | 3.36E-03 |
| 49 | GO:0032502: developmental process | 3.68E-03 |
| 50 | GO:0009409: response to cold | 4.16E-03 |
| 51 | GO:0006629: lipid metabolic process | 4.70E-03 |
| 52 | GO:0048573: photoperiodism, flowering | 5.05E-03 |
| 53 | GO:0009817: defense response to fungus, incompatible interaction | 5.42E-03 |
| 54 | GO:0009407: toxin catabolic process | 5.79E-03 |
| 55 | GO:0009853: photorespiration | 6.38E-03 |
| 56 | GO:0009735: response to cytokinin | 7.61E-03 |
| 57 | GO:0009636: response to toxic substance | 8.24E-03 |
| 58 | GO:0006364: rRNA processing | 9.36E-03 |
| 59 | GO:0006396: RNA processing | 1.22E-02 |
| 60 | GO:0009742: brassinosteroid mediated signaling pathway | 1.25E-02 |
| 61 | GO:0042742: defense response to bacterium | 1.69E-02 |
| 62 | GO:0006979: response to oxidative stress | 1.71E-02 |
| 63 | GO:0007623: circadian rhythm | 1.77E-02 |
| 64 | GO:0010468: regulation of gene expression | 2.00E-02 |
| 65 | GO:0055114: oxidation-reduction process | 2.73E-02 |
| 66 | GO:0045454: cell redox homeostasis | 3.19E-02 |
| 67 | GO:0008152: metabolic process | 3.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 2 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 3 | GO:0003858: 3-hydroxybutyrate dehydrogenase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 6 | GO:0102229: amylopectin maltohydrolase activity | 3.30E-06 |
| 7 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.83E-06 |
| 8 | GO:0016161: beta-amylase activity | 4.83E-06 |
| 9 | GO:0004325: ferrochelatase activity | 3.12E-05 |
| 10 | GO:0051996: squalene synthase activity | 3.12E-05 |
| 11 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 7.88E-05 |
| 12 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 7.88E-05 |
| 13 | GO:0004618: phosphoglycerate kinase activity | 7.88E-05 |
| 14 | GO:0010297: heteropolysaccharide binding | 7.88E-05 |
| 15 | GO:0004047: aminomethyltransferase activity | 7.88E-05 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.37E-04 |
| 17 | GO:0004751: ribose-5-phosphate isomerase activity | 1.37E-04 |
| 18 | GO:0030267: glyoxylate reductase (NADP) activity | 1.37E-04 |
| 19 | GO:0016149: translation release factor activity, codon specific | 2.04E-04 |
| 20 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 2.04E-04 |
| 21 | GO:0008276: protein methyltransferase activity | 2.04E-04 |
| 22 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.04E-04 |
| 23 | GO:0016987: sigma factor activity | 2.76E-04 |
| 24 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 2.76E-04 |
| 25 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 2.76E-04 |
| 26 | GO:0001053: plastid sigma factor activity | 2.76E-04 |
| 27 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.76E-04 |
| 28 | GO:0008374: O-acyltransferase activity | 3.53E-04 |
| 29 | GO:0080030: methyl indole-3-acetate esterase activity | 4.34E-04 |
| 30 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 5.20E-04 |
| 31 | GO:0003824: catalytic activity | 5.28E-04 |
| 32 | GO:0043295: glutathione binding | 6.07E-04 |
| 33 | GO:0051287: NAD binding | 6.46E-04 |
| 34 | GO:0003747: translation release factor activity | 8.92E-04 |
| 35 | GO:0044183: protein binding involved in protein folding | 1.20E-03 |
| 36 | GO:0019843: rRNA binding | 1.24E-03 |
| 37 | GO:0008081: phosphoric diester hydrolase activity | 1.43E-03 |
| 38 | GO:0016787: hydrolase activity | 1.44E-03 |
| 39 | GO:0050662: coenzyme binding | 3.20E-03 |
| 40 | GO:0048038: quinone binding | 3.51E-03 |
| 41 | GO:0008483: transaminase activity | 4.17E-03 |
| 42 | GO:0016597: amino acid binding | 4.34E-03 |
| 43 | GO:0050897: cobalt ion binding | 5.99E-03 |
| 44 | GO:0050661: NADP binding | 6.98E-03 |
| 45 | GO:0004364: glutathione transferase activity | 7.39E-03 |
| 46 | GO:0005198: structural molecule activity | 8.24E-03 |
| 47 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-03 |
| 48 | GO:0016740: transferase activity | 1.02E-02 |
| 49 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.08E-02 |
| 50 | GO:0022857: transmembrane transporter activity | 1.15E-02 |
| 51 | GO:0051082: unfolded protein binding | 1.20E-02 |
| 52 | GO:0005509: calcium ion binding | 1.56E-02 |
| 53 | GO:0016788: hydrolase activity, acting on ester bonds | 2.44E-02 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 2.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030931: heterotetrameric ADPG pyrophosphorylase complex | 0.00E+00 |
| 2 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 7.04E-15 |
| 4 | GO:0009570: chloroplast stroma | 7.77E-13 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.03E-08 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.92E-07 |
| 7 | GO:0009941: chloroplast envelope | 2.45E-07 |
| 8 | GO:0010319: stromule | 5.41E-06 |
| 9 | GO:0030095: chloroplast photosystem II | 4.29E-05 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 7.08E-05 |
| 11 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 7.88E-05 |
| 12 | GO:0019898: extrinsic component of membrane | 1.60E-04 |
| 13 | GO:0009534: chloroplast thylakoid | 2.00E-04 |
| 14 | GO:0005960: glycine cleavage complex | 2.04E-04 |
| 15 | GO:0031969: chloroplast membrane | 3.52E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 3.53E-04 |
| 17 | GO:0048046: apoplast | 6.78E-04 |
| 18 | GO:0010287: plastoglobule | 1.18E-03 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 1.24E-03 |
| 20 | GO:0009579: thylakoid | 1.46E-03 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.08E-02 |
| 22 | GO:0005759: mitochondrial matrix | 1.65E-02 |
| 23 | GO:0005773: vacuole | 2.35E-02 |