Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G46350

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0033587: shikimate biosynthetic process0.00E+00
2GO:0051238: sequestering of metal ion0.00E+00
3GO:0006182: cGMP biosynthetic process0.00E+00
4GO:0072722: response to amitrole0.00E+00
5GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
6GO:0010055: atrichoblast differentiation0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:0046680: response to DDT0.00E+00
9GO:0046865: terpenoid transport0.00E+00
10GO:0006793: phosphorus metabolic process0.00E+00
11GO:0071456: cellular response to hypoxia3.56E-10
12GO:0042742: defense response to bacterium1.97E-07
13GO:0006468: protein phosphorylation1.77E-06
14GO:0006874: cellular calcium ion homeostasis1.54E-05
15GO:0010120: camalexin biosynthetic process2.77E-05
16GO:0009617: response to bacterium3.01E-05
17GO:0010104: regulation of ethylene-activated signaling pathway6.19E-05
18GO:0006032: chitin catabolic process6.45E-05
19GO:0009682: induced systemic resistance8.14E-05
20GO:0009636: response to toxic substance8.83E-05
21GO:0006855: drug transmembrane transport9.59E-05
22GO:0006536: glutamate metabolic process1.09E-04
23GO:0010150: leaf senescence1.35E-04
24GO:0002237: response to molecule of bacterial origin1.47E-04
25GO:0009697: salicylic acid biosynthetic process1.68E-04
26GO:0009627: systemic acquired resistance1.86E-04
27GO:0009817: defense response to fungus, incompatible interaction2.43E-04
28GO:0009407: toxin catabolic process2.86E-04
29GO:0009751: response to salicylic acid2.99E-04
30GO:0006952: defense response3.33E-04
31GO:1900057: positive regulation of leaf senescence4.14E-04
32GO:0042759: long-chain fatty acid biosynthetic process4.32E-04
33GO:0032107: regulation of response to nutrient levels4.32E-04
34GO:1903648: positive regulation of chlorophyll catabolic process4.32E-04
35GO:0015760: glucose-6-phosphate transport4.32E-04
36GO:1990641: response to iron ion starvation4.32E-04
37GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.32E-04
38GO:0010726: positive regulation of hydrogen peroxide metabolic process4.32E-04
39GO:0000032: cell wall mannoprotein biosynthetic process4.32E-04
40GO:1901183: positive regulation of camalexin biosynthetic process4.32E-04
41GO:0030091: protein repair5.18E-04
42GO:0051707: response to other organism5.36E-04
43GO:0010204: defense response signaling pathway, resistance gene-independent6.32E-04
44GO:0010112: regulation of systemic acquired resistance7.56E-04
45GO:0002229: defense response to oomycetes7.72E-04
46GO:0051592: response to calcium ion9.33E-04
47GO:1902066: regulation of cell wall pectin metabolic process9.33E-04
48GO:0048569: post-embryonic animal organ development9.33E-04
49GO:0090057: root radial pattern formation9.33E-04
50GO:0009866: induced systemic resistance, ethylene mediated signaling pathway9.33E-04
51GO:0010163: high-affinity potassium ion import9.33E-04
52GO:0044419: interspecies interaction between organisms9.33E-04
53GO:0006101: citrate metabolic process9.33E-04
54GO:0043066: negative regulation of apoptotic process9.33E-04
55GO:0015712: hexose phosphate transport9.33E-04
56GO:0060919: auxin influx9.33E-04
57GO:0010252: auxin homeostasis9.82E-04
58GO:0009688: abscisic acid biosynthetic process1.04E-03
59GO:0000272: polysaccharide catabolic process1.19E-03
60GO:0009626: plant-type hypersensitive response1.20E-03
61GO:0009620: response to fungus1.25E-03
62GO:0009624: response to nematode1.44E-03
63GO:0035436: triose phosphate transmembrane transport1.52E-03
64GO:0010351: lithium ion transport1.52E-03
65GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process1.52E-03
66GO:0010272: response to silver ion1.52E-03
67GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.52E-03
68GO:0015692: lead ion transport1.52E-03
69GO:0033591: response to L-ascorbic acid1.52E-03
70GO:0048281: inflorescence morphogenesis1.52E-03
71GO:0015714: phosphoenolpyruvate transport1.52E-03
72GO:0080168: abscisic acid transport1.52E-03
73GO:0048586: regulation of long-day photoperiodism, flowering1.52E-03
74GO:0032922: circadian regulation of gene expression1.52E-03
75GO:0071367: cellular response to brassinosteroid stimulus1.52E-03
76GO:1901672: positive regulation of systemic acquired resistance1.52E-03
77GO:0034051: negative regulation of plant-type hypersensitive response1.52E-03
78GO:0070588: calcium ion transmembrane transport1.96E-03
79GO:0055114: oxidation-reduction process2.05E-03
80GO:0006882: cellular zinc ion homeostasis2.19E-03
81GO:0046513: ceramide biosynthetic process2.19E-03
82GO:0046836: glycolipid transport2.19E-03
83GO:0045017: glycerolipid biosynthetic process2.19E-03
84GO:0010116: positive regulation of abscisic acid biosynthetic process2.19E-03
85GO:0009298: GDP-mannose biosynthetic process2.19E-03
86GO:0010200: response to chitin2.42E-03
87GO:0016998: cell wall macromolecule catabolic process2.94E-03
88GO:0080142: regulation of salicylic acid biosynthetic process2.95E-03
89GO:0010109: regulation of photosynthesis2.95E-03
90GO:0045227: capsule polysaccharide biosynthetic process2.95E-03
91GO:0033358: UDP-L-arabinose biosynthetic process2.95E-03
92GO:0015713: phosphoglycerate transport2.95E-03
93GO:0006869: lipid transport3.69E-03
94GO:0006097: glyoxylate cycle3.78E-03
95GO:0000304: response to singlet oxygen3.78E-03
96GO:0034052: positive regulation of plant-type hypersensitive response3.78E-03
97GO:0045487: gibberellin catabolic process3.78E-03
98GO:0032259: methylation4.20E-03
99GO:0042391: regulation of membrane potential4.48E-03
100GO:0002238: response to molecule of fungal origin4.68E-03
101GO:0009643: photosynthetic acclimation4.68E-03
102GO:0050665: hydrogen peroxide biosynthetic process4.68E-03
103GO:0006561: proline biosynthetic process4.68E-03
104GO:0010942: positive regulation of cell death4.68E-03
105GO:0015691: cadmium ion transport4.68E-03
106GO:0010256: endomembrane system organization4.68E-03
107GO:0010315: auxin efflux4.68E-03
108GO:0060918: auxin transport4.68E-03
109GO:0009809: lignin biosynthetic process4.70E-03
110GO:0006979: response to oxidative stress5.37E-03
111GO:0009854: oxidative photosynthetic carbon pathway5.64E-03
112GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.64E-03
113GO:0045926: negative regulation of growth5.64E-03
114GO:0010193: response to ozone5.97E-03
115GO:1902074: response to salt6.67E-03
116GO:1900056: negative regulation of leaf senescence6.67E-03
117GO:0030026: cellular manganese ion homeostasis6.67E-03
118GO:0050829: defense response to Gram-negative bacterium6.67E-03
119GO:0000122: negative regulation of transcription from RNA polymerase II promoter6.67E-03
120GO:2000070: regulation of response to water deprivation7.76E-03
121GO:0006102: isocitrate metabolic process7.76E-03
122GO:0009819: drought recovery7.76E-03
123GO:0009642: response to light intensity7.76E-03
124GO:0009615: response to virus8.65E-03
125GO:0009808: lignin metabolic process8.91E-03
126GO:0006075: (1->3)-beta-D-glucan biosynthetic process8.91E-03
127GO:0001558: regulation of cell growth8.91E-03
128GO:0007186: G-protein coupled receptor signaling pathway8.91E-03
129GO:0050832: defense response to fungus9.65E-03
130GO:0006098: pentose-phosphate shunt1.01E-02
131GO:0034765: regulation of ion transmembrane transport1.01E-02
132GO:0008219: cell death1.13E-02
133GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.14E-02
134GO:0010162: seed dormancy process1.27E-02
135GO:0055062: phosphate ion homeostasis1.27E-02
136GO:0007064: mitotic sister chromatid cohesion1.27E-02
137GO:0009870: defense response signaling pathway, resistance gene-dependent1.27E-02
138GO:0005975: carbohydrate metabolic process1.29E-02
139GO:0007568: aging1.31E-02
140GO:0009631: cold acclimation1.31E-02
141GO:0040008: regulation of growth1.40E-02
142GO:0009089: lysine biosynthetic process via diaminopimelate1.41E-02
143GO:0045087: innate immune response1.44E-02
144GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.55E-02
145GO:0012501: programmed cell death1.55E-02
146GO:0002213: defense response to insect1.55E-02
147GO:0055046: microgametogenesis1.70E-02
148GO:0009718: anthocyanin-containing compound biosynthetic process1.70E-02
149GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.70E-02
150GO:0042542: response to hydrogen peroxide1.79E-02
151GO:0010540: basipetal auxin transport1.85E-02
152GO:0009744: response to sucrose1.86E-02
153GO:0010053: root epidermal cell differentiation2.01E-02
154GO:0009225: nucleotide-sugar metabolic process2.01E-02
155GO:0042343: indole glucosinolate metabolic process2.01E-02
156GO:0019853: L-ascorbic acid biosynthetic process2.01E-02
157GO:0031347: regulation of defense response2.25E-02
158GO:2000377: regulation of reactive oxygen species metabolic process2.33E-02
159GO:0005992: trehalose biosynthetic process2.33E-02
160GO:0006812: cation transport2.34E-02
161GO:0051302: regulation of cell division2.50E-02
162GO:0098542: defense response to other organism2.68E-02
163GO:0010431: seed maturation2.68E-02
164GO:0031348: negative regulation of defense response2.85E-02
165GO:2000022: regulation of jasmonic acid mediated signaling pathway2.85E-02
166GO:0071369: cellular response to ethylene stimulus3.04E-02
167GO:0010227: floral organ abscission3.04E-02
168GO:0006012: galactose metabolic process3.04E-02
169GO:0071215: cellular response to abscisic acid stimulus3.04E-02
170GO:0009686: gibberellin biosynthetic process3.04E-02
171GO:0010584: pollen exine formation3.22E-02
172GO:0006817: phosphate ion transport3.22E-02
173GO:0009561: megagametogenesis3.22E-02
174GO:0080167: response to karrikin3.37E-02
175GO:0070417: cellular response to cold3.41E-02
176GO:0042631: cellular response to water deprivation3.61E-02
177GO:0009416: response to light stimulus3.79E-02
178GO:0008360: regulation of cell shape3.81E-02
179GO:0009958: positive gravitropism3.81E-02
180GO:0006885: regulation of pH3.81E-02
181GO:0010154: fruit development3.81E-02
182GO:0006814: sodium ion transport4.01E-02
183GO:0042752: regulation of circadian rhythm4.01E-02
184GO:0009646: response to absence of light4.01E-02
185GO:0048544: recognition of pollen4.01E-02
186GO:0009851: auxin biosynthetic process4.21E-02
187GO:0006623: protein targeting to vacuole4.21E-02
188GO:0009749: response to glucose4.21E-02
189GO:0000302: response to reactive oxygen species4.42E-02
190GO:0045893: positive regulation of transcription, DNA-templated4.62E-02
191GO:0009630: gravitropism4.63E-02
192GO:1901657: glycosyl compound metabolic process4.85E-02
193GO:0009733: response to auxin4.89E-02
RankGO TermAdjusted P value
1GO:0003796: lysozyme activity0.00E+00
2GO:0035885: exochitinase activity0.00E+00
3GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
4GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
5GO:0008843: endochitinase activity0.00E+00
6GO:0010279: indole-3-acetic acid amido synthetase activity1.13E-06
7GO:0016301: kinase activity1.27E-06
8GO:0004674: protein serine/threonine kinase activity5.18E-06
9GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.09E-05
10GO:0005524: ATP binding3.60E-05
11GO:0004351: glutamate decarboxylase activity6.19E-05
12GO:0005217: intracellular ligand-gated ion channel activity1.74E-04
13GO:0004970: ionotropic glutamate receptor activity1.74E-04
14GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.34E-04
15GO:0005516: calmodulin binding2.61E-04
16GO:0015238: drug transmembrane transporter activity2.64E-04
17GO:0033743: peptide-methionine (R)-S-oxide reductase activity3.21E-04
18GO:0010285: L,L-diaminopimelate aminotransferase activity4.32E-04
19GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor4.32E-04
20GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.32E-04
21GO:0004476: mannose-6-phosphate isomerase activity4.32E-04
22GO:0050660: flavin adenine dinucleotide binding4.87E-04
23GO:0004364: glutathione transferase activity5.04E-04
24GO:0015297: antiporter activity6.67E-04
25GO:0050291: sphingosine N-acyltransferase activity9.33E-04
26GO:0045543: gibberellin 2-beta-dioxygenase activity9.33E-04
27GO:0003994: aconitate hydratase activity9.33E-04
28GO:0015152: glucose-6-phosphate transmembrane transporter activity9.33E-04
29GO:0004568: chitinase activity1.04E-03
30GO:0008171: O-methyltransferase activity1.04E-03
31GO:0008559: xenobiotic-transporting ATPase activity1.19E-03
32GO:0009055: electron carrier activity1.40E-03
33GO:0004383: guanylate cyclase activity1.52E-03
34GO:0071917: triose-phosphate transmembrane transporter activity1.52E-03
35GO:0000975: regulatory region DNA binding1.52E-03
36GO:0042409: caffeoyl-CoA O-methyltransferase activity1.52E-03
37GO:0005388: calcium-transporting ATPase activity1.55E-03
38GO:0008061: chitin binding1.96E-03
39GO:0030246: carbohydrate binding2.17E-03
40GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity2.19E-03
41GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity2.19E-03
42GO:0017089: glycolipid transporter activity2.19E-03
43GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity2.19E-03
44GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity2.19E-03
45GO:0009916: alternative oxidase activity2.95E-03
46GO:0008891: glycolate oxidase activity2.95E-03
47GO:0015120: phosphoglycerate transmembrane transporter activity2.95E-03
48GO:0015368: calcium:cation antiporter activity2.95E-03
49GO:0050373: UDP-arabinose 4-epimerase activity2.95E-03
50GO:0051861: glycolipid binding2.95E-03
51GO:0015369: calcium:proton antiporter activity2.95E-03
52GO:0010328: auxin influx transmembrane transporter activity2.95E-03
53GO:0004031: aldehyde oxidase activity2.95E-03
54GO:0050302: indole-3-acetaldehyde oxidase activity2.95E-03
55GO:0004930: G-protein coupled receptor activity2.95E-03
56GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.78E-03
57GO:0004672: protein kinase activity4.47E-03
58GO:0005249: voltage-gated potassium channel activity4.48E-03
59GO:0030551: cyclic nucleotide binding4.48E-03
60GO:0004332: fructose-bisphosphate aldolase activity4.68E-03
61GO:0008113: peptide-methionine (S)-S-oxide reductase activity5.64E-03
62GO:0005242: inward rectifier potassium channel activity5.64E-03
63GO:0102391: decanoate--CoA ligase activity5.64E-03
64GO:0003978: UDP-glucose 4-epimerase activity5.64E-03
65GO:0004144: diacylglycerol O-acyltransferase activity5.64E-03
66GO:0005085: guanyl-nucleotide exchange factor activity6.67E-03
67GO:0004467: long-chain fatty acid-CoA ligase activity6.67E-03
68GO:0102425: myricetin 3-O-glucosyltransferase activity6.67E-03
69GO:0102360: daphnetin 3-O-glucosyltransferase activity6.67E-03
70GO:0008483: transaminase activity7.70E-03
71GO:0015491: cation:cation antiporter activity7.76E-03
72GO:0047893: flavonol 3-O-glucosyltransferase activity7.76E-03
73GO:0004033: aldo-keto reductase (NADP) activity7.76E-03
74GO:0003843: 1,3-beta-D-glucan synthase activity8.91E-03
75GO:0030247: polysaccharide binding1.02E-02
76GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.08E-02
77GO:0030170: pyridoxal phosphate binding1.12E-02
78GO:0004713: protein tyrosine kinase activity1.27E-02
79GO:0030145: manganese ion binding1.31E-02
80GO:0008422: beta-glucosidase activity1.57E-02
81GO:0043565: sequence-specific DNA binding1.68E-02
82GO:0005315: inorganic phosphate transmembrane transporter activity1.70E-02
83GO:0010329: auxin efflux transmembrane transporter activity1.70E-02
84GO:0004022: alcohol dehydrogenase (NAD) activity1.70E-02
85GO:0005215: transporter activity1.82E-02
86GO:0031624: ubiquitin conjugating enzyme binding1.85E-02
87GO:0030552: cAMP binding2.01E-02
88GO:0004867: serine-type endopeptidase inhibitor activity2.01E-02
89GO:0030553: cGMP binding2.01E-02
90GO:0008134: transcription factor binding2.33E-02
91GO:0001046: core promoter sequence-specific DNA binding2.33E-02
92GO:0008168: methyltransferase activity2.46E-02
93GO:0005216: ion channel activity2.50E-02
94GO:0008289: lipid binding2.65E-02
95GO:0035251: UDP-glucosyltransferase activity2.68E-02
96GO:0004842: ubiquitin-protein transferase activity2.77E-02
97GO:0043531: ADP binding2.89E-02
98GO:0045735: nutrient reservoir activity2.97E-02
99GO:0004499: N,N-dimethylaniline monooxygenase activity3.22E-02
100GO:0005509: calcium ion binding3.55E-02
101GO:0005451: monovalent cation:proton antiporter activity3.61E-02
102GO:0052689: carboxylic ester hydrolase activity3.81E-02
103GO:0015299: solute:proton antiporter activity4.01E-02
104GO:0010181: FMN binding4.01E-02
105GO:0048038: quinone binding4.42E-02
106GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.62E-02
107GO:0015385: sodium:proton antiporter activity4.85E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.04E-07
2GO:0005886: plasma membrane7.50E-06
3GO:0005576: extracellular region4.86E-04
4GO:0031225: anchored component of membrane9.60E-04
5GO:0032588: trans-Golgi network membrane4.68E-03
6GO:0005770: late endosome4.83E-03
7GO:0000148: 1,3-beta-D-glucan synthase complex8.91E-03
8GO:0009707: chloroplast outer membrane1.13E-02
9GO:0000325: plant-type vacuole1.31E-02
10GO:0005783: endoplasmic reticulum1.81E-02
11GO:0043231: intracellular membrane-bounded organelle1.88E-02
12GO:0046658: anchored component of plasma membrane2.12E-02
13GO:0031966: mitochondrial membrane2.34E-02
14GO:0070469: respiratory chain2.50E-02
15GO:0005887: integral component of plasma membrane2.56E-02
16GO:0009504: cell plate4.21E-02
17GO:0005618: cell wall4.25E-02
18GO:0071944: cell periphery4.85E-02
Gene type



Gene DE type