co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G46290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009946: proximal/distal axis specification	0.00E+00
2	GO:0042026: protein refolding	3.91E-09
3	GO:0007005: mitochondrion organization	3.60E-07
4	GO:0006458: 'de novo' protein folding	2.09E-06
5	GO:0006438: valyl-tRNA aminoacylation	1.87E-05
6	GO:0061077: chaperone-mediated protein folding	3.77E-05
7	GO:0019388: galactose catabolic process	4.85E-05
8	GO:0010338: leaf formation	8.61E-05
9	GO:0051085: chaperone mediated protein folding requiring cofactor	1.30E-04
10	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.30E-04
11	GO:0009590: detection of gravity	1.30E-04
12	GO:0043572: plastid fission	1.30E-04
13	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.54E-04
14	GO:0006479: protein methylation	1.78E-04
15	GO:0045088: regulation of innate immune response	1.78E-04
16	GO:0009902: chloroplast relocation	1.78E-04
17	GO:0010236: plastoquinone biosynthetic process	2.30E-04
18	GO:0009094: L-phenylalanine biosynthetic process	3.42E-04
19	GO:0006880: intracellular sequestering of iron ion	4.02E-04
20	GO:0006826: iron ion transport	4.02E-04
21	GO:0008610: lipid biosynthetic process	4.64E-04
22	GO:0005978: glycogen biosynthetic process	4.64E-04
23	GO:0048193: Golgi vesicle transport	5.27E-04
24	GO:0008356: asymmetric cell division	6.61E-04
25	GO:0006457: protein folding	7.27E-04
26	GO:0045036: protein targeting to chloroplast	7.30E-04
27	GO:0019684: photosynthesis, light reaction	8.02E-04
28	GO:0006879: cellular iron ion homeostasis	8.02E-04
29	GO:0048229: gametophyte development	8.02E-04
30	GO:0009767: photosynthetic electron transport chain	9.49E-04
31	GO:0006006: glucose metabolic process	9.49E-04
32	GO:0010020: chloroplast fission	1.02E-03
33	GO:0019253: reductive pentose-phosphate cycle	1.02E-03
34	GO:0010039: response to iron ion	1.10E-03
35	GO:0009944: polarity specification of adaxial/abaxial axis	1.26E-03
36	GO:0006418: tRNA aminoacylation for protein translation	1.35E-03
37	GO:0007017: microtubule-based process	1.35E-03
38	GO:0009658: chloroplast organization	1.39E-03
39	GO:0055072: iron ion homeostasis	2.19E-03
40	GO:0046686: response to cadmium ion	2.19E-03
41	GO:0019252: starch biosynthetic process	2.19E-03
42	GO:0000302: response to reactive oxygen species	2.29E-03
43	GO:0009615: response to virus	2.94E-03
44	GO:0009627: systemic acquired resistance	3.16E-03
45	GO:0018298: protein-chromophore linkage	3.51E-03
46	GO:0008219: cell death	3.51E-03
47	GO:0009813: flavonoid biosynthetic process	3.63E-03
48	GO:0009908: flower development	3.98E-03
49	GO:0009735: response to cytokinin	4.03E-03
50	GO:0009637: response to blue light	4.13E-03
51	GO:0009744: response to sucrose	4.91E-03
52	GO:0009965: leaf morphogenesis	5.32E-03
53	GO:0042742: defense response to bacterium	8.89E-03
54	GO:0009733: response to auxin	9.99E-03
55	GO:0009790: embryo development	1.00E-02
56	GO:0006633: fatty acid biosynthetic process	1.06E-02
57	GO:0007623: circadian rhythm	1.13E-02
58	GO:0009409: response to cold	1.21E-02
59	GO:0009739: response to gibberellin	1.22E-02
60	GO:0006470: protein dephosphorylation	1.24E-02
61	GO:0007049: cell cycle	1.66E-02
62	GO:0006468: protein phosphorylation	1.67E-02
63	GO:0048366: leaf development	1.72E-02
64	GO:0080167: response to karrikin	1.79E-02
65	GO:0015979: photosynthesis	1.97E-02
66	GO:0045892: negative regulation of transcription, DNA-templated	2.06E-02
67	GO:0009751: response to salicylic acid	2.34E-02
68	GO:0006281: DNA repair	2.36E-02
69	GO:0009408: response to heat	2.36E-02
70	GO:0009753: response to jasmonic acid	2.48E-02
71	GO:0008152: metabolic process	2.53E-02
72	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.88E-02
73	GO:0009416: response to light stimulus	3.55E-02

Rank	GO Term	Adjusted P value
1	GO:0008962: phosphatidylglycerophosphatase activity	0.00E+00
2	GO:0044183: protein binding involved in protein folding	5.42E-08
3	GO:0051082: unfolded protein binding	4.58E-07
4	GO:0004832: valine-tRNA ligase activity	1.87E-05
5	GO:0045486: naringenin 3-dioxygenase activity	1.87E-05
6	GO:0016868: intramolecular transferase activity, phosphotransferases	4.85E-05
7	GO:0004614: phosphoglucomutase activity	4.85E-05
8	GO:0003913: DNA photolyase activity	8.61E-05
9	GO:0004751: ribose-5-phosphate isomerase activity	8.61E-05
10	GO:0016597: amino acid binding	1.22E-04
11	GO:0004322: ferroxidase activity	1.30E-04
12	GO:0008276: protein methyltransferase activity	1.30E-04
13	GO:0008199: ferric iron binding	1.30E-04
14	GO:0047769: arogenate dehydratase activity	1.78E-04
15	GO:0004664: prephenate dehydratase activity	1.78E-04
16	GO:0045431: flavonol synthase activity	2.30E-04
17	GO:0080030: methyl indole-3-acetate esterase activity	2.85E-04
18	GO:0005198: structural molecule activity	3.23E-04
19	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.42E-04
20	GO:0009881: photoreceptor activity	4.02E-04
21	GO:0031418: L-ascorbic acid binding	1.26E-03
22	GO:0004812: aminoacyl-tRNA ligase activity	1.80E-03
23	GO:0005524: ATP binding	1.85E-03
24	GO:0004672: protein kinase activity	2.04E-03
25	GO:0043621: protein self-association	5.18E-03
26	GO:0003779: actin binding	7.53E-03
27	GO:0004674: protein serine/threonine kinase activity	9.41E-03
28	GO:0003824: catalytic activity	9.76E-03
29	GO:0005515: protein binding	1.09E-02
30	GO:0042802: identical protein binding	1.34E-02
31	GO:0000287: magnesium ion binding	1.52E-02
32	GO:0016788: hydrolase activity, acting on ester bonds	1.56E-02
33	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.03E-02
34	GO:0042803: protein homodimerization activity	2.10E-02
35	GO:0004722: protein serine/threonine phosphatase activity	2.17E-02
36	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.19E-02
37	GO:0003924: GTPase activity	2.36E-02
38	GO:0016757: transferase activity, transferring glycosyl groups	3.04E-02
39	GO:0016740: transferase activity	4.09E-02
40	GO:0005516: calmodulin binding	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	4.41E-12
2	GO:0010319: stromule	1.76E-06
3	GO:0009941: chloroplast envelope	3.70E-06
4	GO:0009344: nitrite reductase complex [NAD(P)H]	1.87E-05
5	GO:0009507: chloroplast	2.98E-05
6	GO:0000793: condensed chromosome	2.85E-04
7	GO:0022626: cytosolic ribosome	4.99E-04
8	GO:0009535: chloroplast thylakoid membrane	5.76E-04
9	GO:0009579: thylakoid	6.59E-04
10	GO:0030095: chloroplast photosystem II	1.02E-03
11	GO:0048046: apoplast	1.19E-03
12	GO:0009654: photosystem II oxygen evolving complex	1.35E-03
13	GO:0009532: plastid stroma	1.44E-03
14	GO:0019898: extrinsic component of membrane	2.19E-03
15	GO:0005856: cytoskeleton	5.32E-03
16	GO:0009543: chloroplast thylakoid lumen	8.99E-03
17	GO:0005623: cell	9.16E-03
18	GO:0005886: plasma membrane	1.28E-02
19	GO:0005730: nucleolus	1.51E-02
20	GO:0005874: microtubule	1.75E-02
21	GO:0009534: chloroplast thylakoid	4.07E-02
22	GO:0005794: Golgi apparatus	4.76E-02