GO Enrichment Analysis of Co-expressed Genes with
AT5G45940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0006400: tRNA modification | 1.19E-05 |
| 4 | GO:0006810: transport | 4.11E-05 |
| 5 | GO:0051775: response to redox state | 4.45E-05 |
| 6 | GO:0009443: pyridoxal 5'-phosphate salvage | 4.45E-05 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 4.59E-05 |
| 8 | GO:0015979: photosynthesis | 7.48E-05 |
| 9 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.10E-04 |
| 10 | GO:0071492: cellular response to UV-A | 1.89E-04 |
| 11 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.78E-04 |
| 12 | GO:0006107: oxaloacetate metabolic process | 2.78E-04 |
| 13 | GO:0031122: cytoplasmic microtubule organization | 3.73E-04 |
| 14 | GO:0006734: NADH metabolic process | 3.73E-04 |
| 15 | GO:0071486: cellular response to high light intensity | 3.73E-04 |
| 16 | GO:0010027: thylakoid membrane organization | 3.99E-04 |
| 17 | GO:0080110: sporopollenin biosynthetic process | 4.75E-04 |
| 18 | GO:0006461: protein complex assembly | 4.75E-04 |
| 19 | GO:0009658: chloroplast organization | 4.79E-04 |
| 20 | GO:0016554: cytidine to uridine editing | 5.82E-04 |
| 21 | GO:0006561: proline biosynthetic process | 5.82E-04 |
| 22 | GO:0080167: response to karrikin | 6.28E-04 |
| 23 | GO:0010196: nonphotochemical quenching | 8.11E-04 |
| 24 | GO:0009657: plastid organization | 1.06E-03 |
| 25 | GO:0000373: Group II intron splicing | 1.19E-03 |
| 26 | GO:1900865: chloroplast RNA modification | 1.32E-03 |
| 27 | GO:0019538: protein metabolic process | 1.47E-03 |
| 28 | GO:0009688: abscisic acid biosynthetic process | 1.47E-03 |
| 29 | GO:0009641: shade avoidance | 1.47E-03 |
| 30 | GO:0009073: aromatic amino acid family biosynthetic process | 1.61E-03 |
| 31 | GO:0009750: response to fructose | 1.61E-03 |
| 32 | GO:0006108: malate metabolic process | 1.92E-03 |
| 33 | GO:0019762: glucosinolate catabolic process | 2.42E-03 |
| 34 | GO:0006487: protein N-linked glycosylation | 2.60E-03 |
| 35 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.77E-03 |
| 36 | GO:0019722: calcium-mediated signaling | 3.53E-03 |
| 37 | GO:0010584: pollen exine formation | 3.53E-03 |
| 38 | GO:0010182: sugar mediated signaling pathway | 4.14E-03 |
| 39 | GO:0048544: recognition of pollen | 4.35E-03 |
| 40 | GO:0019761: glucosinolate biosynthetic process | 4.99E-03 |
| 41 | GO:0007267: cell-cell signaling | 5.68E-03 |
| 42 | GO:0032259: methylation | 7.07E-03 |
| 43 | GO:0018298: protein-chromophore linkage | 7.39E-03 |
| 44 | GO:0010218: response to far red light | 7.91E-03 |
| 45 | GO:0055114: oxidation-reduction process | 8.10E-03 |
| 46 | GO:0008152: metabolic process | 8.13E-03 |
| 47 | GO:0009637: response to blue light | 8.71E-03 |
| 48 | GO:0046686: response to cadmium ion | 8.87E-03 |
| 49 | GO:0006099: tricarboxylic acid cycle | 8.99E-03 |
| 50 | GO:0010114: response to red light | 1.04E-02 |
| 51 | GO:0009644: response to high light intensity | 1.10E-02 |
| 52 | GO:0055085: transmembrane transport | 1.67E-02 |
| 53 | GO:0010150: leaf senescence | 2.43E-02 |
| 54 | GO:0042742: defense response to bacterium | 2.66E-02 |
| 55 | GO:0016042: lipid catabolic process | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0051738: xanthophyll binding | 0.00E+00 |
| 3 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 5 | GO:0016168: chlorophyll binding | 1.56E-05 |
| 6 | GO:0016491: oxidoreductase activity | 3.10E-05 |
| 7 | GO:0008568: microtubule-severing ATPase activity | 4.45E-05 |
| 8 | GO:0008746: NAD(P)+ transhydrogenase activity | 4.45E-05 |
| 9 | GO:0018708: thiol S-methyltransferase activity | 1.10E-04 |
| 10 | GO:0022891: substrate-specific transmembrane transporter activity | 1.58E-04 |
| 11 | GO:0070402: NADPH binding | 1.89E-04 |
| 12 | GO:0048038: quinone binding | 2.76E-04 |
| 13 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 2.78E-04 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.73E-04 |
| 15 | GO:0016615: malate dehydrogenase activity | 5.82E-04 |
| 16 | GO:0030060: L-malate dehydrogenase activity | 6.94E-04 |
| 17 | GO:0004033: aldo-keto reductase (NADP) activity | 9.32E-04 |
| 18 | GO:0030234: enzyme regulator activity | 1.47E-03 |
| 19 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.92E-03 |
| 20 | GO:0031409: pigment binding | 2.42E-03 |
| 21 | GO:0043424: protein histidine kinase binding | 2.77E-03 |
| 22 | GO:0008168: methyltransferase activity | 3.89E-03 |
| 23 | GO:0050662: coenzyme binding | 4.35E-03 |
| 24 | GO:0051213: dioxygenase activity | 6.15E-03 |
| 25 | GO:0004871: signal transducer activity | 6.27E-03 |
| 26 | GO:0008375: acetylglucosaminyltransferase activity | 6.64E-03 |
| 27 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.71E-03 |
| 28 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.55E-03 |
| 29 | GO:0016740: transferase activity | 1.60E-02 |
| 30 | GO:0019843: rRNA binding | 1.93E-02 |
| 31 | GO:0046910: pectinesterase inhibitor activity | 2.31E-02 |
| 32 | GO:0016788: hydrolase activity, acting on ester bonds | 3.36E-02 |
| 33 | GO:0052689: carboxylic ester hydrolase activity | 4.15E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 2.54E-10 |
| 2 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.65E-10 |
| 3 | GO:0009507: chloroplast | 2.01E-07 |
| 4 | GO:0009523: photosystem II | 6.72E-06 |
| 5 | GO:0009570: chloroplast stroma | 2.72E-04 |
| 6 | GO:0009517: PSII associated light-harvesting complex II | 3.73E-04 |
| 7 | GO:0009579: thylakoid | 4.14E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 4.20E-04 |
| 9 | GO:0009941: chloroplast envelope | 5.79E-04 |
| 10 | GO:0009533: chloroplast stromal thylakoid | 8.11E-04 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.92E-03 |
| 12 | GO:0000312: plastid small ribosomal subunit | 2.09E-03 |
| 13 | GO:0030095: chloroplast photosystem II | 2.09E-03 |
| 14 | GO:0030076: light-harvesting complex | 2.25E-03 |
| 15 | GO:0009522: photosystem I | 4.35E-03 |
| 16 | GO:0030529: intracellular ribonucleoprotein complex | 6.15E-03 |
| 17 | GO:0031977: thylakoid lumen | 9.83E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 1.65E-02 |
| 19 | GO:0010287: plastoglobule | 1.86E-02 |
| 20 | GO:0048046: apoplast | 2.59E-02 |
| 21 | GO:0022627: cytosolic small ribosomal subunit | 2.97E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 2.97E-02 |
| 23 | GO:0031969: chloroplast membrane | 3.87E-02 |