GO Enrichment Analysis of Co-expressed Genes with
AT5G45170
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
5 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
6 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
7 | GO:0009773: photosynthetic electron transport in photosystem I | 6.11E-13 |
8 | GO:0015979: photosynthesis | 5.24E-12 |
9 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.08E-06 |
10 | GO:0010196: nonphotochemical quenching | 5.18E-06 |
11 | GO:0090391: granum assembly | 1.46E-05 |
12 | GO:0006000: fructose metabolic process | 1.46E-05 |
13 | GO:0042335: cuticle development | 1.52E-05 |
14 | GO:0009735: response to cytokinin | 5.08E-05 |
15 | GO:0006094: gluconeogenesis | 5.43E-05 |
16 | GO:0010027: thylakoid membrane organization | 5.72E-05 |
17 | GO:0009658: chloroplast organization | 1.05E-04 |
18 | GO:0006400: tRNA modification | 2.39E-04 |
19 | GO:1902025: nitrate import | 2.99E-04 |
20 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.99E-04 |
21 | GO:1904964: positive regulation of phytol biosynthetic process | 2.99E-04 |
22 | GO:0080051: cutin transport | 2.99E-04 |
23 | GO:0090548: response to nitrate starvation | 2.99E-04 |
24 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.99E-04 |
25 | GO:0032544: plastid translation | 3.71E-04 |
26 | GO:0006002: fructose 6-phosphate metabolic process | 3.71E-04 |
27 | GO:0071482: cellular response to light stimulus | 3.71E-04 |
28 | GO:0010115: regulation of abscisic acid biosynthetic process | 6.55E-04 |
29 | GO:0034755: iron ion transmembrane transport | 6.55E-04 |
30 | GO:0010270: photosystem II oxygen evolving complex assembly | 6.55E-04 |
31 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.55E-04 |
32 | GO:0015908: fatty acid transport | 6.55E-04 |
33 | GO:0043085: positive regulation of catalytic activity | 7.11E-04 |
34 | GO:0009750: response to fructose | 7.11E-04 |
35 | GO:0005983: starch catabolic process | 8.12E-04 |
36 | GO:0018298: protein-chromophore linkage | 8.71E-04 |
37 | GO:0005986: sucrose biosynthetic process | 9.19E-04 |
38 | GO:0010207: photosystem II assembly | 1.03E-03 |
39 | GO:0010581: regulation of starch biosynthetic process | 1.06E-03 |
40 | GO:0045454: cell redox homeostasis | 1.19E-03 |
41 | GO:0006810: transport | 1.20E-03 |
42 | GO:1901332: negative regulation of lateral root development | 1.52E-03 |
43 | GO:0016556: mRNA modification | 1.52E-03 |
44 | GO:2001141: regulation of RNA biosynthetic process | 1.52E-03 |
45 | GO:0006020: inositol metabolic process | 1.52E-03 |
46 | GO:0009152: purine ribonucleotide biosynthetic process | 1.52E-03 |
47 | GO:0046653: tetrahydrofolate metabolic process | 1.52E-03 |
48 | GO:0009800: cinnamic acid biosynthetic process | 1.52E-03 |
49 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.56E-03 |
50 | GO:0006021: inositol biosynthetic process | 2.04E-03 |
51 | GO:0010021: amylopectin biosynthetic process | 2.04E-03 |
52 | GO:0010222: stem vascular tissue pattern formation | 2.04E-03 |
53 | GO:0045727: positive regulation of translation | 2.04E-03 |
54 | GO:0015994: chlorophyll metabolic process | 2.04E-03 |
55 | GO:0008152: metabolic process | 2.05E-03 |
56 | GO:0006564: L-serine biosynthetic process | 2.61E-03 |
57 | GO:0031365: N-terminal protein amino acid modification | 2.61E-03 |
58 | GO:0006461: protein complex assembly | 2.61E-03 |
59 | GO:0080110: sporopollenin biosynthetic process | 2.61E-03 |
60 | GO:0042254: ribosome biogenesis | 2.90E-03 |
61 | GO:0048544: recognition of pollen | 3.02E-03 |
62 | GO:0006559: L-phenylalanine catabolic process | 3.22E-03 |
63 | GO:0046855: inositol phosphate dephosphorylation | 3.22E-03 |
64 | GO:0006561: proline biosynthetic process | 3.22E-03 |
65 | GO:0042549: photosystem II stabilization | 3.22E-03 |
66 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.22E-03 |
67 | GO:0000470: maturation of LSU-rRNA | 3.22E-03 |
68 | GO:0016554: cytidine to uridine editing | 3.22E-03 |
69 | GO:0009913: epidermal cell differentiation | 3.22E-03 |
70 | GO:0006828: manganese ion transport | 3.22E-03 |
71 | GO:0009854: oxidative photosynthetic carbon pathway | 3.87E-03 |
72 | GO:0010019: chloroplast-nucleus signaling pathway | 3.87E-03 |
73 | GO:0009645: response to low light intensity stimulus | 4.57E-03 |
74 | GO:0009395: phospholipid catabolic process | 4.57E-03 |
75 | GO:0009772: photosynthetic electron transport in photosystem II | 4.57E-03 |
76 | GO:0009704: de-etiolation | 5.30E-03 |
77 | GO:0048564: photosystem I assembly | 5.30E-03 |
78 | GO:0008610: lipid biosynthetic process | 5.30E-03 |
79 | GO:0009819: drought recovery | 5.30E-03 |
80 | GO:0042744: hydrogen peroxide catabolic process | 5.77E-03 |
81 | GO:0015995: chlorophyll biosynthetic process | 5.89E-03 |
82 | GO:0006869: lipid transport | 5.92E-03 |
83 | GO:0009657: plastid organization | 6.08E-03 |
84 | GO:0017004: cytochrome complex assembly | 6.08E-03 |
85 | GO:0019430: removal of superoxide radicals | 6.08E-03 |
86 | GO:0034765: regulation of ion transmembrane transport | 6.89E-03 |
87 | GO:0000373: Group II intron splicing | 6.89E-03 |
88 | GO:0006098: pentose-phosphate shunt | 6.89E-03 |
89 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 6.89E-03 |
90 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.74E-03 |
91 | GO:1900865: chloroplast RNA modification | 7.74E-03 |
92 | GO:0010380: regulation of chlorophyll biosynthetic process | 7.74E-03 |
93 | GO:0009637: response to blue light | 8.28E-03 |
94 | GO:0009853: photorespiration | 8.28E-03 |
95 | GO:0009688: abscisic acid biosynthetic process | 8.62E-03 |
96 | GO:0006782: protoporphyrinogen IX biosynthetic process | 8.62E-03 |
97 | GO:0034599: cellular response to oxidative stress | 8.66E-03 |
98 | GO:0009409: response to cold | 9.31E-03 |
99 | GO:0006415: translational termination | 9.55E-03 |
100 | GO:0006879: cellular iron ion homeostasis | 9.55E-03 |
101 | GO:0006352: DNA-templated transcription, initiation | 9.55E-03 |
102 | GO:0000038: very long-chain fatty acid metabolic process | 9.55E-03 |
103 | GO:0006816: calcium ion transport | 9.55E-03 |
104 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.05E-02 |
105 | GO:0006790: sulfur compound metabolic process | 1.05E-02 |
106 | GO:0010114: response to red light | 1.07E-02 |
107 | GO:0010628: positive regulation of gene expression | 1.15E-02 |
108 | GO:0010588: cotyledon vascular tissue pattern formation | 1.15E-02 |
109 | GO:0019253: reductive pentose-phosphate cycle | 1.25E-02 |
110 | GO:0006855: drug transmembrane transport | 1.25E-02 |
111 | GO:0010143: cutin biosynthetic process | 1.25E-02 |
112 | GO:0010020: chloroplast fission | 1.25E-02 |
113 | GO:0005985: sucrose metabolic process | 1.36E-02 |
114 | GO:0046854: phosphatidylinositol phosphorylation | 1.36E-02 |
115 | GO:0006364: rRNA processing | 1.45E-02 |
116 | GO:0019762: glucosinolate catabolic process | 1.47E-02 |
117 | GO:0000027: ribosomal large subunit assembly | 1.58E-02 |
118 | GO:0007017: microtubule-based process | 1.69E-02 |
119 | GO:0009695: jasmonic acid biosynthetic process | 1.69E-02 |
120 | GO:0019953: sexual reproduction | 1.69E-02 |
121 | GO:0016575: histone deacetylation | 1.69E-02 |
122 | GO:0061077: chaperone-mediated protein folding | 1.81E-02 |
123 | GO:0009269: response to desiccation | 1.81E-02 |
124 | GO:0031408: oxylipin biosynthetic process | 1.81E-02 |
125 | GO:0030245: cellulose catabolic process | 1.93E-02 |
126 | GO:0016226: iron-sulfur cluster assembly | 1.93E-02 |
127 | GO:0010584: pollen exine formation | 2.18E-02 |
128 | GO:0009737: response to abscisic acid | 2.22E-02 |
129 | GO:0042391: regulation of membrane potential | 2.44E-02 |
130 | GO:0000413: protein peptidyl-prolyl isomerization | 2.44E-02 |
131 | GO:0006662: glycerol ether metabolic process | 2.57E-02 |
132 | GO:0010182: sugar mediated signaling pathway | 2.57E-02 |
133 | GO:0032259: methylation | 2.62E-02 |
134 | GO:0016042: lipid catabolic process | 2.66E-02 |
135 | GO:0015986: ATP synthesis coupled proton transport | 2.71E-02 |
136 | GO:0019252: starch biosynthetic process | 2.85E-02 |
137 | GO:0000302: response to reactive oxygen species | 2.99E-02 |
138 | GO:0019761: glucosinolate biosynthetic process | 3.13E-02 |
139 | GO:0071805: potassium ion transmembrane transport | 3.58E-02 |
140 | GO:0009451: RNA modification | 3.64E-02 |
141 | GO:0001666: response to hypoxia | 3.88E-02 |
142 | GO:0042128: nitrate assimilation | 4.20E-02 |
143 | GO:0016311: dephosphorylation | 4.52E-02 |
144 | GO:0042742: defense response to bacterium | 4.73E-02 |
145 | GO:0010311: lateral root formation | 4.85E-02 |
146 | GO:0000160: phosphorelay signal transduction system | 4.85E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
3 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
4 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
6 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
7 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
8 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
9 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
10 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
11 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.51E-08 |
12 | GO:0005528: FK506 binding | 7.97E-08 |
13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.08E-06 |
14 | GO:0019843: rRNA binding | 1.41E-04 |
15 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.83E-04 |
16 | GO:0051920: peroxiredoxin activity | 1.83E-04 |
17 | GO:0004321: fatty-acyl-CoA synthase activity | 2.99E-04 |
18 | GO:0019203: carbohydrate phosphatase activity | 2.99E-04 |
19 | GO:0005080: protein kinase C binding | 2.99E-04 |
20 | GO:0015245: fatty acid transporter activity | 2.99E-04 |
21 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.99E-04 |
22 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 2.99E-04 |
23 | GO:0050308: sugar-phosphatase activity | 2.99E-04 |
24 | GO:0016209: antioxidant activity | 3.02E-04 |
25 | GO:0008047: enzyme activator activity | 6.16E-04 |
26 | GO:0047746: chlorophyllase activity | 6.55E-04 |
27 | GO:0004617: phosphoglycerate dehydrogenase activity | 6.55E-04 |
28 | GO:0052832: inositol monophosphate 3-phosphatase activity | 6.55E-04 |
29 | GO:0033201: alpha-1,4-glucan synthase activity | 6.55E-04 |
30 | GO:0008934: inositol monophosphate 1-phosphatase activity | 6.55E-04 |
31 | GO:0052833: inositol monophosphate 4-phosphatase activity | 6.55E-04 |
32 | GO:0016630: protochlorophyllide reductase activity | 6.55E-04 |
33 | GO:0016168: chlorophyll binding | 6.68E-04 |
34 | GO:0046872: metal ion binding | 6.82E-04 |
35 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.06E-03 |
36 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.06E-03 |
37 | GO:0004373: glycogen (starch) synthase activity | 1.06E-03 |
38 | GO:0045548: phenylalanine ammonia-lyase activity | 1.06E-03 |
39 | GO:0031409: pigment binding | 1.28E-03 |
40 | GO:0005509: calcium ion binding | 1.33E-03 |
41 | GO:0048487: beta-tubulin binding | 1.52E-03 |
42 | GO:0016149: translation release factor activity, codon specific | 1.52E-03 |
43 | GO:0009055: electron carrier activity | 1.95E-03 |
44 | GO:0009011: starch synthase activity | 2.04E-03 |
45 | GO:0043495: protein anchor | 2.04E-03 |
46 | GO:0042277: peptide binding | 2.04E-03 |
47 | GO:0004659: prenyltransferase activity | 2.04E-03 |
48 | GO:0001053: plastid sigma factor activity | 2.04E-03 |
49 | GO:0005319: lipid transporter activity | 2.04E-03 |
50 | GO:0004045: aminoacyl-tRNA hydrolase activity | 2.04E-03 |
51 | GO:0016987: sigma factor activity | 2.04E-03 |
52 | GO:1990137: plant seed peroxidase activity | 2.04E-03 |
53 | GO:0003959: NADPH dehydrogenase activity | 2.61E-03 |
54 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.61E-03 |
55 | GO:0004601: peroxidase activity | 2.82E-03 |
56 | GO:0016788: hydrolase activity, acting on ester bonds | 2.90E-03 |
57 | GO:0050662: coenzyme binding | 3.02E-03 |
58 | GO:0004791: thioredoxin-disulfide reductase activity | 3.02E-03 |
59 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.22E-03 |
60 | GO:0016688: L-ascorbate peroxidase activity | 3.22E-03 |
61 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.22E-03 |
62 | GO:2001070: starch binding | 3.22E-03 |
63 | GO:0004332: fructose-bisphosphate aldolase activity | 3.22E-03 |
64 | GO:0004130: cytochrome-c peroxidase activity | 3.22E-03 |
65 | GO:0016746: transferase activity, transferring acyl groups | 3.82E-03 |
66 | GO:0005242: inward rectifier potassium channel activity | 3.87E-03 |
67 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.87E-03 |
68 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.94E-03 |
69 | GO:0019899: enzyme binding | 4.57E-03 |
70 | GO:0008235: metalloexopeptidase activity | 4.57E-03 |
71 | GO:0016597: amino acid binding | 4.72E-03 |
72 | GO:0003723: RNA binding | 5.21E-03 |
73 | GO:0004033: aldo-keto reductase (NADP) activity | 5.30E-03 |
74 | GO:0043022: ribosome binding | 5.30E-03 |
75 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 6.08E-03 |
76 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 6.89E-03 |
77 | GO:0003747: translation release factor activity | 6.89E-03 |
78 | GO:0016207: 4-coumarate-CoA ligase activity | 6.89E-03 |
79 | GO:0005384: manganese ion transmembrane transporter activity | 7.74E-03 |
80 | GO:0005381: iron ion transmembrane transporter activity | 7.74E-03 |
81 | GO:0004519: endonuclease activity | 8.04E-03 |
82 | GO:0030234: enzyme regulator activity | 8.62E-03 |
83 | GO:0004177: aminopeptidase activity | 9.55E-03 |
84 | GO:0015386: potassium:proton antiporter activity | 9.55E-03 |
85 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.00E-02 |
86 | GO:0042802: identical protein binding | 1.00E-02 |
87 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.15E-02 |
88 | GO:0015095: magnesium ion transmembrane transporter activity | 1.15E-02 |
89 | GO:0004565: beta-galactosidase activity | 1.15E-02 |
90 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.16E-02 |
91 | GO:0008168: methyltransferase activity | 1.23E-02 |
92 | GO:0008266: poly(U) RNA binding | 1.25E-02 |
93 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.47E-02 |
94 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.47E-02 |
95 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.47E-02 |
96 | GO:0051536: iron-sulfur cluster binding | 1.58E-02 |
97 | GO:0004407: histone deacetylase activity | 1.58E-02 |
98 | GO:0015079: potassium ion transmembrane transporter activity | 1.69E-02 |
99 | GO:0003824: catalytic activity | 1.89E-02 |
100 | GO:0052689: carboxylic ester hydrolase activity | 1.92E-02 |
101 | GO:0008810: cellulase activity | 2.05E-02 |
102 | GO:0022891: substrate-specific transmembrane transporter activity | 2.05E-02 |
103 | GO:0047134: protein-disulfide reductase activity | 2.31E-02 |
104 | GO:0005249: voltage-gated potassium channel activity | 2.44E-02 |
105 | GO:0030551: cyclic nucleotide binding | 2.44E-02 |
106 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.57E-02 |
107 | GO:0016491: oxidoreductase activity | 2.57E-02 |
108 | GO:0030246: carbohydrate binding | 2.62E-02 |
109 | GO:0004518: nuclease activity | 3.13E-02 |
110 | GO:0000156: phosphorelay response regulator activity | 3.28E-02 |
111 | GO:0016791: phosphatase activity | 3.42E-02 |
112 | GO:0008237: metallopeptidase activity | 3.58E-02 |
113 | GO:0005200: structural constituent of cytoskeleton | 3.58E-02 |
114 | GO:0051213: dioxygenase activity | 3.88E-02 |
115 | GO:0008289: lipid binding | 4.15E-02 |
116 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 4.20E-02 |
117 | GO:0004721: phosphoprotein phosphatase activity | 4.36E-02 |
118 | GO:0004683: calmodulin-dependent protein kinase activity | 4.36E-02 |
119 | GO:0015238: drug transmembrane transporter activity | 4.85E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
2 | GO:0009575: chromoplast stroma | 0.00E+00 |
3 | GO:0009507: chloroplast | 4.24E-53 |
4 | GO:0009535: chloroplast thylakoid membrane | 1.15E-34 |
5 | GO:0009534: chloroplast thylakoid | 4.15E-20 |
6 | GO:0009570: chloroplast stroma | 6.17E-20 |
7 | GO:0009543: chloroplast thylakoid lumen | 2.58E-18 |
8 | GO:0009579: thylakoid | 1.51E-17 |
9 | GO:0009941: chloroplast envelope | 7.51E-15 |
10 | GO:0031977: thylakoid lumen | 6.84E-13 |
11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.25E-07 |
12 | GO:0009654: photosystem II oxygen evolving complex | 4.92E-06 |
13 | GO:0019898: extrinsic component of membrane | 2.40E-05 |
14 | GO:0031969: chloroplast membrane | 2.44E-05 |
15 | GO:0030095: chloroplast photosystem II | 6.59E-05 |
16 | GO:0010287: plastoglobule | 1.26E-04 |
17 | GO:0042651: thylakoid membrane | 1.27E-04 |
18 | GO:0009533: chloroplast stromal thylakoid | 2.39E-04 |
19 | GO:0009782: photosystem I antenna complex | 2.99E-04 |
20 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 2.99E-04 |
21 | GO:0009523: photosystem II | 3.54E-04 |
22 | GO:0046658: anchored component of plasma membrane | 4.51E-04 |
23 | GO:0010319: stromule | 5.37E-04 |
24 | GO:0009897: external side of plasma membrane | 1.06E-03 |
25 | GO:0030076: light-harvesting complex | 1.15E-03 |
26 | GO:0015630: microtubule cytoskeleton | 1.52E-03 |
27 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 3.22E-03 |
28 | GO:0030529: intracellular ribonucleoprotein complex | 5.00E-03 |
29 | GO:0009501: amyloplast | 5.30E-03 |
30 | GO:0005811: lipid particle | 6.08E-03 |
31 | GO:0016020: membrane | 6.66E-03 |
32 | GO:0043231: intracellular membrane-bounded organelle | 8.21E-03 |
33 | GO:0048046: apoplast | 1.02E-02 |
34 | GO:0005874: microtubule | 1.62E-02 |
35 | GO:0005840: ribosome | 1.75E-02 |
36 | GO:0009532: plastid stroma | 1.81E-02 |
37 | GO:0015935: small ribosomal subunit | 1.81E-02 |
38 | GO:0009706: chloroplast inner membrane | 2.06E-02 |
39 | GO:0009522: photosystem I | 2.71E-02 |
40 | GO:0031225: anchored component of membrane | 3.25E-02 |
41 | GO:0009707: chloroplast outer membrane | 4.69E-02 |