co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G44790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
2	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
3	GO:0080056: petal vascular tissue pattern formation	0.00E+00
4	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
5	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
6	GO:0051788: response to misfolded protein	7.07E-07
7	GO:0090630: activation of GTPase activity	2.67E-06
8	GO:0045087: innate immune response	1.16E-05
9	GO:0000380: alternative mRNA splicing, via spliceosome	1.95E-05
10	GO:0043248: proteasome assembly	2.95E-05
11	GO:0031338: regulation of vesicle fusion	1.18E-04
12	GO:0048455: stamen formation	1.18E-04
13	GO:0035266: meristem growth	1.18E-04
14	GO:0007292: female gamete generation	1.18E-04
15	GO:0015760: glucose-6-phosphate transport	1.18E-04
16	GO:1990641: response to iron ion starvation	1.18E-04
17	GO:1902265: abscisic acid homeostasis	1.18E-04
18	GO:0034243: regulation of transcription elongation from RNA polymerase II promoter	2.73E-04
19	GO:0009257: 10-formyltetrahydrofolate biosynthetic process	2.73E-04
20	GO:0050684: regulation of mRNA processing	2.73E-04
21	GO:0007584: response to nutrient	2.73E-04
22	GO:0006101: citrate metabolic process	2.73E-04
23	GO:0006970: response to osmotic stress	4.23E-04
24	GO:0032784: regulation of DNA-templated transcription, elongation	4.52E-04
25	GO:0035436: triose phosphate transmembrane transport	4.52E-04
26	GO:0060968: regulation of gene silencing	4.52E-04
27	GO:0032786: positive regulation of DNA-templated transcription, elongation	4.52E-04
28	GO:0015714: phosphoenolpyruvate transport	4.52E-04
29	GO:0006954: inflammatory response	4.52E-04
30	GO:0051601: exocyst localization	6.47E-04
31	GO:0019048: modulation by virus of host morphology or physiology	6.47E-04
32	GO:0009113: purine nucleobase biosynthetic process	6.47E-04
33	GO:0051028: mRNA transport	6.76E-04
34	GO:0010501: RNA secondary structure unwinding	7.29E-04
35	GO:0006646: phosphatidylethanolamine biosynthetic process	8.60E-04
36	GO:0009687: abscisic acid metabolic process	8.60E-04
37	GO:0015743: malate transport	8.60E-04
38	GO:0033320: UDP-D-xylose biosynthetic process	8.60E-04
39	GO:0010107: potassium ion import	8.60E-04
40	GO:0015713: phosphoglycerate transport	8.60E-04
41	GO:0043097: pyrimidine nucleoside salvage	1.08E-03
42	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.33E-03
43	GO:0048827: phyllome development	1.33E-03
44	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.33E-03
45	GO:0048232: male gamete generation	1.33E-03
46	GO:0042732: D-xylose metabolic process	1.33E-03
47	GO:0006206: pyrimidine nucleobase metabolic process	1.33E-03
48	GO:0048280: vesicle fusion with Golgi apparatus	1.59E-03
49	GO:0034389: lipid particle organization	1.59E-03
50	GO:0033962: cytoplasmic mRNA processing body assembly	1.59E-03
51	GO:0048573: photoperiodism, flowering	1.60E-03
52	GO:0048528: post-embryonic root development	1.87E-03
53	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.87E-03
54	GO:0009396: folic acid-containing compound biosynthetic process	1.87E-03
55	GO:0006499: N-terminal protein myristoylation	1.94E-03
56	GO:0009735: response to cytokinin	1.96E-03
57	GO:0010043: response to zinc ion	2.04E-03
58	GO:0006605: protein targeting	2.16E-03
59	GO:0009415: response to water	2.16E-03
60	GO:0010078: maintenance of root meristem identity	2.16E-03
61	GO:0032508: DNA duplex unwinding	2.16E-03
62	GO:0006102: isocitrate metabolic process	2.16E-03
63	GO:0009819: drought recovery	2.16E-03
64	GO:0006875: cellular metal ion homeostasis	2.16E-03
65	GO:0060321: acceptance of pollen	2.46E-03
66	GO:0006468: protein phosphorylation	2.53E-03
67	GO:0048366: leaf development	2.94E-03
68	GO:0008202: steroid metabolic process	3.12E-03
69	GO:0035999: tetrahydrofolate interconversion	3.12E-03
70	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.12E-03
71	GO:0048829: root cap development	3.46E-03
72	GO:0006298: mismatch repair	3.46E-03
73	GO:0006896: Golgi to vacuole transport	3.46E-03
74	GO:0006325: chromatin organization	3.46E-03
75	GO:0010015: root morphogenesis	3.82E-03
76	GO:0009651: response to salt stress	4.00E-03
77	GO:0010152: pollen maturation	4.19E-03
78	GO:0010588: cotyledon vascular tissue pattern formation	4.57E-03
79	GO:2000012: regulation of auxin polar transport	4.57E-03
80	GO:0010102: lateral root morphogenesis	4.57E-03
81	GO:0048367: shoot system development	4.68E-03
82	GO:0009933: meristem structural organization	4.97E-03
83	GO:0090351: seedling development	5.37E-03
84	GO:0010030: positive regulation of seed germination	5.37E-03
85	GO:0007033: vacuole organization	5.37E-03
86	GO:0009225: nucleotide-sugar metabolic process	5.37E-03
87	GO:0009624: response to nematode	5.46E-03
88	GO:0000162: tryptophan biosynthetic process	5.79E-03
89	GO:0009737: response to abscisic acid	5.91E-03
90	GO:0006406: mRNA export from nucleus	6.22E-03
91	GO:0006289: nucleotide-excision repair	6.22E-03
92	GO:0009695: jasmonic acid biosynthetic process	6.66E-03
93	GO:0009269: response to desiccation	7.11E-03
94	GO:0030433: ubiquitin-dependent ERAD pathway	7.57E-03
95	GO:0035428: hexose transmembrane transport	7.57E-03
96	GO:0010227: floral organ abscission	8.05E-03
97	GO:0071215: cellular response to abscisic acid stimulus	8.05E-03
98	GO:0042147: retrograde transport, endosome to Golgi	9.02E-03
99	GO:0080022: primary root development	9.53E-03
100	GO:0000413: protein peptidyl-prolyl isomerization	9.53E-03
101	GO:0010051: xylem and phloem pattern formation	9.53E-03
102	GO:0010118: stomatal movement	9.53E-03
103	GO:0042631: cellular response to water deprivation	9.53E-03
104	GO:0042391: regulation of membrane potential	9.53E-03
105	GO:0046323: glucose import	1.00E-02
106	GO:0010305: leaf vascular tissue pattern formation	1.00E-02
107	GO:0009409: response to cold	1.04E-02
108	GO:0048544: recognition of pollen	1.06E-02
109	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.06E-02
110	GO:0009555: pollen development	1.07E-02
111	GO:0008654: phospholipid biosynthetic process	1.11E-02
112	GO:0006623: protein targeting to vacuole	1.11E-02
113	GO:0010183: pollen tube guidance	1.11E-02
114	GO:0006891: intra-Golgi vesicle-mediated transport	1.16E-02
115	GO:0006635: fatty acid beta-oxidation	1.16E-02
116	GO:0071554: cell wall organization or biogenesis	1.16E-02
117	GO:0006810: transport	1.17E-02
118	GO:0009630: gravitropism	1.22E-02
119	GO:0016032: viral process	1.22E-02
120	GO:0030163: protein catabolic process	1.28E-02
121	GO:0071805: potassium ion transmembrane transport	1.39E-02
122	GO:0010029: regulation of seed germination	1.57E-02
123	GO:0006974: cellular response to DNA damage stimulus	1.63E-02
124	GO:0006888: ER to Golgi vesicle-mediated transport	1.70E-02
125	GO:0016049: cell growth	1.76E-02
126	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.88E-02
127	GO:0048767: root hair elongation	1.89E-02
128	GO:0010311: lateral root formation	1.89E-02
129	GO:0009631: cold acclimation	2.02E-02
130	GO:0010119: regulation of stomatal movement	2.02E-02
131	GO:0016051: carbohydrate biosynthetic process	2.16E-02
132	GO:0006099: tricarboxylic acid cycle	2.23E-02
133	GO:0006886: intracellular protein transport	2.24E-02
134	GO:0006869: lipid transport	2.39E-02
135	GO:0006887: exocytosis	2.44E-02
136	GO:0006897: endocytosis	2.44E-02
137	GO:0009744: response to sucrose	2.59E-02
138	GO:0051707: response to other organism	2.59E-02
139	GO:0009408: response to heat	2.68E-02
140	GO:0006397: mRNA processing	2.80E-02
141	GO:0048364: root development	2.80E-02
142	GO:0009965: leaf morphogenesis	2.81E-02
143	GO:0031347: regulation of defense response	2.96E-02
144	GO:0009846: pollen germination	3.04E-02
145	GO:0006364: rRNA processing	3.20E-02
146	GO:0006813: potassium ion transport	3.20E-02
147	GO:0006417: regulation of translation	3.44E-02
148	GO:0009626: plant-type hypersensitive response	3.77E-02
149	GO:0009553: embryo sac development	4.02E-02
150	GO:0009742: brassinosteroid mediated signaling pathway	4.28E-02
151	GO:0046686: response to cadmium ion	4.49E-02
152	GO:0009611: response to wounding	4.84E-02
153	GO:0035556: intracellular signal transduction	4.99E-02
154	GO:0009058: biosynthetic process	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
2	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
3	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
4	GO:0001653: peptide receptor activity	6.29E-06
5	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	1.18E-04
6	GO:0035671: enone reductase activity	1.18E-04
7	GO:0000824: inositol tetrakisphosphate 3-kinase activity	1.18E-04
8	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.18E-04
9	GO:0047326: inositol tetrakisphosphate 5-kinase activity	1.18E-04
10	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	1.18E-04
11	GO:0003729: mRNA binding	1.85E-04
12	GO:0004329: formate-tetrahydrofolate ligase activity	2.73E-04
13	GO:0004609: phosphatidylserine decarboxylase activity	2.73E-04
14	GO:0003994: aconitate hydratase activity	2.73E-04
15	GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity	2.73E-04
16	GO:0015152: glucose-6-phosphate transmembrane transporter activity	2.73E-04
17	GO:0004477: methenyltetrahydrofolate cyclohydrolase activity	2.73E-04
18	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.73E-04
19	GO:0004383: guanylate cyclase activity	4.52E-04
20	GO:0071917: triose-phosphate transmembrane transporter activity	4.52E-04
21	GO:0005047: signal recognition particle binding	4.52E-04
22	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.47E-04
23	GO:0004300: enoyl-CoA hydratase activity	6.47E-04
24	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	6.47E-04
25	GO:0048027: mRNA 5'-UTR binding	6.47E-04
26	GO:0005253: anion channel activity	8.60E-04
27	GO:0015120: phosphoglycerate transmembrane transporter activity	8.60E-04
28	GO:0004834: tryptophan synthase activity	8.60E-04
29	GO:0000993: RNA polymerase II core binding	8.60E-04
30	GO:0010294: abscisic acid glucosyltransferase activity	1.08E-03
31	GO:0017137: Rab GTPase binding	1.08E-03
32	GO:0036402: proteasome-activating ATPase activity	1.33E-03
33	GO:0048040: UDP-glucuronate decarboxylase activity	1.33E-03
34	GO:0031593: polyubiquitin binding	1.33E-03
35	GO:0005509: calcium ion binding	1.36E-03
36	GO:0070403: NAD+ binding	1.59E-03
37	GO:0070300: phosphatidic acid binding	1.59E-03
38	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.59E-03
39	GO:0004849: uridine kinase activity	1.59E-03
40	GO:0005096: GTPase activator activity	1.85E-03
41	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.86E-03
42	GO:0015140: malate transmembrane transporter activity	1.87E-03
43	GO:0005337: nucleoside transmembrane transporter activity	2.16E-03
44	GO:0003697: single-stranded DNA binding	2.23E-03
45	GO:0000149: SNARE binding	2.43E-03
46	GO:0005267: potassium channel activity	2.46E-03
47	GO:0005524: ATP binding	2.51E-03
48	GO:0047617: acyl-CoA hydrolase activity	3.12E-03
49	GO:0015020: glucuronosyltransferase activity	3.46E-03
50	GO:0004713: protein tyrosine kinase activity	3.46E-03
51	GO:0005315: inorganic phosphate transmembrane transporter activity	4.57E-03
52	GO:0030552: cAMP binding	5.37E-03
53	GO:0030553: cGMP binding	5.37E-03
54	GO:0017025: TBP-class protein binding	5.37E-03
55	GO:0016301: kinase activity	6.21E-03
56	GO:0015079: potassium ion transmembrane transporter activity	6.66E-03
57	GO:0043424: protein histidine kinase binding	6.66E-03
58	GO:0005216: ion channel activity	6.66E-03
59	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.11E-03
60	GO:0003727: single-stranded RNA binding	8.53E-03
61	GO:0005249: voltage-gated potassium channel activity	9.53E-03
62	GO:0030551: cyclic nucleotide binding	9.53E-03
63	GO:0005355: glucose transmembrane transporter activity	1.06E-02
64	GO:0004872: receptor activity	1.11E-02
65	GO:0003684: damaged DNA binding	1.33E-02
66	GO:0046982: protein heterodimerization activity	1.44E-02
67	GO:0016413: O-acetyltransferase activity	1.45E-02
68	GO:0008375: acetylglucosaminyltransferase activity	1.63E-02
69	GO:0030247: polysaccharide binding	1.70E-02
70	GO:0004004: ATP-dependent RNA helicase activity	1.70E-02
71	GO:0003746: translation elongation factor activity	2.16E-02
72	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.30E-02
73	GO:0051539: 4 iron, 4 sulfur cluster binding	2.37E-02
74	GO:0004722: protein serine/threonine phosphatase activity	2.39E-02
75	GO:0004674: protein serine/threonine kinase activity	2.50E-02
76	GO:0005484: SNAP receptor activity	2.59E-02
77	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.88E-02
78	GO:0005215: transporter activity	2.94E-02
79	GO:0003690: double-stranded DNA binding	3.28E-02
80	GO:0015171: amino acid transmembrane transporter activity	3.44E-02
81	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.85E-02
82	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.85E-02
83	GO:0016874: ligase activity	3.94E-02
84	GO:0016887: ATPase activity	4.14E-02
85	GO:0004672: protein kinase activity	4.18E-02
86	GO:0008026: ATP-dependent helicase activity	4.28E-02

Rank	GO Term	Adjusted P value
1	GO:0071942: XPC complex	0.00E+00
2	GO:0000111: nucleotide-excision repair factor 2 complex	0.00E+00
3	GO:0005785: signal recognition particle receptor complex	0.00E+00
4	GO:0005886: plasma membrane	8.09E-05
5	GO:0005777: peroxisome	1.01E-04
6	GO:0032044: DSIF complex	1.18E-04
7	GO:0008540: proteasome regulatory particle, base subcomplex	1.37E-04
8	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	2.73E-04
9	GO:0005783: endoplasmic reticulum	6.57E-04
10	GO:0016021: integral component of membrane	1.15E-03
11	GO:0030140: trans-Golgi network transport vesicle	1.33E-03
12	GO:0005829: cytosol	1.54E-03
13	GO:0031597: cytosolic proteasome complex	1.59E-03
14	GO:0016363: nuclear matrix	1.59E-03
15	GO:0031595: nuclear proteasome complex	1.87E-03
16	GO:0000786: nucleosome	2.13E-03
17	GO:0012507: ER to Golgi transport vesicle membrane	2.16E-03
18	GO:0030131: clathrin adaptor complex	2.16E-03
19	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.46E-03
20	GO:0010494: cytoplasmic stress granule	2.78E-03
21	GO:0030125: clathrin vesicle coat	3.46E-03
22	GO:0000502: proteasome complex	3.84E-03
23	GO:0005905: clathrin-coated pit	7.11E-03
24	GO:0005794: Golgi apparatus	7.31E-03
25	GO:0009705: plant-type vacuole membrane	9.43E-03
26	GO:0005770: late endosome	1.00E-02
27	GO:0000145: exocyst	1.22E-02
28	GO:0005774: vacuolar membrane	1.37E-02
29	GO:0000932: P-body	1.51E-02
30	GO:0015934: large ribosomal subunit	2.02E-02
31	GO:0000325: plant-type vacuole	2.02E-02
32	GO:0009506: plasmodesma	2.26E-02
33	GO:0031902: late endosome membrane	2.44E-02
34	GO:0031201: SNARE complex	2.44E-02
35	GO:0090406: pollen tube	2.59E-02
36	GO:0005856: cytoskeleton	2.81E-02
37	GO:0005773: vacuole	2.83E-02
38	GO:0043231: intracellular membrane-bounded organelle	2.96E-02
39	GO:0010008: endosome membrane	3.68E-02
40	GO:0012505: endomembrane system	4.02E-02
41	GO:0048046: apoplast	4.46E-02
42	GO:0005654: nucleoplasm	4.73E-02
43	GO:0005730: nucleolus	4.96E-02
44	GO:0009524: phragmoplast	5.00E-02