GO Enrichment Analysis of Co-expressed Genes with
AT5G44410
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0015979: photosynthesis | 1.77E-08 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 1.19E-07 |
| 5 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.64E-05 |
| 6 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.64E-05 |
| 7 | GO:1904964: positive regulation of phytol biosynthetic process | 2.64E-05 |
| 8 | GO:0019253: reductive pentose-phosphate cycle | 3.34E-05 |
| 9 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 6.72E-05 |
| 10 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 6.72E-05 |
| 11 | GO:0044208: 'de novo' AMP biosynthetic process | 6.72E-05 |
| 12 | GO:0071492: cellular response to UV-A | 1.18E-04 |
| 13 | GO:0090506: axillary shoot meristem initiation | 1.18E-04 |
| 14 | GO:0006000: fructose metabolic process | 1.18E-04 |
| 15 | GO:0019760: glucosinolate metabolic process | 1.69E-04 |
| 16 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.76E-04 |
| 17 | GO:2000122: negative regulation of stomatal complex development | 2.39E-04 |
| 18 | GO:0006546: glycine catabolic process | 2.39E-04 |
| 19 | GO:0010037: response to carbon dioxide | 2.39E-04 |
| 20 | GO:0015976: carbon utilization | 2.39E-04 |
| 21 | GO:0071486: cellular response to high light intensity | 2.39E-04 |
| 22 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.39E-04 |
| 23 | GO:0006461: protein complex assembly | 3.07E-04 |
| 24 | GO:0006656: phosphatidylcholine biosynthetic process | 3.07E-04 |
| 25 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.78E-04 |
| 26 | GO:0016554: cytidine to uridine editing | 3.78E-04 |
| 27 | GO:0009955: adaxial/abaxial pattern specification | 4.53E-04 |
| 28 | GO:0030643: cellular phosphate ion homeostasis | 4.53E-04 |
| 29 | GO:0010067: procambium histogenesis | 4.53E-04 |
| 30 | GO:1901259: chloroplast rRNA processing | 4.53E-04 |
| 31 | GO:0009644: response to high light intensity | 4.74E-04 |
| 32 | GO:0009409: response to cold | 5.23E-04 |
| 33 | GO:0006810: transport | 5.92E-04 |
| 34 | GO:0032544: plastid translation | 6.94E-04 |
| 35 | GO:0006002: fructose 6-phosphate metabolic process | 6.94E-04 |
| 36 | GO:0009657: plastid organization | 6.94E-04 |
| 37 | GO:0010206: photosystem II repair | 7.80E-04 |
| 38 | GO:0010112: regulation of systemic acquired resistance | 7.80E-04 |
| 39 | GO:0006189: 'de novo' IMP biosynthetic process | 7.80E-04 |
| 40 | GO:1900865: chloroplast RNA modification | 8.68E-04 |
| 41 | GO:0009641: shade avoidance | 9.59E-04 |
| 42 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.05E-03 |
| 43 | GO:0006094: gluconeogenesis | 1.25E-03 |
| 44 | GO:0005986: sucrose biosynthetic process | 1.25E-03 |
| 45 | GO:0010223: secondary shoot formation | 1.35E-03 |
| 46 | GO:0005985: sucrose metabolic process | 1.45E-03 |
| 47 | GO:0006071: glycerol metabolic process | 1.56E-03 |
| 48 | GO:0080092: regulation of pollen tube growth | 2.02E-03 |
| 49 | GO:0001944: vasculature development | 2.14E-03 |
| 50 | GO:0010089: xylem development | 2.26E-03 |
| 51 | GO:0010087: phloem or xylem histogenesis | 2.52E-03 |
| 52 | GO:0007264: small GTPase mediated signal transduction | 3.19E-03 |
| 53 | GO:0046686: response to cadmium ion | 3.79E-03 |
| 54 | GO:0018298: protein-chromophore linkage | 4.69E-03 |
| 55 | GO:0009817: defense response to fungus, incompatible interaction | 4.69E-03 |
| 56 | GO:0010119: regulation of stomatal movement | 5.18E-03 |
| 57 | GO:0009735: response to cytokinin | 6.16E-03 |
| 58 | GO:0042542: response to hydrogen peroxide | 6.39E-03 |
| 59 | GO:0009738: abscisic acid-activated signaling pathway | 6.52E-03 |
| 60 | GO:0055085: transmembrane transport | 8.56E-03 |
| 61 | GO:0006508: proteolysis | 8.96E-03 |
| 62 | GO:0006096: glycolytic process | 9.08E-03 |
| 63 | GO:0009658: chloroplast organization | 2.07E-02 |
| 64 | GO:0009860: pollen tube growth | 2.19E-02 |
| 65 | GO:0032259: methylation | 3.10E-02 |
| 66 | GO:0006629: lipid metabolic process | 3.19E-02 |
| 67 | GO:0009408: response to heat | 3.19E-02 |
| 68 | GO:0008152: metabolic process | 3.42E-02 |
| 69 | GO:0009873: ethylene-activated signaling pathway | 3.83E-02 |
| 70 | GO:0009611: response to wounding | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
| 2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0004018: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity | 2.64E-05 |
| 5 | GO:0070626: (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity | 2.64E-05 |
| 6 | GO:0004560: alpha-L-fucosidase activity | 2.64E-05 |
| 7 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 6.72E-05 |
| 8 | GO:0004618: phosphoglycerate kinase activity | 6.72E-05 |
| 9 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 6.72E-05 |
| 10 | GO:0022891: substrate-specific transmembrane transporter activity | 7.63E-05 |
| 11 | GO:0070402: NADPH binding | 1.18E-04 |
| 12 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.76E-04 |
| 13 | GO:0016168: chlorophyll binding | 2.17E-04 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.39E-04 |
| 15 | GO:0043495: protein anchor | 2.39E-04 |
| 16 | GO:0008200: ion channel inhibitor activity | 3.78E-04 |
| 17 | GO:0019899: enzyme binding | 5.30E-04 |
| 18 | GO:0004033: aldo-keto reductase (NADP) activity | 6.10E-04 |
| 19 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 7.80E-04 |
| 20 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.05E-03 |
| 21 | GO:0004089: carbonate dehydratase activity | 1.25E-03 |
| 22 | GO:0043424: protein histidine kinase binding | 1.78E-03 |
| 23 | GO:0033612: receptor serine/threonine kinase binding | 1.90E-03 |
| 24 | GO:0005102: receptor binding | 2.39E-03 |
| 25 | GO:0048038: quinone binding | 3.05E-03 |
| 26 | GO:0008236: serine-type peptidase activity | 4.53E-03 |
| 27 | GO:0004222: metalloendopeptidase activity | 5.02E-03 |
| 28 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 9.29E-03 |
| 29 | GO:0019843: rRNA binding | 1.21E-02 |
| 30 | GO:0005509: calcium ion binding | 1.26E-02 |
| 31 | GO:0004252: serine-type endopeptidase activity | 1.30E-02 |
| 32 | GO:0044212: transcription regulatory region DNA binding | 1.37E-02 |
| 33 | GO:0046910: pectinesterase inhibitor activity | 1.45E-02 |
| 34 | GO:0042802: identical protein binding | 1.80E-02 |
| 35 | GO:0046982: protein heterodimerization activity | 2.05E-02 |
| 36 | GO:0016788: hydrolase activity, acting on ester bonds | 2.10E-02 |
| 37 | GO:0052689: carboxylic ester hydrolase activity | 2.60E-02 |
| 38 | GO:0004871: signal transducer activity | 2.84E-02 |
| 39 | GO:0003924: GTPase activity | 3.19E-02 |
| 40 | GO:0004519: endonuclease activity | 3.39E-02 |
| 41 | GO:0008270: zinc ion binding | 4.24E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 3.65E-09 |
| 2 | GO:0009507: chloroplast | 1.78E-07 |
| 3 | GO:0009579: thylakoid | 4.14E-07 |
| 4 | GO:0009523: photosystem II | 2.12E-06 |
| 5 | GO:0010319: stromule | 3.75E-06 |
| 6 | GO:0009570: chloroplast stroma | 4.63E-06 |
| 7 | GO:0048046: apoplast | 7.14E-06 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.14E-05 |
| 9 | GO:0030095: chloroplast photosystem II | 3.34E-05 |
| 10 | GO:0042651: thylakoid membrane | 5.56E-05 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 6.66E-05 |
| 12 | GO:0005960: glycine cleavage complex | 1.76E-04 |
| 13 | GO:0031977: thylakoid lumen | 4.05E-04 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 5.30E-04 |
| 15 | GO:0005763: mitochondrial small ribosomal subunit | 7.80E-04 |
| 16 | GO:0016324: apical plasma membrane | 9.59E-04 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 1.78E-03 |
| 18 | GO:0046658: anchored component of plasma membrane | 1.81E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 2.91E-03 |
| 20 | GO:0009534: chloroplast thylakoid | 8.14E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 1.03E-02 |
| 22 | GO:0009941: chloroplast envelope | 1.54E-02 |
| 23 | GO:0005615: extracellular space | 1.65E-02 |
| 24 | GO:0009536: plastid | 1.68E-02 |
| 25 | GO:0009505: plant-type cell wall | 1.72E-02 |
| 26 | GO:0031969: chloroplast membrane | 2.42E-02 |