GO Enrichment Analysis of Co-expressed Genes with
AT5G44320
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 2 | GO:0017126: nucleologenesis | 0.00E+00 |
| 3 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 4 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 5 | GO:0031564: transcription antitermination | 0.00E+00 |
| 6 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:1902626: assembly of large subunit precursor of preribosome | 1.13E-04 |
| 8 | GO:0042256: mature ribosome assembly | 1.13E-04 |
| 9 | GO:0000460: maturation of 5.8S rRNA | 2.30E-04 |
| 10 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.30E-04 |
| 11 | GO:0042273: ribosomal large subunit biogenesis | 2.30E-04 |
| 12 | GO:0018279: protein N-linked glycosylation via asparagine | 2.95E-04 |
| 13 | GO:0000470: maturation of LSU-rRNA | 3.65E-04 |
| 14 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.36E-04 |
| 15 | GO:0000054: ribosomal subunit export from nucleus | 4.36E-04 |
| 16 | GO:0009423: chorismate biosynthetic process | 4.36E-04 |
| 17 | GO:0031930: mitochondria-nucleus signaling pathway | 4.36E-04 |
| 18 | GO:0042773: ATP synthesis coupled electron transport | 5.11E-04 |
| 19 | GO:0006364: rRNA processing | 5.54E-04 |
| 20 | GO:0006102: isocitrate metabolic process | 5.89E-04 |
| 21 | GO:0006098: pentose-phosphate shunt | 7.52E-04 |
| 22 | GO:0009073: aromatic amino acid family biosynthetic process | 1.01E-03 |
| 23 | GO:0009790: embryo development | 1.11E-03 |
| 24 | GO:0045037: protein import into chloroplast stroma | 1.11E-03 |
| 25 | GO:0006094: gluconeogenesis | 1.20E-03 |
| 26 | GO:0010588: cotyledon vascular tissue pattern formation | 1.20E-03 |
| 27 | GO:0000162: tryptophan biosynthetic process | 1.50E-03 |
| 28 | GO:0051302: regulation of cell division | 1.72E-03 |
| 29 | GO:0016226: iron-sulfur cluster assembly | 1.95E-03 |
| 30 | GO:0071215: cellular response to abscisic acid stimulus | 2.06E-03 |
| 31 | GO:0008033: tRNA processing | 2.42E-03 |
| 32 | GO:0010501: RNA secondary structure unwinding | 2.42E-03 |
| 33 | GO:0000413: protein peptidyl-prolyl isomerization | 2.42E-03 |
| 34 | GO:0010305: leaf vascular tissue pattern formation | 2.55E-03 |
| 35 | GO:0016126: sterol biosynthetic process | 3.77E-03 |
| 36 | GO:0009631: cold acclimation | 4.99E-03 |
| 37 | GO:0009853: photorespiration | 5.31E-03 |
| 38 | GO:0006099: tricarboxylic acid cycle | 5.47E-03 |
| 39 | GO:0009793: embryo development ending in seed dormancy | 5.82E-03 |
| 40 | GO:0009664: plant-type cell wall organization | 7.40E-03 |
| 41 | GO:0006096: glycolytic process | 8.74E-03 |
| 42 | GO:0048367: shoot system development | 8.93E-03 |
| 43 | GO:0009651: response to salt stress | 9.33E-03 |
| 44 | GO:0009845: seed germination | 1.23E-02 |
| 45 | GO:0009414: response to water deprivation | 1.26E-02 |
| 46 | GO:0006413: translational initiation | 1.39E-02 |
| 47 | GO:0009451: RNA modification | 1.49E-02 |
| 48 | GO:0009617: response to bacterium | 1.66E-02 |
| 49 | GO:0009409: response to cold | 1.75E-02 |
| 50 | GO:0009826: unidimensional cell growth | 1.94E-02 |
| 51 | GO:0042254: ribosome biogenesis | 2.02E-02 |
| 52 | GO:0006970: response to osmotic stress | 2.10E-02 |
| 53 | GO:0048366: leaf development | 2.24E-02 |
| 54 | GO:0006886: intracellular protein transport | 2.70E-02 |
| 55 | GO:0032259: methylation | 2.98E-02 |
| 56 | GO:0006397: mRNA processing | 3.16E-02 |
| 57 | GO:0048364: root development | 3.16E-02 |
| 58 | GO:0009735: response to cytokinin | 4.33E-02 |
| 59 | GO:0009611: response to wounding | 4.69E-02 |
| 60 | GO:0051301: cell division | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.24E-05 |
| 4 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.53E-05 |
| 5 | GO:0051536: iron-sulfur cluster binding | 4.64E-05 |
| 6 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 6.44E-05 |
| 7 | GO:0070181: small ribosomal subunit rRNA binding | 1.13E-04 |
| 8 | GO:0043023: ribosomal large subunit binding | 1.69E-04 |
| 9 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 1.69E-04 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 2.95E-04 |
| 11 | GO:0004332: fructose-bisphosphate aldolase activity | 3.65E-04 |
| 12 | GO:0008143: poly(A) binding | 5.11E-04 |
| 13 | GO:0003676: nucleic acid binding | 5.18E-04 |
| 14 | GO:0003729: mRNA binding | 5.53E-04 |
| 15 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 5.54E-04 |
| 16 | GO:0043022: ribosome binding | 5.89E-04 |
| 17 | GO:0008312: 7S RNA binding | 5.89E-04 |
| 18 | GO:0000166: nucleotide binding | 8.42E-04 |
| 19 | GO:0001054: RNA polymerase I activity | 1.01E-03 |
| 20 | GO:0005507: copper ion binding | 1.30E-03 |
| 21 | GO:0003954: NADH dehydrogenase activity | 1.61E-03 |
| 22 | GO:0001085: RNA polymerase II transcription factor binding | 2.55E-03 |
| 23 | GO:0010181: FMN binding | 2.68E-03 |
| 24 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 2.94E-03 |
| 25 | GO:0004004: ATP-dependent RNA helicase activity | 4.21E-03 |
| 26 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 4.99E-03 |
| 27 | GO:0003697: single-stranded DNA binding | 5.31E-03 |
| 28 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.67E-03 |
| 29 | GO:0003723: RNA binding | 6.74E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.04E-03 |
| 31 | GO:0003690: double-stranded DNA binding | 7.97E-03 |
| 32 | GO:0008026: ATP-dependent helicase activity | 1.04E-02 |
| 33 | GO:0004386: helicase activity | 1.06E-02 |
| 34 | GO:0016829: lyase activity | 1.23E-02 |
| 35 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.28E-02 |
| 36 | GO:0008565: protein transporter activity | 1.32E-02 |
| 37 | GO:0003743: translation initiation factor activity | 1.63E-02 |
| 38 | GO:0008168: methyltransferase activity | 1.94E-02 |
| 39 | GO:0003682: chromatin binding | 2.07E-02 |
| 40 | GO:0005515: protein binding | 2.51E-02 |
| 41 | GO:0042803: protein homodimerization activity | 2.73E-02 |
| 42 | GO:0009055: electron carrier activity | 3.23E-02 |
| 43 | GO:0004519: endonuclease activity | 3.26E-02 |
| 44 | GO:0005524: ATP binding | 3.62E-02 |
| 45 | GO:0016887: ATPase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0030687: preribosome, large subunit precursor | 4.77E-06 |
| 3 | GO:0005730: nucleolus | 9.27E-05 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 2.95E-04 |
| 5 | GO:0005829: cytosol | 6.68E-04 |
| 6 | GO:0010494: cytoplasmic stress granule | 7.52E-04 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 7.52E-04 |
| 8 | GO:0032040: small-subunit processome | 1.11E-03 |
| 9 | GO:0043234: protein complex | 1.50E-03 |
| 10 | GO:0045271: respiratory chain complex I | 1.72E-03 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.18E-03 |
| 12 | GO:0005667: transcription factor complex | 4.06E-03 |
| 13 | GO:0031966: mitochondrial membrane | 7.40E-03 |
| 14 | GO:0005747: mitochondrial respiratory chain complex I | 8.93E-03 |
| 15 | GO:0005834: heterotrimeric G-protein complex | 9.13E-03 |
| 16 | GO:0009706: chloroplast inner membrane | 9.95E-03 |
| 17 | GO:0005623: cell | 1.19E-02 |
| 18 | GO:0009506: plasmodesma | 1.50E-02 |
| 19 | GO:0016020: membrane | 1.56E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 1.79E-02 |
| 21 | GO:0005634: nucleus | 2.05E-02 |
| 22 | GO:0022625: cytosolic large ribosomal subunit | 2.41E-02 |
| 23 | GO:0005739: mitochondrion | 3.35E-02 |
| 24 | GO:0005774: vacuolar membrane | 4.47E-02 |