co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G43680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010378: temperature compensation of the circadian clock	0.00E+00
2	GO:0015015: heparan sulfate proteoglycan biosynthetic process, enzymatic modification	0.00E+00
3	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
4	GO:0071311: cellular response to acetate	0.00E+00
5	GO:0071260: cellular response to mechanical stimulus	0.00E+00
6	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
7	GO:0009768: photosynthesis, light harvesting in photosystem I	1.38E-07
8	GO:0030259: lipid glycosylation	4.79E-07
9	GO:0009409: response to cold	8.13E-07
10	GO:0006646: phosphatidylethanolamine biosynthetic process	8.22E-06
11	GO:0000380: alternative mRNA splicing, via spliceosome	1.37E-05
12	GO:0009645: response to low light intensity stimulus	4.01E-05
13	GO:0015812: gamma-aminobutyric acid transport	9.50E-05
14	GO:0018298: protein-chromophore linkage	1.03E-04
15	GO:0010218: response to far red light	1.19E-04
16	GO:0006816: calcium ion transport	1.41E-04
17	GO:0045087: innate immune response	1.45E-04
18	GO:0030003: cellular cation homeostasis	2.24E-04
19	GO:0015914: phospholipid transport	2.24E-04
20	GO:0006611: protein export from nucleus	2.24E-04
21	GO:0009416: response to light stimulus	2.66E-04
22	GO:0006874: cellular calcium ion homeostasis	3.32E-04
23	GO:0071230: cellular response to amino acid stimulus	3.73E-04
24	GO:0045836: positive regulation of meiotic nuclear division	3.73E-04
25	GO:0000055: ribosomal large subunit export from nucleus	3.73E-04
26	GO:0010366: negative regulation of ethylene biosynthetic process	3.73E-04
27	GO:0044211: CTP salvage	5.37E-04
28	GO:0055070: copper ion homeostasis	5.37E-04
29	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	5.37E-04
30	GO:0009058: biosynthetic process	6.92E-04
31	GO:0044206: UMP salvage	7.14E-04
32	GO:0030104: water homeostasis	7.14E-04
33	GO:0015743: malate transport	7.14E-04
34	GO:0051365: cellular response to potassium ion starvation	7.14E-04
35	GO:1903830: magnesium ion transmembrane transport	7.14E-04
36	GO:0048578: positive regulation of long-day photoperiodism, flowering	9.02E-04
37	GO:0045927: positive regulation of growth	9.02E-04
38	GO:0006656: phosphatidylcholine biosynthetic process	9.02E-04
39	GO:0043097: pyrimidine nucleoside salvage	9.02E-04
40	GO:0007029: endoplasmic reticulum organization	9.02E-04
41	GO:0006206: pyrimidine nucleobase metabolic process	1.10E-03
42	GO:0007035: vacuolar acidification	1.10E-03
43	GO:0071333: cellular response to glucose stimulus	1.31E-03
44	GO:0009769: photosynthesis, light harvesting in photosystem II	1.54E-03
45	GO:0015693: magnesium ion transport	1.54E-03
46	GO:0010043: response to zinc ion	1.54E-03
47	GO:0009637: response to blue light	1.68E-03
48	GO:0019827: stem cell population maintenance	1.78E-03
49	GO:0032508: DNA duplex unwinding	1.78E-03
50	GO:0005975: carbohydrate metabolic process	1.96E-03
51	GO:0009827: plant-type cell wall modification	2.03E-03
52	GO:0001510: RNA methylation	2.03E-03
53	GO:0042542: response to hydrogen peroxide	2.07E-03
54	GO:0010114: response to red light	2.16E-03
55	GO:0080167: response to karrikin	2.18E-03
56	GO:0048507: meristem development	2.29E-03
57	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	2.29E-03
58	GO:0090333: regulation of stomatal closure	2.29E-03
59	GO:0009644: response to high light intensity	2.33E-03
60	GO:0008643: carbohydrate transport	2.33E-03
61	GO:0030042: actin filament depolymerization	2.56E-03
62	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.56E-03
63	GO:0015979: photosynthesis	2.57E-03
64	GO:0009970: cellular response to sulfate starvation	2.85E-03
65	GO:0006995: cellular response to nitrogen starvation	2.85E-03
66	GO:0010629: negative regulation of gene expression	2.85E-03
67	GO:0009737: response to abscisic acid	3.54E-03
68	GO:0007015: actin filament organization	4.08E-03
69	GO:0019853: L-ascorbic acid biosynthetic process	4.41E-03
70	GO:0034976: response to endoplasmic reticulum stress	4.75E-03
71	GO:0006406: mRNA export from nucleus	5.10E-03
72	GO:0061077: chaperone-mediated protein folding	5.83E-03
73	GO:0009269: response to desiccation	5.83E-03
74	GO:0051321: meiotic cell cycle	5.83E-03
75	GO:0003333: amino acid transmembrane transport	5.83E-03
76	GO:0019748: secondary metabolic process	6.20E-03
77	GO:0009735: response to cytokinin	6.58E-03
78	GO:0071215: cellular response to abscisic acid stimulus	6.58E-03
79	GO:0010082: regulation of root meristem growth	6.58E-03
80	GO:0006012: galactose metabolic process	6.58E-03
81	GO:0019722: calcium-mediated signaling	6.98E-03
82	GO:0010214: seed coat development	6.98E-03
83	GO:0009738: abscisic acid-activated signaling pathway	7.06E-03
84	GO:0007623: circadian rhythm	7.06E-03
85	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.38E-03
86	GO:0070417: cellular response to cold	7.38E-03
87	GO:0051028: mRNA transport	7.38E-03
88	GO:0034220: ion transmembrane transport	7.79E-03
89	GO:0010501: RNA secondary structure unwinding	7.79E-03
90	GO:0015991: ATP hydrolysis coupled proton transport	7.79E-03
91	GO:0009651: response to salt stress	7.83E-03
92	GO:0015986: ATP synthesis coupled proton transport	8.63E-03
93	GO:0006814: sodium ion transport	8.63E-03
94	GO:0042752: regulation of circadian rhythm	8.63E-03
95	GO:0008654: phospholipid biosynthetic process	9.06E-03
96	GO:1901657: glycosyl compound metabolic process	1.04E-02
97	GO:0016125: sterol metabolic process	1.09E-02
98	GO:0006970: response to osmotic stress	1.18E-02
99	GO:0016126: sterol biosynthetic process	1.23E-02
100	GO:0010029: regulation of seed germination	1.28E-02
101	GO:0006950: response to stress	1.38E-02
102	GO:0009817: defense response to fungus, incompatible interaction	1.49E-02
103	GO:0048481: plant ovule development	1.49E-02
104	GO:0009813: flavonoid biosynthetic process	1.54E-02
105	GO:0009834: plant-type secondary cell wall biogenesis	1.59E-02
106	GO:0006811: ion transport	1.59E-02
107	GO:0010119: regulation of stomatal movement	1.65E-02
108	GO:0030001: metal ion transport	1.93E-02
109	GO:0006812: cation transport	2.47E-02
110	GO:0009585: red, far-red light phototransduction	2.60E-02
111	GO:0006813: potassium ion transport	2.60E-02
112	GO:0046686: response to cadmium ion	3.14E-02
113	GO:0009845: seed germination	4.15E-02
114	GO:0042744: hydrogen peroxide catabolic process	4.30E-02
115	GO:0007165: signal transduction	4.49E-02
116	GO:0006633: fatty acid biosynthetic process	4.61E-02
117	GO:0006413: translational initiation	4.69E-02
118	GO:0016036: cellular response to phosphate starvation	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0004567: beta-mannosidase activity	0.00E+00
3	GO:0017095: heparan sulfate 6-O-sulfotransferase activity	0.00E+00
4	GO:0080082: esculin beta-glucosidase activity	0.00E+00
5	GO:0015276: ligand-gated ion channel activity	0.00E+00
6	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
7	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
8	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
9	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
10	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
11	GO:0005272: sodium channel activity	0.00E+00
12	GO:0008476: protein-tyrosine sulfotransferase activity	0.00E+00
13	GO:0004306: ethanolamine-phosphate cytidylyltransferase activity	0.00E+00
14	GO:0031409: pigment binding	8.47E-08
15	GO:0016168: chlorophyll binding	2.37E-06
16	GO:0102203: brassicasterol glucosyltransferase activity	9.50E-05
17	GO:0102202: soladodine glucosyltransferase activity	9.50E-05
18	GO:0008066: glutamate receptor activity	9.50E-05
19	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	9.50E-05
20	GO:0030275: LRR domain binding	9.50E-05
21	GO:0016906: sterol 3-beta-glucosyltransferase activity	9.50E-05
22	GO:0080079: cellobiose glucosidase activity	9.50E-05
23	GO:0005262: calcium channel activity	1.88E-04
24	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.24E-04
25	GO:0015180: L-alanine transmembrane transporter activity	2.24E-04
26	GO:0004609: phosphatidylserine decarboxylase activity	2.24E-04
27	GO:0005217: intracellular ligand-gated ion channel activity	2.41E-04
28	GO:0004970: ionotropic glutamate receptor activity	2.41E-04
29	GO:0004096: catalase activity	3.73E-04
30	GO:0015181: arginine transmembrane transporter activity	5.37E-04
31	GO:0043023: ribosomal large subunit binding	5.37E-04
32	GO:0015189: L-lysine transmembrane transporter activity	5.37E-04
33	GO:0005313: L-glutamate transmembrane transporter activity	7.14E-04
34	GO:0008526: phosphatidylinositol transporter activity	7.14E-04
35	GO:0005253: anion channel activity	7.14E-04
36	GO:0004845: uracil phosphoribosyltransferase activity	7.14E-04
37	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	9.02E-04
38	GO:0015562: efflux transmembrane transporter activity	1.10E-03
39	GO:0051117: ATPase binding	1.10E-03
40	GO:0005261: cation channel activity	1.31E-03
41	GO:0004849: uridine kinase activity	1.31E-03
42	GO:0015140: malate transmembrane transporter activity	1.54E-03
43	GO:0004033: aldo-keto reductase (NADP) activity	1.78E-03
44	GO:0003729: mRNA binding	1.89E-03
45	GO:0005267: potassium channel activity	2.03E-03
46	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.29E-03
47	GO:0046961: proton-transporting ATPase activity, rotational mechanism	3.14E-03
48	GO:0004565: beta-galactosidase activity	3.76E-03
49	GO:0015095: magnesium ion transmembrane transporter activity	3.76E-03
50	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	5.26E-03
51	GO:0008324: cation transmembrane transporter activity	5.46E-03
52	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.83E-03
53	GO:0015297: antiporter activity	6.74E-03
54	GO:0003756: protein disulfide isomerase activity	6.98E-03
55	GO:0046873: metal ion transmembrane transporter activity	8.21E-03
56	GO:0008168: methyltransferase activity	1.05E-02
57	GO:0004497: monooxygenase activity	1.36E-02
58	GO:0102483: scopolin beta-glucosidase activity	1.38E-02
59	GO:0005509: calcium ion binding	1.63E-02
60	GO:0050897: cobalt ion binding	1.65E-02
61	GO:0003697: single-stranded DNA binding	1.76E-02
62	GO:0003993: acid phosphatase activity	1.81E-02
63	GO:0008422: beta-glucosidase activity	1.87E-02
64	GO:0004185: serine-type carboxypeptidase activity	2.10E-02
65	GO:0005198: structural molecule activity	2.29E-02
66	GO:0003690: double-stranded DNA binding	2.67E-02
67	GO:0015171: amino acid transmembrane transporter activity	2.80E-02
68	GO:0031625: ubiquitin protein ligase binding	2.80E-02
69	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.00E-02
70	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.14E-02
71	GO:0004650: polygalacturonase activity	3.14E-02
72	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.14E-02
73	GO:0020037: heme binding	3.19E-02
74	GO:0016874: ligase activity	3.20E-02
75	GO:0022857: transmembrane transporter activity	3.20E-02
76	GO:0003779: actin binding	3.27E-02
77	GO:0003723: RNA binding	3.30E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	5.90E-06
2	GO:0016021: integral component of membrane	8.60E-06
3	GO:0009522: photosystem I	3.11E-05
4	GO:0010287: plastoglobule	5.58E-05
5	GO:0012510: trans-Golgi network transport vesicle membrane	9.50E-05
6	GO:0009523: photosystem II	6.82E-04
7	GO:0009517: PSII associated light-harvesting complex II	7.14E-04
8	GO:0016471: vacuolar proton-transporting V-type ATPase complex	7.14E-04
9	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	9.02E-04
10	GO:0005851: eukaryotic translation initiation factor 2B complex	1.10E-03
11	GO:0009579: thylakoid	1.89E-03
12	GO:0009534: chloroplast thylakoid	1.92E-03
13	GO:0005618: cell wall	3.11E-03
14	GO:0031307: integral component of mitochondrial outer membrane	3.44E-03
15	GO:0005654: nucleoplasm	4.99E-03
16	GO:0005773: vacuole	5.53E-03
17	GO:0009505: plant-type cell wall	5.93E-03
18	GO:0015629: actin cytoskeleton	6.58E-03
19	GO:0005774: vacuolar membrane	8.27E-03
20	GO:0005777: peroxisome	8.78E-03
21	GO:0009941: chloroplast envelope	1.40E-02
22	GO:0009535: chloroplast thylakoid membrane	1.43E-02
23	GO:0000151: ubiquitin ligase complex	1.49E-02
24	GO:0000325: plant-type vacuole	1.65E-02
25	GO:0000786: nucleosome	1.70E-02
26	GO:0005794: Golgi apparatus	2.30E-02
27	GO:0016020: membrane	2.34E-02
28	GO:0031966: mitochondrial membrane	2.47E-02
29	GO:0005783: endoplasmic reticulum	2.75E-02
30	GO:0048046: apoplast	2.93E-02
31	GO:0009506: plasmodesma	3.17E-02
32	GO:0022626: cytosolic ribosome	3.41E-02
33	GO:0009507: chloroplast	3.71E-02
34	GO:0005623: cell	4.00E-02
35	GO:0009705: plant-type vacuole membrane	4.93E-02