GO Enrichment Analysis of Co-expressed Genes with
AT5G42950
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0007160: cell-matrix adhesion | 0.00E+00 |
| 2 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 3 | GO:2001253: regulation of histone H3-K36 trimethylation | 0.00E+00 |
| 4 | GO:0032889: regulation of vacuole fusion, non-autophagic | 0.00E+00 |
| 5 | GO:0010793: regulation of mRNA export from nucleus | 0.00E+00 |
| 6 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 7 | GO:0016236: macroautophagy | 0.00E+00 |
| 8 | GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly | 0.00E+00 |
| 9 | GO:0006635: fatty acid beta-oxidation | 1.87E-05 |
| 10 | GO:0006886: intracellular protein transport | 1.96E-05 |
| 11 | GO:0030242: pexophagy | 6.74E-05 |
| 12 | GO:0031338: regulation of vesicle fusion | 6.74E-05 |
| 13 | GO:0009966: regulation of signal transduction | 6.74E-05 |
| 14 | GO:0050684: regulation of mRNA processing | 1.62E-04 |
| 15 | GO:0007584: response to nutrient | 1.62E-04 |
| 16 | GO:0035542: regulation of SNARE complex assembly | 1.62E-04 |
| 17 | GO:0016197: endosomal transport | 1.62E-04 |
| 18 | GO:0019395: fatty acid oxidation | 1.62E-04 |
| 19 | GO:0009695: jasmonic acid biosynthetic process | 2.09E-04 |
| 20 | GO:0032784: regulation of DNA-templated transcription, elongation | 2.75E-04 |
| 21 | GO:0090630: activation of GTPase activity | 2.75E-04 |
| 22 | GO:0072583: clathrin-dependent endocytosis | 3.98E-04 |
| 23 | GO:0051601: exocyst localization | 3.98E-04 |
| 24 | GO:2000114: regulation of establishment of cell polarity | 3.98E-04 |
| 25 | GO:0033320: UDP-D-xylose biosynthetic process | 5.32E-04 |
| 26 | GO:1990937: xylan acetylation | 5.32E-04 |
| 27 | GO:0010107: potassium ion import | 5.32E-04 |
| 28 | GO:0045324: late endosome to vacuole transport | 5.32E-04 |
| 29 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 5.32E-04 |
| 30 | GO:0006646: phosphatidylethanolamine biosynthetic process | 5.32E-04 |
| 31 | GO:0010225: response to UV-C | 6.73E-04 |
| 32 | GO:0034052: positive regulation of plant-type hypersensitive response | 6.73E-04 |
| 33 | GO:0042732: D-xylose metabolic process | 8.23E-04 |
| 34 | GO:0045491: xylan metabolic process | 8.23E-04 |
| 35 | GO:0006751: glutathione catabolic process | 8.23E-04 |
| 36 | GO:0033962: cytoplasmic mRNA processing body assembly | 9.79E-04 |
| 37 | GO:0017148: negative regulation of translation | 9.79E-04 |
| 38 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.14E-03 |
| 39 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 1.14E-03 |
| 40 | GO:0048766: root hair initiation | 1.32E-03 |
| 41 | GO:0006605: protein targeting | 1.32E-03 |
| 42 | GO:0006468: protein phosphorylation | 1.38E-03 |
| 43 | GO:0060321: acceptance of pollen | 1.50E-03 |
| 44 | GO:0048193: Golgi vesicle transport | 1.50E-03 |
| 45 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.69E-03 |
| 46 | GO:0009846: pollen germination | 1.72E-03 |
| 47 | GO:0008202: steroid metabolic process | 1.89E-03 |
| 48 | GO:0006535: cysteine biosynthetic process from serine | 2.10E-03 |
| 49 | GO:0006397: mRNA processing | 2.10E-03 |
| 50 | GO:0006298: mismatch repair | 2.10E-03 |
| 51 | GO:0000266: mitochondrial fission | 2.53E-03 |
| 52 | GO:0006006: glucose metabolic process | 2.76E-03 |
| 53 | GO:0009969: xyloglucan biosynthetic process | 3.23E-03 |
| 54 | GO:0009225: nucleotide-sugar metabolic process | 3.23E-03 |
| 55 | GO:0007033: vacuole organization | 3.23E-03 |
| 56 | GO:0019344: cysteine biosynthetic process | 3.73E-03 |
| 57 | GO:0006289: nucleotide-excision repair | 3.73E-03 |
| 58 | GO:0016575: histone deacetylation | 3.99E-03 |
| 59 | GO:0031408: oxylipin biosynthetic process | 4.26E-03 |
| 60 | GO:0035428: hexose transmembrane transport | 4.53E-03 |
| 61 | GO:0045492: xylan biosynthetic process | 5.09E-03 |
| 62 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 5.38E-03 |
| 63 | GO:0010118: stomatal movement | 5.68E-03 |
| 64 | GO:0046323: glucose import | 5.98E-03 |
| 65 | GO:0006623: protein targeting to vacuole | 6.60E-03 |
| 66 | GO:0008654: phospholipid biosynthetic process | 6.60E-03 |
| 67 | GO:0006891: intra-Golgi vesicle-mediated transport | 6.91E-03 |
| 68 | GO:0010583: response to cyclopentenone | 7.24E-03 |
| 69 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 8.87E-03 |
| 70 | GO:0046777: protein autophosphorylation | 9.17E-03 |
| 71 | GO:0009816: defense response to bacterium, incompatible interaction | 9.29E-03 |
| 72 | GO:0008219: cell death | 1.08E-02 |
| 73 | GO:0006869: lipid transport | 1.13E-02 |
| 74 | GO:0009834: plant-type secondary cell wall biogenesis | 1.15E-02 |
| 75 | GO:0006499: N-terminal protein myristoylation | 1.15E-02 |
| 76 | GO:0010043: response to zinc ion | 1.19E-02 |
| 77 | GO:0045087: innate immune response | 1.27E-02 |
| 78 | GO:0006099: tricarboxylic acid cycle | 1.31E-02 |
| 79 | GO:0006887: exocytosis | 1.44E-02 |
| 80 | GO:0006897: endocytosis | 1.44E-02 |
| 81 | GO:0000209: protein polyubiquitination | 1.57E-02 |
| 82 | GO:0031347: regulation of defense response | 1.74E-02 |
| 83 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.74E-02 |
| 84 | GO:0010224: response to UV-B | 1.93E-02 |
| 85 | GO:0006417: regulation of translation | 2.02E-02 |
| 86 | GO:0009738: abscisic acid-activated signaling pathway | 2.18E-02 |
| 87 | GO:0009626: plant-type hypersensitive response | 2.22E-02 |
| 88 | GO:0009611: response to wounding | 2.31E-02 |
| 89 | GO:0035556: intracellular signal transduction | 2.38E-02 |
| 90 | GO:0009624: response to nematode | 2.42E-02 |
| 91 | GO:0018105: peptidyl-serine phosphorylation | 2.47E-02 |
| 92 | GO:0009742: brassinosteroid mediated signaling pathway | 2.52E-02 |
| 93 | GO:0055085: transmembrane transport | 2.86E-02 |
| 94 | GO:0009845: seed germination | 3.00E-02 |
| 95 | GO:0006633: fatty acid biosynthetic process | 3.33E-02 |
| 96 | GO:0006413: translational initiation | 3.39E-02 |
| 97 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.86E-02 |
| 98 | GO:0006470: protein dephosphorylation | 3.92E-02 |
| 99 | GO:0008380: RNA splicing | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 2 | GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity | 0.00E+00 |
| 3 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 6.74E-05 |
| 4 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 1.62E-04 |
| 5 | GO:0003988: acetyl-CoA C-acyltransferase activity | 1.62E-04 |
| 6 | GO:0004609: phosphatidylserine decarboxylase activity | 1.62E-04 |
| 7 | GO:0005047: signal recognition particle binding | 2.75E-04 |
| 8 | GO:0004383: guanylate cyclase activity | 2.75E-04 |
| 9 | GO:0030276: clathrin binding | 3.82E-04 |
| 10 | GO:0001653: peptide receptor activity | 3.98E-04 |
| 11 | GO:0004108: citrate (Si)-synthase activity | 3.98E-04 |
| 12 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 3.98E-04 |
| 13 | GO:0004300: enoyl-CoA hydratase activity | 3.98E-04 |
| 14 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 5.32E-04 |
| 15 | GO:0001106: RNA polymerase II transcription corepressor activity | 5.32E-04 |
| 16 | GO:0017137: Rab GTPase binding | 6.73E-04 |
| 17 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 7.37E-04 |
| 18 | GO:0048040: UDP-glucuronate decarboxylase activity | 8.23E-04 |
| 19 | GO:0004124: cysteine synthase activity | 9.79E-04 |
| 20 | GO:0070403: NAD+ binding | 9.79E-04 |
| 21 | GO:0003730: mRNA 3'-UTR binding | 9.79E-04 |
| 22 | GO:0005337: nucleoside transmembrane transporter activity | 1.32E-03 |
| 23 | GO:0008142: oxysterol binding | 1.50E-03 |
| 24 | GO:0003724: RNA helicase activity | 1.50E-03 |
| 25 | GO:0005267: potassium channel activity | 1.50E-03 |
| 26 | GO:0004674: protein serine/threonine kinase activity | 1.90E-03 |
| 27 | GO:0019888: protein phosphatase regulator activity | 2.76E-03 |
| 28 | GO:0004725: protein tyrosine phosphatase activity | 3.48E-03 |
| 29 | GO:0004407: histone deacetylase activity | 3.73E-03 |
| 30 | GO:0005524: ATP binding | 4.25E-03 |
| 31 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 4.26E-03 |
| 32 | GO:0005355: glucose transmembrane transporter activity | 6.28E-03 |
| 33 | GO:0005525: GTP binding | 7.73E-03 |
| 34 | GO:0003684: damaged DNA binding | 7.90E-03 |
| 35 | GO:0005509: calcium ion binding | 9.09E-03 |
| 36 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 9.65E-03 |
| 37 | GO:0004683: calmodulin-dependent protein kinase activity | 1.00E-02 |
| 38 | GO:0005096: GTPase activator activity | 1.11E-02 |
| 39 | GO:0003697: single-stranded DNA binding | 1.27E-02 |
| 40 | GO:0003924: GTPase activity | 1.27E-02 |
| 41 | GO:0008422: beta-glucosidase activity | 1.35E-02 |
| 42 | GO:0000149: SNARE binding | 1.35E-02 |
| 43 | GO:0050661: NADP binding | 1.39E-02 |
| 44 | GO:0016491: oxidoreductase activity | 1.43E-02 |
| 45 | GO:0035091: phosphatidylinositol binding | 1.61E-02 |
| 46 | GO:0004672: protein kinase activity | 1.64E-02 |
| 47 | GO:0005198: structural molecule activity | 1.65E-02 |
| 48 | GO:0003729: mRNA binding | 1.67E-02 |
| 49 | GO:0008289: lipid binding | 1.77E-02 |
| 50 | GO:0015171: amino acid transmembrane transporter activity | 2.02E-02 |
| 51 | GO:0003779: actin binding | 2.37E-02 |
| 52 | GO:0004386: helicase activity | 2.57E-02 |
| 53 | GO:0016740: transferase activity | 2.75E-02 |
| 54 | GO:0030170: pyridoxal phosphate binding | 3.05E-02 |
| 55 | GO:0015144: carbohydrate transmembrane transporter activity | 3.22E-02 |
| 56 | GO:0005516: calmodulin binding | 3.39E-02 |
| 57 | GO:0005351: sugar:proton symporter activity | 3.51E-02 |
| 58 | GO:0008017: microtubule binding | 3.68E-02 |
| 59 | GO:0003743: translation initiation factor activity | 3.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 2 | GO:0008305: integrin complex | 0.00E+00 |
| 3 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 4 | GO:0071942: XPC complex | 0.00E+00 |
| 5 | GO:0000111: nucleotide-excision repair factor 2 complex | 0.00E+00 |
| 6 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 6.74E-05 |
| 7 | GO:0045334: clathrin-coated endocytic vesicle | 6.74E-05 |
| 8 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 6.74E-05 |
| 9 | GO:0030897: HOPS complex | 1.62E-04 |
| 10 | GO:0005829: cytosol | 2.00E-04 |
| 11 | GO:0005886: plasma membrane | 5.64E-04 |
| 12 | GO:0000139: Golgi membrane | 7.14E-04 |
| 13 | GO:0005851: eukaryotic translation initiation factor 2B complex | 8.23E-04 |
| 14 | GO:0030173: integral component of Golgi membrane | 9.79E-04 |
| 15 | GO:0000118: histone deacetylase complex | 9.79E-04 |
| 16 | GO:0030131: clathrin adaptor complex | 1.32E-03 |
| 17 | GO:0009514: glyoxysome | 1.50E-03 |
| 18 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.50E-03 |
| 19 | GO:0030125: clathrin vesicle coat | 2.10E-03 |
| 20 | GO:0005765: lysosomal membrane | 2.31E-03 |
| 21 | GO:0005794: Golgi apparatus | 2.98E-03 |
| 22 | GO:0043234: protein complex | 3.48E-03 |
| 23 | GO:0005905: clathrin-coated pit | 4.26E-03 |
| 24 | GO:0009506: plasmodesma | 4.44E-03 |
| 25 | GO:0009705: plant-type vacuole membrane | 4.48E-03 |
| 26 | GO:0005777: peroxisome | 4.90E-03 |
| 27 | GO:0005770: late endosome | 5.98E-03 |
| 28 | GO:0009504: cell plate | 6.60E-03 |
| 29 | GO:0000785: chromatin | 7.24E-03 |
| 30 | GO:0000145: exocyst | 7.24E-03 |
| 31 | GO:0005768: endosome | 8.80E-03 |
| 32 | GO:0000932: P-body | 8.93E-03 |
| 33 | GO:0005643: nuclear pore | 1.08E-02 |
| 34 | GO:0015934: large ribosomal subunit | 1.19E-02 |
| 35 | GO:0005783: endoplasmic reticulum | 1.25E-02 |
| 36 | GO:0005774: vacuolar membrane | 1.37E-02 |
| 37 | GO:0031902: late endosome membrane | 1.44E-02 |
| 38 | GO:0005856: cytoskeleton | 1.65E-02 |
| 39 | GO:0005681: spliceosomal complex | 2.12E-02 |
| 40 | GO:0012505: endomembrane system | 2.37E-02 |
| 41 | GO:0005737: cytoplasm | 2.65E-02 |
| 42 | GO:0009524: phragmoplast | 2.94E-02 |
| 43 | GO:0005802: trans-Golgi network | 3.61E-02 |
| 44 | GO:0016021: integral component of membrane | 3.95E-02 |