co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G42800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901038: cyanidin 3-O-glucoside metabolic process	0.00E+00
2	GO:0006971: hypotonic response	0.00E+00
3	GO:0006792: regulation of sulfur utilization	0.00E+00
4	GO:0009813: flavonoid biosynthetic process	1.48E-07
5	GO:0010411: xyloglucan metabolic process	4.37E-06
6	GO:0042546: cell wall biogenesis	1.68E-05
7	GO:0009411: response to UV	2.16E-05
8	GO:0000271: polysaccharide biosynthetic process	3.22E-05
9	GO:0045489: pectin biosynthetic process	3.63E-05
10	GO:0050691: regulation of defense response to virus by host	1.08E-04
11	GO:1900384: regulation of flavonol biosynthetic process	1.08E-04
12	GO:0033481: galacturonate biosynthetic process	1.08E-04
13	GO:1901537: positive regulation of DNA demethylation	1.08E-04
14	GO:0009962: regulation of flavonoid biosynthetic process	1.08E-04
15	GO:2000029: regulation of proanthocyanidin biosynthetic process	1.08E-04
16	GO:0051555: flavonol biosynthetic process	1.44E-04
17	GO:0009718: anthocyanin-containing compound biosynthetic process	2.25E-04
18	GO:2000693: positive regulation of seed maturation	2.52E-04
19	GO:0031542: positive regulation of anthocyanin biosynthetic process	2.52E-04
20	GO:0071497: cellular response to freezing	2.52E-04
21	GO:1900386: positive regulation of flavonol biosynthetic process	2.52E-04
22	GO:0071395: cellular response to jasmonic acid stimulus	2.52E-04
23	GO:0071555: cell wall organization	2.82E-04
24	GO:0009225: nucleotide-sugar metabolic process	2.87E-04
25	GO:0009826: unidimensional cell growth	2.94E-04
26	GO:0031347: regulation of defense response	3.37E-04
27	GO:0010224: response to UV-B	4.05E-04
28	GO:0010253: UDP-rhamnose biosynthetic process	4.19E-04
29	GO:0010581: regulation of starch biosynthetic process	4.19E-04
30	GO:0040007: growth	5.16E-04
31	GO:1902358: sulfate transmembrane transport	6.01E-04
32	GO:0009741: response to brassinosteroid	7.01E-04
33	GO:0010583: response to cyclopentenone	9.14E-04
34	GO:0016131: brassinosteroid metabolic process	1.01E-03
35	GO:0046283: anthocyanin-containing compound metabolic process	1.01E-03
36	GO:0010438: cellular response to sulfur starvation	1.01E-03
37	GO:0071368: cellular response to cytokinin stimulus	1.01E-03
38	GO:0009828: plant-type cell wall loosening	1.03E-03
39	GO:1902456: regulation of stomatal opening	1.23E-03
40	GO:0042732: D-xylose metabolic process	1.23E-03
41	GO:0009267: cellular response to starvation	1.23E-03
42	GO:0010315: auxin efflux	1.23E-03
43	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.29E-03
44	GO:0030154: cell differentiation	1.49E-03
45	GO:0006355: regulation of transcription, DNA-templated	1.65E-03
46	GO:0051510: regulation of unidimensional cell growth	1.73E-03
47	GO:0050829: defense response to Gram-negative bacterium	1.73E-03
48	GO:0016051: carbohydrate biosynthetic process	1.99E-03
49	GO:0010439: regulation of glucosinolate biosynthetic process	2.00E-03
50	GO:0019432: triglyceride biosynthetic process	2.57E-03
51	GO:0080167: response to karrikin	2.71E-03
52	GO:0010200: response to chitin	2.83E-03
53	GO:0046777: protein autophosphorylation	2.95E-03
54	GO:0043069: negative regulation of programmed cell death	3.20E-03
55	GO:1903507: negative regulation of nucleic acid-templated transcription	3.53E-03
56	GO:0000272: polysaccharide catabolic process	3.53E-03
57	GO:0000038: very long-chain fatty acid metabolic process	3.53E-03
58	GO:0009698: phenylpropanoid metabolic process	3.53E-03
59	GO:0016925: protein sumoylation	3.87E-03
60	GO:0030036: actin cytoskeleton organization	4.23E-03
61	GO:0018107: peptidyl-threonine phosphorylation	4.23E-03
62	GO:0006351: transcription, DNA-templated	4.32E-03
63	GO:0009751: response to salicylic acid	4.36E-03
64	GO:0010540: basipetal auxin transport	4.59E-03
65	GO:0034605: cellular response to heat	4.59E-03
66	GO:0002237: response to molecule of bacterial origin	4.59E-03
67	GO:0009969: xyloglucan biosynthetic process	4.96E-03
68	GO:0005985: sucrose metabolic process	4.96E-03
69	GO:0006636: unsaturated fatty acid biosynthetic process	5.35E-03
70	GO:2000377: regulation of reactive oxygen species metabolic process	5.75E-03
71	GO:0006487: protein N-linked glycosylation	5.75E-03
72	GO:0019953: sexual reproduction	6.15E-03
73	GO:0010026: trichome differentiation	6.15E-03
74	GO:0006357: regulation of transcription from RNA polymerase II promoter	6.33E-03
75	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.99E-03
76	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.42E-03
77	GO:0042127: regulation of cell proliferation	7.87E-03
78	GO:0010214: seed coat development	7.87E-03
79	GO:0010584: pollen exine formation	7.87E-03
80	GO:0040008: regulation of growth	8.01E-03
81	GO:0010118: stomatal movement	8.79E-03
82	GO:0048653: anther development	8.79E-03
83	GO:0035556: intracellular signal transduction	9.85E-03
84	GO:0009791: post-embryonic development	1.02E-02
85	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.07E-02
86	GO:0002229: defense response to oomycetes	1.07E-02
87	GO:0045893: positive regulation of transcription, DNA-templated	1.10E-02
88	GO:0019760: glucosinolate metabolic process	1.23E-02
89	GO:0001666: response to hypoxia	1.39E-02
90	GO:0009860: pollen tube growth	1.40E-02
91	GO:0006468: protein phosphorylation	1.61E-02
92	GO:0048767: root hair elongation	1.74E-02
93	GO:0044550: secondary metabolite biosynthetic process	1.76E-02
94	GO:0009407: toxin catabolic process	1.80E-02
95	GO:0048527: lateral root development	1.86E-02
96	GO:0010119: regulation of stomatal movement	1.86E-02
97	GO:0045454: cell redox homeostasis	1.94E-02
98	GO:0009867: jasmonic acid mediated signaling pathway	1.99E-02
99	GO:0009637: response to blue light	1.99E-02
100	GO:0055114: oxidation-reduction process	2.03E-02
101	GO:0006629: lipid metabolic process	2.39E-02
102	GO:0009753: response to jasmonic acid	2.56E-02
103	GO:0009636: response to toxic substance	2.59E-02
104	GO:0009664: plant-type cell wall organization	2.80E-02
105	GO:0009809: lignin biosynthetic process	2.94E-02
106	GO:0006486: protein glycosylation	2.94E-02
107	GO:0009873: ethylene-activated signaling pathway	3.08E-02
108	GO:0048316: seed development	3.39E-02
109	GO:0018105: peptidyl-serine phosphorylation	3.86E-02
110	GO:0009742: brassinosteroid mediated signaling pathway	3.94E-02
111	GO:0009738: abscisic acid-activated signaling pathway	4.09E-02
112	GO:0009416: response to light stimulus	4.23E-02
113	GO:0009845: seed germination	4.69E-02
114	GO:0042744: hydrogen peroxide catabolic process	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0090411: brassinosteroid binding	0.00E+00
2	GO:0102580: cyanidin 3-O-glucoside 2-O''-xylosyltransferase activity	0.00E+00
3	GO:0016711: flavonoid 3'-monooxygenase activity	0.00E+00
4	GO:0045430: chalcone isomerase activity	1.03E-05
5	GO:0035252: UDP-xylosyltransferase activity	2.57E-05
6	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.07E-05
7	GO:0045486: naringenin 3-dioxygenase activity	1.08E-04
8	GO:0080132: fatty acid alpha-hydroxylase activity	1.08E-04
9	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.13E-04
10	GO:0008460: dTDP-glucose 4,6-dehydratase activity	2.52E-04
11	GO:0010280: UDP-L-rhamnose synthase activity	2.52E-04
12	GO:0050377: UDP-glucose 4,6-dehydratase activity	2.52E-04
13	GO:0050736: O-malonyltransferase activity	2.52E-04
14	GO:0048531: beta-1,3-galactosyltransferase activity	2.52E-04
15	GO:0043169: cation binding	4.19E-04
16	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.74E-04
17	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	6.01E-04
18	GO:0033843: xyloglucan 6-xylosyltransferase activity	6.01E-04
19	GO:0043565: sequence-specific DNA binding	7.13E-04
20	GO:0003700: transcription factor activity, sequence-specific DNA binding	7.54E-04
21	GO:0016758: transferase activity, transferring hexosyl groups	7.77E-04
22	GO:0050378: UDP-glucuronate 4-epimerase activity	7.98E-04
23	GO:0031386: protein tag	1.01E-03
24	GO:0044212: transcription regulatory region DNA binding	1.28E-03
25	GO:0016161: beta-amylase activity	1.47E-03
26	GO:0019899: enzyme binding	1.73E-03
27	GO:0016621: cinnamoyl-CoA reductase activity	1.73E-03
28	GO:0004674: protein serine/threonine kinase activity	2.12E-03
29	GO:0008271: secondary active sulfate transmembrane transporter activity	2.28E-03
30	GO:0004672: protein kinase activity	2.51E-03
31	GO:0016207: 4-coumarate-CoA ligase activity	2.57E-03
32	GO:0016757: transferase activity, transferring glycosyl groups	3.26E-03
33	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.40E-03
34	GO:0008327: methyl-CpG binding	3.53E-03
35	GO:0000976: transcription regulatory region sequence-specific DNA binding	3.87E-03
36	GO:0015116: sulfate transmembrane transporter activity	3.87E-03
37	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.90E-03
38	GO:0005506: iron ion binding	5.36E-03
39	GO:0031418: L-ascorbic acid binding	5.75E-03
40	GO:0003714: transcription corepressor activity	5.75E-03
41	GO:0016491: oxidoreductase activity	8.33E-03
42	GO:0001085: RNA polymerase II transcription factor binding	9.26E-03
43	GO:0016853: isomerase activity	9.74E-03
44	GO:0020037: heme binding	1.09E-02
45	GO:0016740: transferase activity	1.18E-02
46	GO:0005200: structural constituent of cytoskeleton	1.28E-02
47	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.31E-02
48	GO:0019825: oxygen binding	1.44E-02
49	GO:0008375: acetylglucosaminyltransferase activity	1.51E-02
50	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.51E-02
51	GO:0004806: triglyceride lipase activity	1.56E-02
52	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.86E-02
53	GO:0004364: glutathione transferase activity	2.31E-02
54	GO:0003824: catalytic activity	2.52E-02
55	GO:0015293: symporter activity	2.59E-02
56	GO:0003677: DNA binding	2.87E-02
57	GO:0016301: kinase activity	2.89E-02
58	GO:0016298: lipase activity	3.02E-02
59	GO:0031625: ubiquitin protein ligase binding	3.17E-02
60	GO:0046983: protein dimerization activity	3.22E-02
61	GO:0045735: nutrient reservoir activity	3.32E-02
62	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.39E-02
63	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.55E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.55E-02
65	GO:0016874: ligase activity	3.63E-02
66	GO:0022857: transmembrane transporter activity	3.63E-02
67	GO:0015035: protein disulfide oxidoreductase activity	3.86E-02
68	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.52E-02
69	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0090568: nuclear transcriptional repressor complex	0.00E+00
2	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.19E-04
3	GO:0005794: Golgi apparatus	7.75E-04
4	GO:0005615: extracellular space	1.37E-03
5	GO:0010369: chromocenter	1.47E-03
6	GO:0048046: apoplast	3.72E-03
7	GO:0009705: plant-type vacuole membrane	8.39E-03
8	GO:0000139: Golgi membrane	8.68E-03
9	GO:0032580: Golgi cisterna membrane	1.23E-02
10	GO:0005618: cell wall	1.42E-02
11	GO:0005667: transcription factor complex	1.51E-02
12	GO:0005856: cytoskeleton	2.59E-02
13	GO:0009505: plant-type cell wall	2.98E-02
14	GO:0005887: integral component of plasma membrane	3.24E-02
15	GO:0016021: integral component of membrane	3.38E-02
16	GO:0009506: plasmodesma	4.37E-02