Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42680

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090393: sepal giant cell development0.00E+00
2GO:0071554: cell wall organization or biogenesis2.99E-06
3GO:0045489: pectin biosynthetic process6.42E-05
4GO:0007267: cell-cell signaling1.29E-04
5GO:0071555: cell wall organization1.30E-04
6GO:0071370: cellular response to gibberellin stimulus1.42E-04
7GO:2000123: positive regulation of stomatal complex development3.25E-04
8GO:0042546: cell wall biogenesis4.47E-04
9GO:0006833: water transport4.63E-04
10GO:0017157: regulation of exocytosis5.33E-04
11GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway5.33E-04
12GO:0015840: urea transport5.33E-04
13GO:0032877: positive regulation of DNA endoreduplication7.63E-04
14GO:0080170: hydrogen peroxide transmembrane transport7.63E-04
15GO:0051016: barbed-end actin filament capping7.63E-04
16GO:0080167: response to karrikin7.75E-04
17GO:0019722: calcium-mediated signaling7.98E-04
18GO:0000271: polysaccharide biosynthetic process9.27E-04
19GO:0034220: ion transmembrane transport9.27E-04
20GO:0009741: response to brassinosteroid9.96E-04
21GO:2000038: regulation of stomatal complex development1.01E-03
22GO:0006546: glycine catabolic process1.01E-03
23GO:0006749: glutathione metabolic process1.01E-03
24GO:0046785: microtubule polymerization1.28E-03
25GO:0010375: stomatal complex patterning1.28E-03
26GO:0010583: response to cyclopentenone1.30E-03
27GO:0045926: negative regulation of growth1.88E-03
28GO:0009612: response to mechanical stimulus1.88E-03
29GO:0009554: megasporogenesis1.88E-03
30GO:0010555: response to mannitol1.88E-03
31GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.88E-03
32GO:2000067: regulation of root morphogenesis1.88E-03
33GO:0010411: xyloglucan metabolic process2.05E-03
34GO:0009645: response to low light intensity stimulus2.21E-03
35GO:0051510: regulation of unidimensional cell growth2.21E-03
36GO:0045010: actin nucleation2.56E-03
37GO:0052543: callose deposition in cell wall2.56E-03
38GO:0016051: carbohydrate biosynthetic process2.86E-03
39GO:0022900: electron transport chain2.93E-03
40GO:0007186: G-protein coupled receptor signaling pathway2.93E-03
41GO:0009744: response to sucrose3.68E-03
42GO:0009638: phototropism3.71E-03
43GO:0009870: defense response signaling pathway, resistance gene-dependent4.12E-03
44GO:0009750: response to fructose4.55E-03
45GO:0016024: CDP-diacylglycerol biosynthetic process4.99E-03
46GO:0030036: actin cytoskeleton organization5.45E-03
47GO:0050826: response to freezing5.45E-03
48GO:0009725: response to hormone5.45E-03
49GO:0009767: photosynthetic electron transport chain5.45E-03
50GO:0010143: cutin biosynthetic process5.92E-03
51GO:0005985: sucrose metabolic process6.41E-03
52GO:0006636: unsaturated fatty acid biosynthetic process6.91E-03
53GO:0009742: brassinosteroid mediated signaling pathway7.46E-03
54GO:0010017: red or far-red light signaling pathway9.05E-03
55GO:0006284: base-excision repair1.02E-02
56GO:0006633: fatty acid biosynthetic process1.11E-02
57GO:0080022: primary root development1.14E-02
58GO:0015991: ATP hydrolysis coupled proton transport1.14E-02
59GO:0048653: anther development1.14E-02
60GO:0009958: positive gravitropism1.20E-02
61GO:0015986: ATP synthesis coupled proton transport1.26E-02
62GO:0009749: response to glucose1.33E-02
63GO:0009791: post-embryonic development1.33E-02
64GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.39E-02
65GO:0048235: pollen sperm cell differentiation1.46E-02
66GO:1901657: glycosyl compound metabolic process1.53E-02
67GO:0010090: trichome morphogenesis1.53E-02
68GO:0019760: glucosinolate metabolic process1.60E-02
69GO:0016126: sterol biosynthetic process1.81E-02
70GO:0009826: unidimensional cell growth1.82E-02
71GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.88E-02
72GO:0007049: cell cycle2.11E-02
73GO:0016311: dephosphorylation2.11E-02
74GO:0009407: toxin catabolic process2.34E-02
75GO:0010218: response to far red light2.34E-02
76GO:0007568: aging2.42E-02
77GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.43E-02
78GO:0009737: response to abscisic acid2.99E-02
79GO:0010114: response to red light3.10E-02
80GO:0009636: response to toxic substance3.37E-02
81GO:0031347: regulation of defense response3.55E-02
82GO:0009809: lignin biosynthetic process3.83E-02
83GO:0009585: red, far-red light phototransduction3.83E-02
84GO:0051603: proteolysis involved in cellular protein catabolic process3.93E-02
85GO:0009733: response to auxin4.11E-02
86GO:0009740: gibberellic acid mediated signaling pathway4.72E-02
87GO:0042545: cell wall modification4.82E-02
RankGO TermAdjusted P value
1GO:0016413: O-acetyltransferase activity5.95E-06
2GO:0003838: sterol 24-C-methyltransferase activity1.42E-04
3GO:0042389: omega-3 fatty acid desaturase activity3.25E-04
4GO:0004047: aminomethyltransferase activity3.25E-04
5GO:0048531: beta-1,3-galactosyltransferase activity3.25E-04
6GO:0001664: G-protein coupled receptor binding5.33E-04
7GO:0031683: G-protein beta/gamma-subunit complex binding5.33E-04
8GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity6.76E-04
9GO:0001872: (1->3)-beta-D-glucan binding7.63E-04
10GO:0015204: urea transmembrane transporter activity1.01E-03
11GO:0019905: syntaxin binding1.01E-03
12GO:0019901: protein kinase binding1.14E-03
13GO:0016762: xyloglucan:xyloglucosyl transferase activity1.22E-03
14GO:0008725: DNA-3-methyladenine glycosylase activity1.28E-03
15GO:0017137: Rab GTPase binding1.28E-03
16GO:0016759: cellulose synthase activity1.47E-03
17GO:0016722: oxidoreductase activity, oxidizing metal ions1.56E-03
18GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.57E-03
19GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.57E-03
20GO:0015250: water channel activity1.74E-03
21GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.88E-03
22GO:0016798: hydrolase activity, acting on glycosyl bonds2.05E-03
23GO:0016621: cinnamoyl-CoA reductase activity2.21E-03
24GO:0004564: beta-fructofuranosidase activity2.56E-03
25GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.93E-03
26GO:0004575: sucrose alpha-glucosidase activity3.71E-03
27GO:0046961: proton-transporting ATPase activity, rotational mechanism4.55E-03
28GO:0004860: protein kinase inhibitor activity4.55E-03
29GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.05E-03
30GO:0004871: signal transducer activity5.78E-03
31GO:0016757: transferase activity, transferring glycosyl groups6.83E-03
32GO:0016758: transferase activity, transferring hexosyl groups8.58E-03
33GO:0044212: transcription regulatory region DNA binding9.66E-03
34GO:0004872: receptor activity1.33E-02
35GO:0051015: actin filament binding1.53E-02
36GO:0016791: phosphatase activity1.60E-02
37GO:0008483: transaminase activity1.67E-02
38GO:0046982: protein heterodimerization activity1.86E-02
39GO:0102483: scopolin beta-glucosidase activity2.03E-02
40GO:0030247: polysaccharide binding2.03E-02
41GO:0005096: GTPase activator activity2.26E-02
42GO:0004693: cyclin-dependent protein serine/threonine kinase activity2.34E-02
43GO:0008422: beta-glucosidase activity2.76E-02
44GO:0004364: glutathione transferase activity3.01E-02
45GO:0004185: serine-type carboxypeptidase activity3.10E-02
46GO:0051537: 2 iron, 2 sulfur cluster binding3.28E-02
47GO:0016298: lipase activity3.93E-02
48GO:0045330: aspartyl esterase activity4.12E-02
49GO:0004650: polygalacturonase activity4.62E-02
50GO:0030599: pectinesterase activity4.72E-02
51GO:0003779: actin binding4.82E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall5.65E-08
2GO:0005576: extracellular region4.33E-05
3GO:0031225: anchored component of membrane6.42E-05
4GO:0005794: Golgi apparatus1.23E-04
5GO:0009344: nitrite reductase complex [NAD(P)H]1.42E-04
6GO:0048046: apoplast2.24E-04
7GO:0042170: plastid membrane3.25E-04
8GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain3.25E-04
9GO:0046658: anchored component of plasma membrane4.39E-04
10GO:0005775: vacuolar lumen7.63E-04
11GO:0009506: plasmodesma9.88E-04
12GO:0000139: Golgi membrane1.11E-03
13GO:0016021: integral component of membrane1.76E-03
14GO:0042807: central vacuole2.21E-03
15GO:0000786: nucleosome2.74E-03
16GO:0000326: protein storage vacuole2.93E-03
17GO:0005618: cell wall3.02E-03
18GO:0055028: cortical microtubule4.12E-03
19GO:0048471: perinuclear region of cytoplasm4.55E-03
20GO:0030095: chloroplast photosystem II5.92E-03
21GO:0005753: mitochondrial proton-transporting ATP synthase complex6.41E-03
22GO:0009654: photosystem II oxygen evolving complex7.95E-03
23GO:0009543: chloroplast thylakoid lumen8.81E-03
24GO:0005886: plasma membrane1.06E-02
25GO:0019898: extrinsic component of membrane1.33E-02
26GO:0005773: vacuole1.61E-02
27GO:0000325: plant-type vacuole2.42E-02
28GO:0031902: late endosome membrane2.93E-02
29GO:0005834: heterotrimeric G-protein complex4.52E-02
30GO:0005887: integral component of plasma membrane4.68E-02
31GO:0009706: chloroplast inner membrane4.92E-02
Gene type



Gene DE type