Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G42570

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
2GO:0042430: indole-containing compound metabolic process0.00E+00
3GO:0009627: systemic acquired resistance1.01E-06
4GO:0010266: response to vitamin B11.21E-05
5GO:0010618: aerenchyma formation3.21E-05
6GO:0051262: protein tetramerization3.21E-05
7GO:0009915: phloem sucrose loading3.21E-05
8GO:0080026: response to indolebutyric acid3.21E-05
9GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine3.21E-05
10GO:0016045: detection of bacterium5.78E-05
11GO:1900140: regulation of seedling development5.78E-05
12GO:0001666: response to hypoxia7.16E-05
13GO:0048194: Golgi vesicle budding8.79E-05
14GO:0080024: indolebutyric acid metabolic process8.79E-05
15GO:0060548: negative regulation of cell death1.22E-04
16GO:0045727: positive regulation of translation1.22E-04
17GO:0006099: tricarboxylic acid cycle1.32E-04
18GO:0000304: response to singlet oxygen1.59E-04
19GO:0009229: thiamine diphosphate biosynthetic process1.59E-04
20GO:0009228: thiamine biosynthetic process1.98E-04
21GO:0010942: positive regulation of cell death1.98E-04
22GO:0010310: regulation of hydrogen peroxide metabolic process2.39E-04
23GO:0015977: carbon fixation2.39E-04
24GO:0030643: cellular phosphate ion homeostasis2.39E-04
25GO:0010189: vitamin E biosynthetic process2.39E-04
26GO:0006002: fructose 6-phosphate metabolic process3.73E-04
27GO:0022900: electron transport chain3.73E-04
28GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway4.69E-04
29GO:0015706: nitrate transport6.23E-04
30GO:0009266: response to temperature stimulus7.31E-04
31GO:0010053: root epidermal cell differentiation7.88E-04
32GO:0010167: response to nitrate7.88E-04
33GO:0006636: unsaturated fatty acid biosynthetic process8.44E-04
34GO:0010200: response to chitin1.06E-03
35GO:0006891: intra-Golgi vesicle-mediated transport1.61E-03
36GO:0030163: protein catabolic process1.76E-03
37GO:0019760: glucosinolate metabolic process1.83E-03
38GO:0042128: nitrate assimilation2.22E-03
39GO:0016311: dephosphorylation2.38E-03
40GO:0008219: cell death2.46E-03
41GO:0048767: root hair elongation2.55E-03
42GO:0006631: fatty acid metabolic process3.24E-03
43GO:0042542: response to hydrogen peroxide3.33E-03
44GO:0031347: regulation of defense response3.90E-03
45GO:0006096: glycolytic process4.70E-03
46GO:0009626: plant-type hypersensitive response4.91E-03
47GO:0006979: response to oxidative stress5.26E-03
48GO:0009742: brassinosteroid mediated signaling pathway5.56E-03
49GO:0009409: response to cold7.05E-03
50GO:0016036: cellular response to phosphate starvation7.42E-03
51GO:0010150: leaf senescence7.79E-03
52GO:0006468: protein phosphorylation8.38E-03
53GO:0007166: cell surface receptor signaling pathway8.56E-03
54GO:0007275: multicellular organism development1.03E-02
55GO:0048366: leaf development1.19E-02
56GO:0044550: secondary metabolite biosynthetic process1.31E-02
57GO:0015979: photosynthesis1.35E-02
58GO:0006886: intracellular protein transport1.43E-02
59GO:0006508: proteolysis1.61E-02
60GO:0006629: lipid metabolic process1.62E-02
61GO:0009408: response to heat1.62E-02
62GO:0009611: response to wounding2.48E-02
63GO:0035556: intracellular signal transduction2.54E-02
64GO:0071555: cell wall organization4.04E-02
65GO:0042742: defense response to bacterium4.04E-02
66GO:0055114: oxidation-reduction process4.72E-02
67GO:0015031: protein transport4.79E-02
RankGO TermAdjusted P value
1GO:0010176: homogentisate phytyltransferase activity0.00E+00
2GO:0004190: aspartic-type endopeptidase activity1.19E-05
3GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.21E-05
4GO:0080041: ADP-ribose pyrophosphohydrolase activity3.21E-05
5GO:0004338: glucan exo-1,3-beta-glucosidase activity3.21E-05
6GO:0008964: phosphoenolpyruvate carboxylase activity5.78E-05
7GO:0004659: prenyltransferase activity1.22E-04
8GO:0004012: phospholipid-translocating ATPase activity2.39E-04
9GO:0003872: 6-phosphofructokinase activity2.82E-04
10GO:0004714: transmembrane receptor protein tyrosine kinase activity3.27E-04
11GO:0015112: nitrate transmembrane transporter activity4.69E-04
12GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.76E-04
13GO:0042973: glucan endo-1,3-beta-D-glucosidase activity7.31E-04
14GO:0051536: iron-sulfur cluster binding9.02E-04
15GO:0033612: receptor serine/threonine kinase binding1.02E-03
16GO:0008810: cellulase activity1.14E-03
17GO:0016791: phosphatase activity1.83E-03
18GO:0004806: triglyceride lipase activity2.30E-03
19GO:0030247: polysaccharide binding2.30E-03
20GO:0003993: acid phosphatase activity2.97E-03
21GO:0051539: 4 iron, 4 sulfur cluster binding3.15E-03
22GO:0016298: lipase activity4.30E-03
23GO:0004674: protein serine/threonine kinase activity4.72E-03
24GO:0016746: transferase activity, transferring acyl groups5.45E-03
25GO:0016829: lyase activity6.58E-03
26GO:0016491: oxidoreductase activity6.86E-03
27GO:0008565: protein transporter activity7.06E-03
28GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.42E-03
29GO:0004672: protein kinase activity7.65E-03
30GO:0000287: magnesium ion binding1.04E-02
31GO:0004601: peroxidase activity1.06E-02
32GO:0004497: monooxygenase activity1.23E-02
33GO:0004871: signal transducer activity1.45E-02
34GO:0042803: protein homodimerization activity1.45E-02
35GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.48E-02
36GO:0004722: protein serine/threonine phosphatase activity1.49E-02
37GO:0005524: ATP binding1.88E-02
38GO:0016301: kinase activity2.24E-02
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.98E-02
40GO:0019825: oxygen binding3.14E-02
41GO:0005506: iron ion binding3.99E-02
42GO:0044212: transcription regulatory region DNA binding4.04E-02
43GO:0003824: catalytic activity4.32E-02
RankGO TermAdjusted P value
1GO:0045252: oxoglutarate dehydrogenase complex1.21E-05
2GO:0005945: 6-phosphofructokinase complex1.59E-04
3GO:0009986: cell surface2.82E-04
4GO:0005795: Golgi stack7.88E-04
5GO:0005777: peroxisome2.98E-03
6GO:0048046: apoplast3.22E-03
7GO:0005747: mitochondrial respiratory chain complex I4.81E-03
8GO:0005783: endoplasmic reticulum7.36E-03
9GO:0005886: plasma membrane8.05E-03
10GO:0046658: anchored component of plasma membrane9.48E-03
11GO:0031969: chloroplast membrane1.23E-02
12GO:0022626: cytosolic ribosome2.37E-02
13GO:0016021: integral component of membrane2.90E-02
14GO:0031225: anchored component of membrane3.35E-02
15GO:0009507: chloroplast3.38E-02
16GO:0005802: trans-Golgi network3.42E-02
17GO:0005622: intracellular3.68E-02
18GO:0009536: plastid4.67E-02
Gene type



Gene DE type