GO Enrichment Analysis of Co-expressed Genes with
AT5G42150
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 2 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 3 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 4 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.79E-07 |
| 5 | GO:0006099: tricarboxylic acid cycle | 1.43E-06 |
| 6 | GO:0006805: xenobiotic metabolic process | 5.48E-05 |
| 7 | GO:0019567: arabinose biosynthetic process | 5.48E-05 |
| 8 | GO:0033306: phytol metabolic process | 5.48E-05 |
| 9 | GO:0046686: response to cadmium ion | 9.49E-05 |
| 10 | GO:0045454: cell redox homeostasis | 1.33E-04 |
| 11 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.34E-04 |
| 12 | GO:0008535: respiratory chain complex IV assembly | 1.34E-04 |
| 13 | GO:0010220: positive regulation of vernalization response | 1.34E-04 |
| 14 | GO:0006591: ornithine metabolic process | 2.28E-04 |
| 15 | GO:0080055: low-affinity nitrate transport | 2.28E-04 |
| 16 | GO:0071494: cellular response to UV-C | 2.28E-04 |
| 17 | GO:0007276: gamete generation | 3.33E-04 |
| 18 | GO:0001676: long-chain fatty acid metabolic process | 3.33E-04 |
| 19 | GO:0033617: mitochondrial respiratory chain complex IV assembly | 3.33E-04 |
| 20 | GO:0030163: protein catabolic process | 4.10E-04 |
| 21 | GO:0033358: UDP-L-arabinose biosynthetic process | 4.45E-04 |
| 22 | GO:0000460: maturation of 5.8S rRNA | 4.45E-04 |
| 23 | GO:0006878: cellular copper ion homeostasis | 4.45E-04 |
| 24 | GO:0045227: capsule polysaccharide biosynthetic process | 4.45E-04 |
| 25 | GO:0000470: maturation of LSU-rRNA | 6.92E-04 |
| 26 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 6.92E-04 |
| 27 | GO:0010405: arabinogalactan protein metabolic process | 6.92E-04 |
| 28 | GO:0006751: glutathione catabolic process | 6.92E-04 |
| 29 | GO:0042026: protein refolding | 8.25E-04 |
| 30 | GO:0006458: 'de novo' protein folding | 8.25E-04 |
| 31 | GO:1900056: negative regulation of leaf senescence | 9.62E-04 |
| 32 | GO:0009819: drought recovery | 1.11E-03 |
| 33 | GO:0050821: protein stabilization | 1.11E-03 |
| 34 | GO:0006102: isocitrate metabolic process | 1.11E-03 |
| 35 | GO:0009636: response to toxic substance | 1.19E-03 |
| 36 | GO:0006526: arginine biosynthetic process | 1.26E-03 |
| 37 | GO:0009699: phenylpropanoid biosynthetic process | 1.26E-03 |
| 38 | GO:0046685: response to arsenic-containing substance | 1.41E-03 |
| 39 | GO:0019432: triglyceride biosynthetic process | 1.41E-03 |
| 40 | GO:0006486: protein glycosylation | 1.42E-03 |
| 41 | GO:0043067: regulation of programmed cell death | 1.58E-03 |
| 42 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.58E-03 |
| 43 | GO:0010582: floral meristem determinacy | 2.11E-03 |
| 44 | GO:0015706: nitrate transport | 2.11E-03 |
| 45 | GO:0006807: nitrogen compound metabolic process | 2.30E-03 |
| 46 | GO:0009225: nucleotide-sugar metabolic process | 2.70E-03 |
| 47 | GO:0046688: response to copper ion | 2.70E-03 |
| 48 | GO:0034976: response to endoplasmic reticulum stress | 2.90E-03 |
| 49 | GO:0009790: embryo development | 2.90E-03 |
| 50 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.11E-03 |
| 51 | GO:0006487: protein N-linked glycosylation | 3.11E-03 |
| 52 | GO:0006825: copper ion transport | 3.32E-03 |
| 53 | GO:0051302: regulation of cell division | 3.32E-03 |
| 54 | GO:0061077: chaperone-mediated protein folding | 3.54E-03 |
| 55 | GO:0007005: mitochondrion organization | 3.77E-03 |
| 56 | GO:0006012: galactose metabolic process | 4.00E-03 |
| 57 | GO:0009617: response to bacterium | 4.08E-03 |
| 58 | GO:0006520: cellular amino acid metabolic process | 4.96E-03 |
| 59 | GO:0010193: response to ozone | 5.74E-03 |
| 60 | GO:0031047: gene silencing by RNA | 6.00E-03 |
| 61 | GO:0006979: response to oxidative stress | 7.19E-03 |
| 62 | GO:0042128: nitrate assimilation | 7.99E-03 |
| 63 | GO:0006974: cellular response to DNA damage stimulus | 7.99E-03 |
| 64 | GO:0009832: plant-type cell wall biogenesis | 9.22E-03 |
| 65 | GO:0009407: toxin catabolic process | 9.54E-03 |
| 66 | GO:0010043: response to zinc ion | 9.86E-03 |
| 67 | GO:0009853: photorespiration | 1.05E-02 |
| 68 | GO:0006631: fatty acid metabolic process | 1.19E-02 |
| 69 | GO:0006857: oligopeptide transport | 1.63E-02 |
| 70 | GO:0009909: regulation of flower development | 1.67E-02 |
| 71 | GO:0006096: glycolytic process | 1.75E-02 |
| 72 | GO:0048316: seed development | 1.79E-02 |
| 73 | GO:0009737: response to abscisic acid | 1.86E-02 |
| 74 | GO:0016569: covalent chromatin modification | 1.91E-02 |
| 75 | GO:0006457: protein folding | 2.23E-02 |
| 76 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.34E-02 |
| 77 | GO:0009058: biosynthetic process | 2.43E-02 |
| 78 | GO:0009845: seed germination | 2.47E-02 |
| 79 | GO:0010150: leaf senescence | 2.94E-02 |
| 80 | GO:0009651: response to salt stress | 3.28E-02 |
| 81 | GO:0009414: response to water deprivation | 3.40E-02 |
| 82 | GO:0055114: oxidation-reduction process | 3.76E-02 |
| 83 | GO:0009409: response to cold | 4.69E-02 |
| 84 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.79E-02 |
| 85 | GO:0046777: protein autophosphorylation | 4.90E-02 |
| 86 | GO:0044550: secondary metabolite biosynthetic process | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004585: ornithine carbamoyltransferase activity | 0.00E+00 |
| 2 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 3 | GO:0005507: copper ion binding | 4.06E-08 |
| 4 | GO:0043021: ribonucleoprotein complex binding | 1.79E-07 |
| 5 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 8.37E-06 |
| 6 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.36E-05 |
| 7 | GO:0008802: betaine-aldehyde dehydrogenase activity | 5.48E-05 |
| 8 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 5.48E-05 |
| 9 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 5.48E-05 |
| 10 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.34E-04 |
| 11 | GO:0016743: carboxyl- or carbamoyltransferase activity | 1.34E-04 |
| 12 | GO:0048531: beta-1,3-galactosyltransferase activity | 1.34E-04 |
| 13 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 1.34E-04 |
| 14 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.34E-04 |
| 15 | GO:0004634: phosphopyruvate hydratase activity | 1.34E-04 |
| 16 | GO:0016531: copper chaperone activity | 2.28E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.28E-04 |
| 18 | GO:0003840: gamma-glutamyltransferase activity | 2.28E-04 |
| 19 | GO:0036374: glutathione hydrolase activity | 2.28E-04 |
| 20 | GO:0008469: histone-arginine N-methyltransferase activity | 2.28E-04 |
| 21 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.28E-04 |
| 22 | GO:0008276: protein methyltransferase activity | 3.33E-04 |
| 23 | GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity | 3.33E-04 |
| 24 | GO:0050373: UDP-arabinose 4-epimerase activity | 4.45E-04 |
| 25 | GO:0000166: nucleotide binding | 4.78E-04 |
| 26 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.66E-04 |
| 27 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 6.92E-04 |
| 28 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 6.92E-04 |
| 29 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 6.92E-04 |
| 30 | GO:0008200: ion channel inhibitor activity | 6.92E-04 |
| 31 | GO:0030976: thiamine pyrophosphate binding | 6.92E-04 |
| 32 | GO:0050897: cobalt ion binding | 7.69E-04 |
| 33 | GO:0102391: decanoate--CoA ligase activity | 8.25E-04 |
| 34 | GO:0003978: UDP-glucose 4-epimerase activity | 8.25E-04 |
| 35 | GO:0004144: diacylglycerol O-acyltransferase activity | 8.25E-04 |
| 36 | GO:0051920: peroxiredoxin activity | 8.25E-04 |
| 37 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 9.62E-04 |
| 38 | GO:0043295: glutathione binding | 9.62E-04 |
| 39 | GO:0004467: long-chain fatty acid-CoA ligase activity | 9.62E-04 |
| 40 | GO:0016209: antioxidant activity | 1.11E-03 |
| 41 | GO:0004129: cytochrome-c oxidase activity | 1.93E-03 |
| 42 | GO:0001054: RNA polymerase I activity | 1.93E-03 |
| 43 | GO:0044183: protein binding involved in protein folding | 1.93E-03 |
| 44 | GO:0016746: transferase activity, transferring acyl groups | 2.06E-03 |
| 45 | GO:0008378: galactosyltransferase activity | 2.11E-03 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.30E-03 |
| 47 | GO:0004867: serine-type endopeptidase inhibitor activity | 2.70E-03 |
| 48 | GO:0004298: threonine-type endopeptidase activity | 3.54E-03 |
| 49 | GO:0003756: protein disulfide isomerase activity | 4.23E-03 |
| 50 | GO:0000287: magnesium ion binding | 5.18E-03 |
| 51 | GO:0050662: coenzyme binding | 5.22E-03 |
| 52 | GO:0008233: peptidase activity | 6.43E-03 |
| 53 | GO:0008237: metallopeptidase activity | 6.83E-03 |
| 54 | GO:0016597: amino acid binding | 7.11E-03 |
| 55 | GO:0003697: single-stranded DNA binding | 1.05E-02 |
| 56 | GO:0004364: glutathione transferase activity | 1.22E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.33E-02 |
| 58 | GO:0015293: symporter activity | 1.37E-02 |
| 59 | GO:0051287: NAD binding | 1.44E-02 |
| 60 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 61 | GO:0051082: unfolded protein binding | 1.99E-02 |
| 62 | GO:0004386: helicase activity | 2.12E-02 |
| 63 | GO:0016758: transferase activity, transferring hexosyl groups | 2.29E-02 |
| 64 | GO:0030170: pyridoxal phosphate binding | 2.52E-02 |
| 65 | GO:0003824: catalytic activity | 3.82E-02 |
| 66 | GO:0008168: methyltransferase activity | 3.91E-02 |
| 67 | GO:0004601: peroxidase activity | 4.01E-02 |
| 68 | GO:0050660: flavin adenine dinucleotide binding | 4.45E-02 |
| 69 | GO:0004497: monooxygenase activity | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0070545: PeBoW complex | 1.79E-07 |
| 3 | GO:0030687: preribosome, large subunit precursor | 1.67E-05 |
| 4 | GO:0045252: oxoglutarate dehydrogenase complex | 5.48E-05 |
| 5 | GO:0000015: phosphopyruvate hydratase complex | 1.34E-04 |
| 6 | GO:0005759: mitochondrial matrix | 3.43E-04 |
| 7 | GO:0005746: mitochondrial respiratory chain | 5.66E-04 |
| 8 | GO:0008250: oligosaccharyltransferase complex | 5.66E-04 |
| 9 | GO:0005739: mitochondrion | 7.18E-04 |
| 10 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.53E-04 |
| 11 | GO:0016272: prefoldin complex | 8.25E-04 |
| 12 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.11E-03 |
| 13 | GO:0045273: respiratory chain complex II | 1.11E-03 |
| 14 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.26E-03 |
| 15 | GO:0000326: protein storage vacuole | 1.26E-03 |
| 16 | GO:0005736: DNA-directed RNA polymerase I complex | 1.41E-03 |
| 17 | GO:0000502: proteasome complex | 1.42E-03 |
| 18 | GO:0005829: cytosol | 1.54E-03 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 1.72E-03 |
| 20 | GO:0005740: mitochondrial envelope | 1.75E-03 |
| 21 | GO:0005834: heterotrimeric G-protein complex | 1.78E-03 |
| 22 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.93E-03 |
| 23 | GO:0005750: mitochondrial respiratory chain complex III | 2.49E-03 |
| 24 | GO:0005758: mitochondrial intermembrane space | 3.11E-03 |
| 25 | GO:0045271: respiratory chain complex I | 3.32E-03 |
| 26 | GO:0005777: peroxisome | 3.47E-03 |
| 27 | GO:0005839: proteasome core complex | 3.54E-03 |
| 28 | GO:0005741: mitochondrial outer membrane | 3.54E-03 |
| 29 | GO:0032580: Golgi cisterna membrane | 6.55E-03 |
| 30 | GO:0005788: endoplasmic reticulum lumen | 7.69E-03 |
| 31 | GO:0005774: vacuolar membrane | 9.05E-03 |
| 32 | GO:0005794: Golgi apparatus | 1.38E-02 |
| 33 | GO:0005730: nucleolus | 1.39E-02 |
| 34 | GO:0031966: mitochondrial membrane | 1.48E-02 |
| 35 | GO:0009507: chloroplast | 1.54E-02 |
| 36 | GO:0005886: plasma membrane | 1.61E-02 |
| 37 | GO:0005773: vacuole | 1.72E-02 |
| 38 | GO:0016020: membrane | 1.95E-02 |
| 39 | GO:0010287: plastoglobule | 2.25E-02 |
| 40 | GO:0005654: nucleoplasm | 2.29E-02 |
| 41 | GO:0009506: plasmodesma | 2.31E-02 |
| 42 | GO:0048046: apoplast | 3.62E-02 |
| 43 | GO:0009505: plant-type cell wall | 4.35E-02 |
| 44 | GO:0000139: Golgi membrane | 4.69E-02 |