Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G41400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
2GO:0019673: GDP-mannose metabolic process4.45E-05
3GO:0007584: response to nutrient1.10E-04
4GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine1.10E-04
5GO:0015783: GDP-fucose transport1.89E-04
6GO:1900055: regulation of leaf senescence1.89E-04
7GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.89E-04
8GO:0048544: recognition of pollen2.39E-04
9GO:0048194: Golgi vesicle budding2.78E-04
10GO:0006542: glutamine biosynthetic process3.73E-04
11GO:0010107: potassium ion import3.73E-04
12GO:0030041: actin filament polymerization4.75E-04
13GO:0006099: tricarboxylic acid cycle6.78E-04
14GO:0009094: L-phenylalanine biosynthetic process6.94E-04
15GO:0006102: isocitrate metabolic process9.32E-04
16GO:0015780: nucleotide-sugar transport1.19E-03
17GO:0006096: glycolytic process1.29E-03
18GO:0006995: cellular response to nitrogen starvation1.47E-03
19GO:0030148: sphingolipid biosynthetic process1.61E-03
20GO:0010105: negative regulation of ethylene-activated signaling pathway1.77E-03
21GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.92E-03
22GO:0000162: tryptophan biosynthetic process2.42E-03
23GO:2000377: regulation of reactive oxygen species metabolic process2.60E-03
24GO:0006874: cellular calcium ion homeostasis2.77E-03
25GO:0006012: galactose metabolic process3.33E-03
26GO:0010118: stomatal movement3.93E-03
27GO:0046777: protein autophosphorylation5.35E-03
28GO:0009607: response to biotic stimulus6.39E-03
29GO:0042128: nitrate assimilation6.64E-03
30GO:0008219: cell death7.39E-03
31GO:0006499: N-terminal protein myristoylation7.91E-03
32GO:0000209: protein polyubiquitination1.07E-02
33GO:0008643: carbohydrate transport1.10E-02
34GO:0006855: drug transmembrane transport1.16E-02
35GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.19E-02
36GO:0006952: defense response1.22E-02
37GO:0048367: shoot system development1.48E-02
38GO:0016310: phosphorylation1.58E-02
39GO:0010150: leaf senescence2.43E-02
40GO:0007166: cell surface receptor signaling pathway2.68E-02
41GO:0009826: unidimensional cell growth3.23E-02
42GO:0044550: secondary metabolite biosynthetic process4.11E-02
43GO:0046686: response to cadmium ion4.14E-02
44GO:0016042: lipid catabolic process5.00E-02
RankGO TermAdjusted P value
1GO:0015370: solute:sodium symporter activity0.00E+00
2GO:0005548: phospholipid transporter activity0.00E+00
3GO:0004012: phospholipid-translocating ATPase activity2.94E-08
4GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism6.60E-07
5GO:0000287: magnesium ion binding1.63E-06
6GO:0004743: pyruvate kinase activity3.18E-05
7GO:0030955: potassium ion binding3.18E-05
8GO:0004425: indole-3-glycerol-phosphate synthase activity4.45E-05
9GO:0008446: GDP-mannose 4,6-dehydratase activity4.45E-05
10GO:0019707: protein-cysteine S-acyltransferase activity4.45E-05
11GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.45E-05
12GO:0038199: ethylene receptor activity1.10E-04
13GO:0045140: inositol phosphoceramide synthase activity1.10E-04
14GO:0016301: kinase activity1.77E-04
15GO:0005457: GDP-fucose transmembrane transporter activity1.89E-04
16GO:0005524: ATP binding2.40E-04
17GO:0051740: ethylene binding2.78E-04
18GO:0004449: isocitrate dehydrogenase (NAD+) activity2.78E-04
19GO:0047769: arogenate dehydratase activity3.73E-04
20GO:0004664: prephenate dehydratase activity3.73E-04
21GO:0015204: urea transmembrane transporter activity3.73E-04
22GO:0004356: glutamate-ammonia ligase activity4.75E-04
23GO:0004723: calcium-dependent protein serine/threonine phosphatase activity6.94E-04
24GO:0004034: aldose 1-epimerase activity9.32E-04
25GO:0005267: potassium channel activity1.06E-03
26GO:0004673: protein histidine kinase activity1.47E-03
27GO:0000155: phosphorelay sensor kinase activity1.92E-03
28GO:0031624: ubiquitin conjugating enzyme binding2.09E-03
29GO:0005217: intracellular ligand-gated ion channel activity2.25E-03
30GO:0004970: ionotropic glutamate receptor activity2.25E-03
31GO:0015297: antiporter activity2.51E-03
32GO:0004674: protein serine/threonine kinase activity2.59E-03
33GO:0003954: NADH dehydrogenase activity2.60E-03
34GO:0019706: protein-cysteine S-palmitoyltransferase activity2.96E-03
35GO:0030246: carbohydrate binding3.01E-03
36GO:0001085: RNA polymerase II transcription factor binding4.14E-03
37GO:0016853: isomerase activity4.35E-03
38GO:0004872: receptor activity4.56E-03
39GO:0016597: amino acid binding5.91E-03
40GO:0015238: drug transmembrane transporter activity7.65E-03
41GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding8.18E-03
42GO:0015293: symporter activity1.13E-02
43GO:0045735: nutrient reservoir activity1.45E-02
44GO:0003779: actin binding1.61E-02
45GO:0016746: transferase activity, transferring acyl groups1.68E-02
46GO:0005507: copper ion binding1.87E-02
47GO:0019825: oxygen binding1.87E-02
48GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.97E-02
49GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.12E-02
50GO:0005525: GTP binding2.16E-02
51GO:0005506: iron ion binding2.62E-02
52GO:0003682: chromatin binding3.45E-02
53GO:0050660: flavin adenine dinucleotide binding3.68E-02
54GO:0004497: monooxygenase activity3.87E-02
55GO:0061630: ubiquitin protein ligase activity4.01E-02
56GO:0020037: heme binding4.19E-02
57GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.65E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane3.30E-08
2GO:0005911: cell-cell junction4.45E-05
3GO:0045252: oxoglutarate dehydrogenase complex4.45E-05
4GO:0000138: Golgi trans cisterna4.45E-05
5GO:0031304: intrinsic component of mitochondrial inner membrane1.10E-04
6GO:0016021: integral component of membrane1.57E-04
7GO:0005802: trans-Golgi network6.47E-04
8GO:0090404: pollen tube tip1.61E-03
9GO:0005789: endoplasmic reticulum membrane1.73E-03
10GO:0005769: early endosome2.42E-03
11GO:0005794: Golgi apparatus2.54E-03
12GO:0005783: endoplasmic reticulum4.78E-03
13GO:0005667: transcription factor complex6.64E-03
14GO:0000151: ubiquitin ligase complex7.39E-03
15GO:0031902: late endosome membrane9.83E-03
16GO:0005829: cytosol1.28E-02
17GO:0005747: mitochondrial respiratory chain complex I1.48E-02
18GO:0005768: endosome2.40E-02
19GO:0000139: Golgi membrane3.60E-02
Gene type



Gene DE type