GO Enrichment Analysis of Co-expressed Genes with
AT5G40770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0071433: cell wall repair | 0.00E+00 |
| 4 | GO:0006412: translation | 1.86E-26 |
| 5 | GO:0042254: ribosome biogenesis | 5.97E-10 |
| 6 | GO:0000027: ribosomal large subunit assembly | 5.82E-08 |
| 7 | GO:0061077: chaperone-mediated protein folding | 9.28E-08 |
| 8 | GO:0006458: 'de novo' protein folding | 1.10E-07 |
| 9 | GO:0045041: protein import into mitochondrial intermembrane space | 3.31E-07 |
| 10 | GO:0046686: response to cadmium ion | 4.46E-07 |
| 11 | GO:0002181: cytoplasmic translation | 1.27E-06 |
| 12 | GO:0006626: protein targeting to mitochondrion | 2.38E-06 |
| 13 | GO:0051131: chaperone-mediated protein complex assembly | 3.03E-06 |
| 14 | GO:0009735: response to cytokinin | 1.27E-05 |
| 15 | GO:0016444: somatic cell DNA recombination | 2.12E-05 |
| 16 | GO:0042026: protein refolding | 2.12E-05 |
| 17 | GO:0006457: protein folding | 3.25E-05 |
| 18 | GO:1990542: mitochondrial transmembrane transport | 7.75E-05 |
| 19 | GO:0000494: box C/D snoRNA 3'-end processing | 7.75E-05 |
| 20 | GO:0006900: membrane budding | 7.75E-05 |
| 21 | GO:1990258: histone glutamine methylation | 7.75E-05 |
| 22 | GO:0006820: anion transport | 1.22E-04 |
| 23 | GO:0010220: positive regulation of vernalization response | 1.85E-04 |
| 24 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 1.85E-04 |
| 25 | GO:0006364: rRNA processing | 2.14E-04 |
| 26 | GO:0030150: protein import into mitochondrial matrix | 2.27E-04 |
| 27 | GO:0006334: nucleosome assembly | 2.78E-04 |
| 28 | GO:0007005: mitochondrion organization | 3.05E-04 |
| 29 | GO:0006954: inflammatory response | 3.11E-04 |
| 30 | GO:1902626: assembly of large subunit precursor of preribosome | 3.11E-04 |
| 31 | GO:0045039: protein import into mitochondrial inner membrane | 3.11E-04 |
| 32 | GO:0006591: ornithine metabolic process | 3.11E-04 |
| 33 | GO:0055074: calcium ion homeostasis | 3.11E-04 |
| 34 | GO:0009294: DNA mediated transformation | 3.33E-04 |
| 35 | GO:0009408: response to heat | 4.00E-04 |
| 36 | GO:0006520: cellular amino acid metabolic process | 4.57E-04 |
| 37 | GO:0044205: 'de novo' UMP biosynthetic process | 5.98E-04 |
| 38 | GO:0010286: heat acclimation | 7.15E-04 |
| 39 | GO:0071493: cellular response to UV-B | 7.57E-04 |
| 40 | GO:0031167: rRNA methylation | 7.57E-04 |
| 41 | GO:0009955: adaxial/abaxial pattern specification | 1.10E-03 |
| 42 | GO:0000724: double-strand break repair via homologous recombination | 1.23E-03 |
| 43 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.29E-03 |
| 44 | GO:0006605: protein targeting | 1.48E-03 |
| 45 | GO:0050821: protein stabilization | 1.48E-03 |
| 46 | GO:0008283: cell proliferation | 1.65E-03 |
| 47 | GO:0006526: arginine biosynthetic process | 1.69E-03 |
| 48 | GO:0001510: RNA methylation | 1.69E-03 |
| 49 | GO:0098656: anion transmembrane transport | 1.91E-03 |
| 50 | GO:0000387: spliceosomal snRNP assembly | 2.14E-03 |
| 51 | GO:0090332: stomatal closure | 2.14E-03 |
| 52 | GO:0010162: seed dormancy process | 2.37E-03 |
| 53 | GO:0048467: gynoecium development | 3.38E-03 |
| 54 | GO:0006541: glutamine metabolic process | 3.38E-03 |
| 55 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.23E-03 |
| 56 | GO:0010187: negative regulation of seed germination | 4.23E-03 |
| 57 | GO:0009651: response to salt stress | 4.82E-03 |
| 58 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.13E-03 |
| 59 | GO:0051028: mRNA transport | 6.10E-03 |
| 60 | GO:0008033: tRNA processing | 6.44E-03 |
| 61 | GO:0010501: RNA secondary structure unwinding | 6.44E-03 |
| 62 | GO:0000413: protein peptidyl-prolyl isomerization | 6.44E-03 |
| 63 | GO:0010197: polar nucleus fusion | 6.78E-03 |
| 64 | GO:0080156: mitochondrial mRNA modification | 7.85E-03 |
| 65 | GO:0032502: developmental process | 8.22E-03 |
| 66 | GO:0009793: embryo development ending in seed dormancy | 9.86E-03 |
| 67 | GO:0009816: defense response to bacterium, incompatible interaction | 1.06E-02 |
| 68 | GO:0010311: lateral root formation | 1.27E-02 |
| 69 | GO:0006811: ion transport | 1.31E-02 |
| 70 | GO:0010043: response to zinc ion | 1.36E-02 |
| 71 | GO:0009853: photorespiration | 1.45E-02 |
| 72 | GO:0015031: protein transport | 1.72E-02 |
| 73 | GO:0000154: rRNA modification | 1.88E-02 |
| 74 | GO:0009965: leaf morphogenesis | 1.88E-02 |
| 75 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.98E-02 |
| 76 | GO:0009909: regulation of flower development | 2.30E-02 |
| 77 | GO:0016569: covalent chromatin modification | 2.64E-02 |
| 78 | GO:0000398: mRNA splicing, via spliceosome | 3.05E-02 |
| 79 | GO:0016036: cellular response to phosphate starvation | 3.86E-02 |
| 80 | GO:0006414: translational elongation | 4.03E-02 |
| 81 | GO:0009451: RNA modification | 4.13E-02 |
| 82 | GO:0009617: response to bacterium | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 2 | GO:0004070: aspartate carbamoyltransferase activity | 0.00E+00 |
| 3 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 4 | GO:0004585: ornithine carbamoyltransferase activity | 0.00E+00 |
| 5 | GO:0003735: structural constituent of ribosome | 1.65E-33 |
| 6 | GO:0003729: mRNA binding | 5.13E-12 |
| 7 | GO:0051082: unfolded protein binding | 4.93E-10 |
| 8 | GO:0016743: carboxyl- or carbamoyltransferase activity | 3.31E-07 |
| 9 | GO:0044183: protein binding involved in protein folding | 1.46E-06 |
| 10 | GO:0030515: snoRNA binding | 2.90E-05 |
| 11 | GO:0015288: porin activity | 3.81E-05 |
| 12 | GO:0008308: voltage-gated anion channel activity | 4.85E-05 |
| 13 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.84E-05 |
| 14 | GO:1990259: histone-glutamine methyltransferase activity | 7.75E-05 |
| 15 | GO:0003746: translation elongation factor activity | 9.75E-05 |
| 16 | GO:0003723: RNA binding | 1.75E-04 |
| 17 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.85E-04 |
| 18 | GO:0005507: copper ion binding | 3.07E-04 |
| 19 | GO:0008649: rRNA methyltransferase activity | 3.11E-04 |
| 20 | GO:0070180: large ribosomal subunit rRNA binding | 3.11E-04 |
| 21 | GO:0008469: histone-arginine N-methyltransferase activity | 3.11E-04 |
| 22 | GO:0008097: 5S rRNA binding | 4.49E-04 |
| 23 | GO:0017077: oxidative phosphorylation uncoupler activity | 4.49E-04 |
| 24 | GO:0008276: protein methyltransferase activity | 4.49E-04 |
| 25 | GO:0019843: rRNA binding | 4.59E-04 |
| 26 | GO:0016597: amino acid binding | 7.57E-04 |
| 27 | GO:0016462: pyrophosphatase activity | 9.24E-04 |
| 28 | GO:0042393: histone binding | 1.46E-03 |
| 29 | GO:0008135: translation factor activity, RNA binding | 1.69E-03 |
| 30 | GO:0015266: protein channel activity | 3.12E-03 |
| 31 | GO:0004407: histone deacetylase activity | 4.23E-03 |
| 32 | GO:0051087: chaperone binding | 4.52E-03 |
| 33 | GO:0005515: protein binding | 8.51E-03 |
| 34 | GO:0004004: ATP-dependent RNA helicase activity | 1.14E-02 |
| 35 | GO:0050897: cobalt ion binding | 1.36E-02 |
| 36 | GO:0003697: single-stranded DNA binding | 1.45E-02 |
| 37 | GO:0003924: GTPase activity | 1.52E-02 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.93E-02 |
| 39 | GO:0000166: nucleotide binding | 2.71E-02 |
| 40 | GO:0008026: ATP-dependent helicase activity | 2.87E-02 |
| 41 | GO:0005524: ATP binding | 3.52E-02 |
| 42 | GO:0008565: protein transporter activity | 3.67E-02 |
| 43 | GO:0005525: GTP binding | 4.44E-02 |
| 44 | GO:0042802: identical protein binding | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043186: P granule | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 4 | GO:0022625: cytosolic large ribosomal subunit | 1.02E-30 |
| 5 | GO:0022626: cytosolic ribosome | 1.55E-30 |
| 6 | GO:0005730: nucleolus | 5.67E-20 |
| 7 | GO:0005829: cytosol | 8.41E-19 |
| 8 | GO:0005840: ribosome | 8.99E-19 |
| 9 | GO:0005774: vacuolar membrane | 1.43E-14 |
| 10 | GO:0015934: large ribosomal subunit | 1.20E-13 |
| 11 | GO:0005737: cytoplasm | 7.94E-11 |
| 12 | GO:0009506: plasmodesma | 3.95E-09 |
| 13 | GO:0005773: vacuole | 1.04E-06 |
| 14 | GO:0022627: cytosolic small ribosomal subunit | 7.44E-06 |
| 15 | GO:0031428: box C/D snoRNP complex | 1.48E-05 |
| 16 | GO:0016020: membrane | 2.73E-05 |
| 17 | GO:0005739: mitochondrion | 4.15E-05 |
| 18 | GO:0046930: pore complex | 4.85E-05 |
| 19 | GO:0005742: mitochondrial outer membrane translocase complex | 4.85E-05 |
| 20 | GO:0005759: mitochondrial matrix | 5.66E-05 |
| 21 | GO:0001405: presequence translocase-associated import motor | 7.75E-05 |
| 22 | GO:0032040: small-subunit processome | 1.22E-04 |
| 23 | GO:0005758: mitochondrial intermembrane space | 2.27E-04 |
| 24 | GO:0005741: mitochondrial outer membrane | 2.78E-04 |
| 25 | GO:0034719: SMN-Sm protein complex | 3.11E-04 |
| 26 | GO:0005743: mitochondrial inner membrane | 3.57E-04 |
| 27 | GO:0005618: cell wall | 4.82E-04 |
| 28 | GO:0005682: U5 snRNP | 5.98E-04 |
| 29 | GO:0005687: U4 snRNP | 7.57E-04 |
| 30 | GO:0097526: spliceosomal tri-snRNP complex | 7.57E-04 |
| 31 | GO:0005788: endoplasmic reticulum lumen | 8.43E-04 |
| 32 | GO:0005689: U12-type spliceosomal complex | 1.10E-03 |
| 33 | GO:0005762: mitochondrial large ribosomal subunit | 1.10E-03 |
| 34 | GO:0071004: U2-type prespliceosome | 1.48E-03 |
| 35 | GO:0005685: U1 snRNP | 1.91E-03 |
| 36 | GO:0071011: precatalytic spliceosome | 2.14E-03 |
| 37 | GO:0015030: Cajal body | 2.14E-03 |
| 38 | GO:0005635: nuclear envelope | 2.36E-03 |
| 39 | GO:0005686: U2 snRNP | 2.37E-03 |
| 40 | GO:0071013: catalytic step 2 spliceosome | 2.61E-03 |
| 41 | GO:0019013: viral nucleocapsid | 3.12E-03 |
| 42 | GO:0009507: chloroplast | 3.31E-03 |
| 43 | GO:0015935: small ribosomal subunit | 4.82E-03 |
| 44 | GO:0016592: mediator complex | 8.22E-03 |
| 45 | GO:0005622: intracellular | 1.08E-02 |
| 46 | GO:0005886: plasma membrane | 1.14E-02 |
| 47 | GO:0005643: nuclear pore | 1.22E-02 |
| 48 | GO:0005783: endoplasmic reticulum | 1.71E-02 |
| 49 | GO:0005681: spliceosomal complex | 2.41E-02 |
| 50 | GO:0005747: mitochondrial respiratory chain complex I | 2.47E-02 |
| 51 | GO:0005834: heterotrimeric G-protein complex | 2.52E-02 |
| 52 | GO:0009941: chloroplast envelope | 2.84E-02 |
| 53 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.93E-02 |
| 54 | GO:0005623: cell | 3.29E-02 |