GO Enrichment Analysis of Co-expressed Genes with
AT5G40150
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 5 | GO:0032544: plastid translation | 3.00E-07 |
| 6 | GO:0009658: chloroplast organization | 6.92E-06 |
| 7 | GO:0010027: thylakoid membrane organization | 3.40E-05 |
| 8 | GO:0009443: pyridoxal 5'-phosphate salvage | 6.74E-05 |
| 9 | GO:0033481: galacturonate biosynthetic process | 6.74E-05 |
| 10 | GO:0043686: co-translational protein modification | 6.74E-05 |
| 11 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 6.74E-05 |
| 12 | GO:0006415: translational termination | 8.50E-05 |
| 13 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.62E-04 |
| 14 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.62E-04 |
| 15 | GO:0015979: photosynthesis | 1.95E-04 |
| 16 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.09E-04 |
| 17 | GO:0006000: fructose metabolic process | 2.75E-04 |
| 18 | GO:0006518: peptide metabolic process | 2.75E-04 |
| 19 | GO:0006696: ergosterol biosynthetic process | 2.75E-04 |
| 20 | GO:0042742: defense response to bacterium | 4.17E-04 |
| 21 | GO:0045727: positive regulation of translation | 5.32E-04 |
| 22 | GO:0015994: chlorophyll metabolic process | 5.32E-04 |
| 23 | GO:2000122: negative regulation of stomatal complex development | 5.32E-04 |
| 24 | GO:0010021: amylopectin biosynthetic process | 5.32E-04 |
| 25 | GO:0010037: response to carbon dioxide | 5.32E-04 |
| 26 | GO:0015976: carbon utilization | 5.32E-04 |
| 27 | GO:0006564: L-serine biosynthetic process | 6.73E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 6.73E-04 |
| 29 | GO:0031365: N-terminal protein amino acid modification | 6.73E-04 |
| 30 | GO:0016554: cytidine to uridine editing | 8.23E-04 |
| 31 | GO:0010190: cytochrome b6f complex assembly | 8.23E-04 |
| 32 | GO:0042549: photosystem II stabilization | 8.23E-04 |
| 33 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 8.23E-04 |
| 34 | GO:0009817: defense response to fungus, incompatible interaction | 8.66E-04 |
| 35 | GO:0018298: protein-chromophore linkage | 8.66E-04 |
| 36 | GO:0010189: vitamin E biosynthetic process | 9.79E-04 |
| 37 | GO:0010196: nonphotochemical quenching | 1.14E-03 |
| 38 | GO:0050829: defense response to Gram-negative bacterium | 1.14E-03 |
| 39 | GO:0009645: response to low light intensity stimulus | 1.14E-03 |
| 40 | GO:0006400: tRNA modification | 1.14E-03 |
| 41 | GO:0009395: phospholipid catabolic process | 1.14E-03 |
| 42 | GO:0030091: protein repair | 1.32E-03 |
| 43 | GO:0009657: plastid organization | 1.50E-03 |
| 44 | GO:0017004: cytochrome complex assembly | 1.50E-03 |
| 45 | GO:0006002: fructose 6-phosphate metabolic process | 1.50E-03 |
| 46 | GO:0045454: cell redox homeostasis | 1.53E-03 |
| 47 | GO:0000373: Group II intron splicing | 1.69E-03 |
| 48 | GO:0006364: rRNA processing | 1.85E-03 |
| 49 | GO:1900865: chloroplast RNA modification | 1.89E-03 |
| 50 | GO:0009773: photosynthetic electron transport in photosystem I | 2.31E-03 |
| 51 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.31E-03 |
| 52 | GO:0006820: anion transport | 2.53E-03 |
| 53 | GO:0006094: gluconeogenesis | 2.76E-03 |
| 54 | GO:0009767: photosynthetic electron transport chain | 2.76E-03 |
| 55 | GO:0005986: sucrose biosynthetic process | 2.76E-03 |
| 56 | GO:0019253: reductive pentose-phosphate cycle | 2.99E-03 |
| 57 | GO:0010207: photosystem II assembly | 2.99E-03 |
| 58 | GO:0005985: sucrose metabolic process | 3.23E-03 |
| 59 | GO:0009969: xyloglucan biosynthetic process | 3.23E-03 |
| 60 | GO:0009225: nucleotide-sugar metabolic process | 3.23E-03 |
| 61 | GO:0009409: response to cold | 3.31E-03 |
| 62 | GO:0009735: response to cytokinin | 3.67E-03 |
| 63 | GO:0009790: embryo development | 3.79E-03 |
| 64 | GO:0009306: protein secretion | 5.09E-03 |
| 65 | GO:0016117: carotenoid biosynthetic process | 5.38E-03 |
| 66 | GO:0006814: sodium ion transport | 6.28E-03 |
| 67 | GO:0019252: starch biosynthetic process | 6.60E-03 |
| 68 | GO:0002229: defense response to oomycetes | 6.91E-03 |
| 69 | GO:0006412: translation | 7.50E-03 |
| 70 | GO:0042128: nitrate assimilation | 9.65E-03 |
| 71 | GO:0010218: response to far red light | 1.15E-02 |
| 72 | GO:0010119: regulation of stomatal movement | 1.19E-02 |
| 73 | GO:0032259: methylation | 1.21E-02 |
| 74 | GO:0009637: response to blue light | 1.27E-02 |
| 75 | GO:0006839: mitochondrial transport | 1.39E-02 |
| 76 | GO:0010114: response to red light | 1.52E-02 |
| 77 | GO:0009644: response to high light intensity | 1.61E-02 |
| 78 | GO:0018105: peptidyl-serine phosphorylation | 2.47E-02 |
| 79 | GO:0006396: RNA processing | 2.47E-02 |
| 80 | GO:0055114: oxidation-reduction process | 2.62E-02 |
| 81 | GO:0040008: regulation of growth | 3.45E-02 |
| 82 | GO:0009451: RNA modification | 3.63E-02 |
| 83 | GO:0042254: ribosome biogenesis | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 3 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 7 | GO:0051920: peroxiredoxin activity | 7.88E-08 |
| 8 | GO:0016209: antioxidant activity | 2.02E-07 |
| 9 | GO:0016149: translation release factor activity, codon specific | 2.38E-06 |
| 10 | GO:0004033: aldo-keto reductase (NADP) activity | 3.06E-05 |
| 11 | GO:0003747: translation release factor activity | 4.89E-05 |
| 12 | GO:0042586: peptide deformylase activity | 6.74E-05 |
| 13 | GO:0051996: squalene synthase activity | 6.74E-05 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 6.74E-05 |
| 15 | GO:0009496: plastoquinol--plastocyanin reductase activity | 6.74E-05 |
| 16 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 6.74E-05 |
| 17 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 6.74E-05 |
| 18 | GO:0004601: peroxidase activity | 1.07E-04 |
| 19 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 1.62E-04 |
| 20 | GO:0047746: chlorophyllase activity | 1.62E-04 |
| 21 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.62E-04 |
| 22 | GO:0033201: alpha-1,4-glucan synthase activity | 1.62E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.62E-04 |
| 24 | GO:0031409: pigment binding | 1.68E-04 |
| 25 | GO:0004373: glycogen (starch) synthase activity | 2.75E-04 |
| 26 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 2.75E-04 |
| 27 | GO:0070402: NADPH binding | 2.75E-04 |
| 28 | GO:0019843: rRNA binding | 3.63E-04 |
| 29 | GO:0043023: ribosomal large subunit binding | 3.98E-04 |
| 30 | GO:0008508: bile acid:sodium symporter activity | 3.98E-04 |
| 31 | GO:0009011: starch synthase activity | 5.32E-04 |
| 32 | GO:0050378: UDP-glucuronate 4-epimerase activity | 5.32E-04 |
| 33 | GO:0004659: prenyltransferase activity | 5.32E-04 |
| 34 | GO:0008381: mechanically-gated ion channel activity | 6.73E-04 |
| 35 | GO:0016168: chlorophyll binding | 7.08E-04 |
| 36 | GO:0004222: metalloendopeptidase activity | 9.50E-04 |
| 37 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 9.79E-04 |
| 38 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 9.79E-04 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.49E-03 |
| 40 | GO:0008378: galactosyltransferase activity | 2.53E-03 |
| 41 | GO:0004089: carbonate dehydratase activity | 2.76E-03 |
| 42 | GO:0031072: heat shock protein binding | 2.76E-03 |
| 43 | GO:0008266: poly(U) RNA binding | 2.99E-03 |
| 44 | GO:0046872: metal ion binding | 6.25E-03 |
| 45 | GO:0050662: coenzyme binding | 6.28E-03 |
| 46 | GO:0008168: methyltransferase activity | 6.65E-03 |
| 47 | GO:0016759: cellulose synthase activity | 7.90E-03 |
| 48 | GO:0008237: metallopeptidase activity | 8.24E-03 |
| 49 | GO:0016597: amino acid binding | 8.59E-03 |
| 50 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 9.65E-03 |
| 51 | GO:0004683: calmodulin-dependent protein kinase activity | 1.00E-02 |
| 52 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.04E-02 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.08E-02 |
| 54 | GO:0003824: catalytic activity | 1.13E-02 |
| 55 | GO:0003993: acid phosphatase activity | 1.31E-02 |
| 56 | GO:0004519: endonuclease activity | 1.38E-02 |
| 57 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.39E-02 |
| 58 | GO:0051287: NAD binding | 1.74E-02 |
| 59 | GO:0051082: unfolded protein binding | 2.42E-02 |
| 60 | GO:0005516: calmodulin binding | 3.39E-02 |
| 61 | GO:0000287: magnesium ion binding | 4.80E-02 |
| 62 | GO:0016788: hydrolase activity, acting on ester bonds | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.73E-30 |
| 2 | GO:0009941: chloroplast envelope | 4.05E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.97E-13 |
| 4 | GO:0009570: chloroplast stroma | 6.36E-12 |
| 5 | GO:0010287: plastoglobule | 8.44E-07 |
| 6 | GO:0009534: chloroplast thylakoid | 1.16E-06 |
| 7 | GO:0009579: thylakoid | 1.59E-05 |
| 8 | GO:0010319: stromule | 2.82E-05 |
| 9 | GO:0009782: photosystem I antenna complex | 6.74E-05 |
| 10 | GO:0009536: plastid | 1.04E-04 |
| 11 | GO:0030076: light-harvesting complex | 1.49E-04 |
| 12 | GO:0009706: chloroplast inner membrane | 2.70E-04 |
| 13 | GO:0009512: cytochrome b6f complex | 6.73E-04 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 1.14E-03 |
| 15 | GO:0009501: amyloplast | 1.32E-03 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.53E-03 |
| 17 | GO:0005875: microtubule associated complex | 3.48E-03 |
| 18 | GO:0009522: photosystem I | 6.28E-03 |
| 19 | GO:0009523: photosystem II | 6.60E-03 |
| 20 | GO:0032580: Golgi cisterna membrane | 7.90E-03 |
| 21 | GO:0031969: chloroplast membrane | 8.57E-03 |
| 22 | GO:0005840: ribosome | 1.07E-02 |
| 23 | GO:0015934: large ribosomal subunit | 1.19E-02 |
| 24 | GO:0048046: apoplast | 1.47E-02 |
| 25 | GO:0016020: membrane | 1.59E-02 |
| 26 | GO:0016021: integral component of membrane | 2.20E-02 |
| 27 | GO:0009543: chloroplast thylakoid lumen | 2.84E-02 |
| 28 | GO:0046658: anchored component of plasma membrane | 4.35E-02 |