GO Enrichment Analysis of Co-expressed Genes with
AT5G39990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009448: gamma-aminobutyric acid metabolic process | 0.00E+00 |
| 2 | GO:0070070: proton-transporting V-type ATPase complex assembly | 0.00E+00 |
| 3 | GO:0006105: succinate metabolic process | 0.00E+00 |
| 4 | GO:0043171: peptide catabolic process | 0.00E+00 |
| 5 | GO:0060213: positive regulation of nuclear-transcribed mRNA poly(A) tail shortening | 0.00E+00 |
| 6 | GO:0000390: spliceosomal complex disassembly | 0.00E+00 |
| 7 | GO:0009312: oligosaccharide biosynthetic process | 0.00E+00 |
| 8 | GO:0019484: beta-alanine catabolic process | 0.00E+00 |
| 9 | GO:0009865: pollen tube adhesion | 1.62E-04 |
| 10 | GO:0006540: glutamate decarboxylation to succinate | 1.62E-04 |
| 11 | GO:0000291: nuclear-transcribed mRNA catabolic process, exonucleolytic | 1.62E-04 |
| 12 | GO:0009450: gamma-aminobutyric acid catabolic process | 1.62E-04 |
| 13 | GO:1990641: response to iron ion starvation | 1.62E-04 |
| 14 | GO:0043687: post-translational protein modification | 1.62E-04 |
| 15 | GO:0046520: sphingoid biosynthetic process | 1.62E-04 |
| 16 | GO:0010289: homogalacturonan biosynthetic process | 3.69E-04 |
| 17 | GO:0010033: response to organic substance | 3.69E-04 |
| 18 | GO:0045948: positive regulation of translational initiation | 3.69E-04 |
| 19 | GO:0006101: citrate metabolic process | 3.69E-04 |
| 20 | GO:0090630: activation of GTPase activity | 6.04E-04 |
| 21 | GO:0042256: mature ribosome assembly | 6.04E-04 |
| 22 | GO:0006954: inflammatory response | 6.04E-04 |
| 23 | GO:0006882: cellular zinc ion homeostasis | 8.63E-04 |
| 24 | GO:0006020: inositol metabolic process | 8.63E-04 |
| 25 | GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly | 8.63E-04 |
| 26 | GO:2001289: lipid X metabolic process | 8.63E-04 |
| 27 | GO:0070301: cellular response to hydrogen peroxide | 8.63E-04 |
| 28 | GO:0015749: monosaccharide transport | 8.63E-04 |
| 29 | GO:0009963: positive regulation of flavonoid biosynthetic process | 8.63E-04 |
| 30 | GO:0051601: exocyst localization | 8.63E-04 |
| 31 | GO:0006878: cellular copper ion homeostasis | 1.14E-03 |
| 32 | GO:0015743: malate transport | 1.14E-03 |
| 33 | GO:0006536: glutamate metabolic process | 1.14E-03 |
| 34 | GO:0048544: recognition of pollen | 1.28E-03 |
| 35 | GO:0006623: protein targeting to vacuole | 1.37E-03 |
| 36 | GO:0006886: intracellular protein transport | 1.41E-03 |
| 37 | GO:0018279: protein N-linked glycosylation via asparagine | 1.45E-03 |
| 38 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.47E-03 |
| 39 | GO:0006635: fatty acid beta-oxidation | 1.47E-03 |
| 40 | GO:0007035: vacuolar acidification | 1.78E-03 |
| 41 | GO:0048280: vesicle fusion with Golgi apparatus | 2.14E-03 |
| 42 | GO:0031930: mitochondria-nucleus signaling pathway | 2.14E-03 |
| 43 | GO:0006333: chromatin assembly or disassembly | 2.52E-03 |
| 44 | GO:0006102: isocitrate metabolic process | 2.91E-03 |
| 45 | GO:0007155: cell adhesion | 2.91E-03 |
| 46 | GO:0009061: anaerobic respiration | 2.91E-03 |
| 47 | GO:0006491: N-glycan processing | 2.91E-03 |
| 48 | GO:0060321: acceptance of pollen | 3.33E-03 |
| 49 | GO:0006367: transcription initiation from RNA polymerase II promoter | 3.33E-03 |
| 50 | GO:0006099: tricarboxylic acid cycle | 3.61E-03 |
| 51 | GO:0046916: cellular transition metal ion homeostasis | 3.77E-03 |
| 52 | GO:0030001: metal ion transport | 3.93E-03 |
| 53 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 4.22E-03 |
| 54 | GO:0010629: negative regulation of gene expression | 4.69E-03 |
| 55 | GO:0009970: cellular response to sulfate starvation | 4.69E-03 |
| 56 | GO:0006896: Golgi to vacuole transport | 4.69E-03 |
| 57 | GO:0006995: cellular response to nitrogen starvation | 4.69E-03 |
| 58 | GO:0043085: positive regulation of catalytic activity | 5.19E-03 |
| 59 | GO:0006829: zinc II ion transport | 6.22E-03 |
| 60 | GO:2000012: regulation of auxin polar transport | 6.22E-03 |
| 61 | GO:0010102: lateral root morphogenesis | 6.22E-03 |
| 62 | GO:0006446: regulation of translational initiation | 6.76E-03 |
| 63 | GO:0006541: glutamine metabolic process | 6.76E-03 |
| 64 | GO:0005985: sucrose metabolic process | 7.32E-03 |
| 65 | GO:0045333: cellular respiration | 8.48E-03 |
| 66 | GO:0006825: copper ion transport | 9.09E-03 |
| 67 | GO:0009695: jasmonic acid biosynthetic process | 9.09E-03 |
| 68 | GO:0010227: floral organ abscission | 1.10E-02 |
| 69 | GO:0009306: protein secretion | 1.17E-02 |
| 70 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.24E-02 |
| 71 | GO:0042147: retrograde transport, endosome to Golgi | 1.24E-02 |
| 72 | GO:0015991: ATP hydrolysis coupled proton transport | 1.31E-02 |
| 73 | GO:0042391: regulation of membrane potential | 1.31E-02 |
| 74 | GO:0046323: glucose import | 1.38E-02 |
| 75 | GO:0045489: pectin biosynthetic process | 1.38E-02 |
| 76 | GO:0010154: fruit development | 1.38E-02 |
| 77 | GO:0015986: ATP synthesis coupled proton transport | 1.45E-02 |
| 78 | GO:0042752: regulation of circadian rhythm | 1.45E-02 |
| 79 | GO:0010183: pollen tube guidance | 1.52E-02 |
| 80 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.65E-02 |
| 81 | GO:0009630: gravitropism | 1.67E-02 |
| 82 | GO:0006914: autophagy | 1.83E-02 |
| 83 | GO:0010252: auxin homeostasis | 1.83E-02 |
| 84 | GO:0010286: heat acclimation | 1.91E-02 |
| 85 | GO:0006904: vesicle docking involved in exocytosis | 1.91E-02 |
| 86 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.16E-02 |
| 87 | GO:0048573: photoperiodism, flowering | 2.33E-02 |
| 88 | GO:0006950: response to stress | 2.33E-02 |
| 89 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.33E-02 |
| 90 | GO:0009860: pollen tube growth | 2.47E-02 |
| 91 | GO:0048481: plant ovule development | 2.51E-02 |
| 92 | GO:0006811: ion transport | 2.69E-02 |
| 93 | GO:0010119: regulation of stomatal movement | 2.78E-02 |
| 94 | GO:0009651: response to salt stress | 2.80E-02 |
| 95 | GO:0016051: carbohydrate biosynthetic process | 2.97E-02 |
| 96 | GO:0006887: exocytosis | 3.35E-02 |
| 97 | GO:0006897: endocytosis | 3.35E-02 |
| 98 | GO:0042542: response to hydrogen peroxide | 3.45E-02 |
| 99 | GO:0009926: auxin polar transport | 3.55E-02 |
| 100 | GO:0009744: response to sucrose | 3.55E-02 |
| 101 | GO:0051707: response to other organism | 3.55E-02 |
| 102 | GO:0009640: photomorphogenesis | 3.55E-02 |
| 103 | GO:0000209: protein polyubiquitination | 3.66E-02 |
| 104 | GO:0000165: MAPK cascade | 4.07E-02 |
| 105 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 4.07E-02 |
| 106 | GO:0009846: pollen germination | 4.18E-02 |
| 107 | GO:0009809: lignin biosynthetic process | 4.39E-02 |
| 108 | GO:0009414: response to water deprivation | 4.39E-02 |
| 109 | GO:0006857: oligopeptide transport | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 2 | GO:0034387: 4-aminobutyrate:pyruvate transaminase activity | 0.00E+00 |
| 3 | GO:1990446: U1 snRNP binding | 0.00E+00 |
| 4 | GO:0047205: quinate O-hydroxycinnamoyltransferase activity | 0.00E+00 |
| 5 | GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity | 0.00E+00 |
| 6 | GO:0047172: shikimate O-hydroxycinnamoyltransferase activity | 0.00E+00 |
| 7 | GO:0019211: phosphatase activator activity | 0.00E+00 |
| 8 | GO:0009679: hexose:proton symporter activity | 1.62E-04 |
| 9 | GO:0000170: sphingosine hydroxylase activity | 1.62E-04 |
| 10 | GO:0010013: N-1-naphthylphthalamic acid binding | 1.62E-04 |
| 11 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 1.62E-04 |
| 12 | GO:0046870: cadmium ion binding | 1.62E-04 |
| 13 | GO:0003867: 4-aminobutyrate transaminase activity | 1.62E-04 |
| 14 | GO:0070006: metalloaminopeptidase activity | 1.62E-04 |
| 15 | GO:0004177: aminopeptidase activity | 3.02E-04 |
| 16 | GO:0032791: lead ion binding | 3.69E-04 |
| 17 | GO:0003994: aconitate hydratase activity | 3.69E-04 |
| 18 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 3.69E-04 |
| 19 | GO:0042284: sphingolipid delta-4 desaturase activity | 3.69E-04 |
| 20 | GO:0004096: catalase activity | 6.04E-04 |
| 21 | GO:0019829: cation-transporting ATPase activity | 6.04E-04 |
| 22 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 8.63E-04 |
| 23 | GO:0004300: enoyl-CoA hydratase activity | 8.63E-04 |
| 24 | GO:0048027: mRNA 5'-UTR binding | 8.63E-04 |
| 25 | GO:0004108: citrate (Si)-synthase activity | 8.63E-04 |
| 26 | GO:0030527: structural constituent of chromatin | 8.63E-04 |
| 27 | GO:0005253: anion channel activity | 1.14E-03 |
| 28 | GO:0004576: oligosaccharyl transferase activity | 1.14E-03 |
| 29 | GO:0042277: peptide binding | 1.14E-03 |
| 30 | GO:0009916: alternative oxidase activity | 1.14E-03 |
| 31 | GO:0015145: monosaccharide transmembrane transporter activity | 1.45E-03 |
| 32 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.45E-03 |
| 33 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.45E-03 |
| 34 | GO:0004722: protein serine/threonine phosphatase activity | 1.55E-03 |
| 35 | GO:0031369: translation initiation factor binding | 1.78E-03 |
| 36 | GO:0051117: ATPase binding | 1.78E-03 |
| 37 | GO:0003730: mRNA 3'-UTR binding | 2.14E-03 |
| 38 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 2.14E-03 |
| 39 | GO:0015140: malate transmembrane transporter activity | 2.52E-03 |
| 40 | GO:0004525: ribonuclease III activity | 2.91E-03 |
| 41 | GO:0050897: cobalt ion binding | 3.16E-03 |
| 42 | GO:0005375: copper ion transmembrane transporter activity | 3.33E-03 |
| 43 | GO:0016887: ATPase activity | 3.61E-03 |
| 44 | GO:0000149: SNARE binding | 3.77E-03 |
| 45 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 5.19E-03 |
| 46 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.22E-03 |
| 47 | GO:0030552: cAMP binding | 7.32E-03 |
| 48 | GO:0030553: cGMP binding | 7.32E-03 |
| 49 | GO:0005507: copper ion binding | 7.59E-03 |
| 50 | GO:0043424: protein histidine kinase binding | 9.09E-03 |
| 51 | GO:0005216: ion channel activity | 9.09E-03 |
| 52 | GO:0004176: ATP-dependent peptidase activity | 9.72E-03 |
| 53 | GO:0004707: MAP kinase activity | 9.72E-03 |
| 54 | GO:0016779: nucleotidyltransferase activity | 1.04E-02 |
| 55 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.04E-02 |
| 56 | GO:0003727: single-stranded RNA binding | 1.17E-02 |
| 57 | GO:0015144: carbohydrate transmembrane transporter activity | 1.28E-02 |
| 58 | GO:0008565: protein transporter activity | 1.28E-02 |
| 59 | GO:0005249: voltage-gated potassium channel activity | 1.31E-02 |
| 60 | GO:0030551: cyclic nucleotide binding | 1.31E-02 |
| 61 | GO:0046873: metal ion transmembrane transporter activity | 1.38E-02 |
| 62 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.38E-02 |
| 63 | GO:0005351: sugar:proton symporter activity | 1.44E-02 |
| 64 | GO:0004872: receptor activity | 1.52E-02 |
| 65 | GO:0008237: metallopeptidase activity | 1.91E-02 |
| 66 | GO:0008375: acetylglucosaminyltransferase activity | 2.24E-02 |
| 67 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.24E-02 |
| 68 | GO:0046982: protein heterodimerization activity | 2.25E-02 |
| 69 | GO:0004683: calmodulin-dependent protein kinase activity | 2.33E-02 |
| 70 | GO:0005096: GTPase activator activity | 2.60E-02 |
| 71 | GO:0004222: metalloendopeptidase activity | 2.69E-02 |
| 72 | GO:0003697: single-stranded DNA binding | 2.97E-02 |
| 73 | GO:0005516: calmodulin binding | 3.14E-02 |
| 74 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.26E-02 |
| 75 | GO:0005484: SNAP receptor activity | 3.55E-02 |
| 76 | GO:0005515: protein binding | 3.61E-02 |
| 77 | GO:0005509: calcium ion binding | 4.09E-02 |
| 78 | GO:0016301: kinase activity | 4.23E-02 |
| 79 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.39E-02 |
| 80 | GO:0045735: nutrient reservoir activity | 4.94E-02 |
| 81 | GO:0008270: zinc ion binding | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071008: U2-type post-mRNA release spliceosomal complex | 0.00E+00 |
| 2 | GO:0031981: nuclear lumen | 0.00E+00 |
| 3 | GO:0016021: integral component of membrane | 7.75E-07 |
| 4 | GO:0005802: trans-Golgi network | 1.76E-05 |
| 5 | GO:0012510: trans-Golgi network transport vesicle membrane | 1.62E-04 |
| 6 | GO:0031090: organelle membrane | 1.84E-04 |
| 7 | GO:0005783: endoplasmic reticulum | 2.55E-04 |
| 8 | GO:0005794: Golgi apparatus | 2.77E-04 |
| 9 | GO:0032777: Piccolo NuA4 histone acetyltransferase complex | 3.69E-04 |
| 10 | GO:0031902: late endosome membrane | 4.88E-04 |
| 11 | GO:0005795: Golgi stack | 5.00E-04 |
| 12 | GO:0005768: endosome | 7.31E-04 |
| 13 | GO:0005776: autophagosome | 1.14E-03 |
| 14 | GO:0016471: vacuolar proton-transporting V-type ATPase complex | 1.14E-03 |
| 15 | GO:0005777: peroxisome | 1.28E-03 |
| 16 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 1.45E-03 |
| 17 | GO:0008250: oligosaccharyltransferase complex | 1.45E-03 |
| 18 | GO:0005886: plasma membrane | 1.58E-03 |
| 19 | GO:0030140: trans-Golgi network transport vesicle | 1.78E-03 |
| 20 | GO:0005789: endoplasmic reticulum membrane | 2.07E-03 |
| 21 | GO:0016363: nuclear matrix | 2.14E-03 |
| 22 | GO:0009705: plant-type vacuole membrane | 2.42E-03 |
| 23 | GO:0012507: ER to Golgi transport vesicle membrane | 2.91E-03 |
| 24 | GO:0030131: clathrin adaptor complex | 2.91E-03 |
| 25 | GO:0000325: plant-type vacuole | 3.16E-03 |
| 26 | GO:0000786: nucleosome | 3.31E-03 |
| 27 | GO:0030665: clathrin-coated vesicle membrane | 4.22E-03 |
| 28 | GO:0017119: Golgi transport complex | 4.69E-03 |
| 29 | GO:0030125: clathrin vesicle coat | 4.69E-03 |
| 30 | GO:0005665: DNA-directed RNA polymerase II, core complex | 5.69E-03 |
| 31 | GO:0010008: endosome membrane | 7.31E-03 |
| 32 | GO:0070469: respiratory chain | 9.09E-03 |
| 33 | GO:0005905: clathrin-coated pit | 9.72E-03 |
| 34 | GO:0031410: cytoplasmic vesicle | 1.04E-02 |
| 35 | GO:0009506: plasmodesma | 1.08E-02 |
| 36 | GO:0005770: late endosome | 1.38E-02 |
| 37 | GO:0031965: nuclear membrane | 1.52E-02 |
| 38 | GO:0000145: exocyst | 1.67E-02 |
| 39 | GO:0000785: chromatin | 1.67E-02 |
| 40 | GO:0000139: Golgi membrane | 2.03E-02 |
| 41 | GO:0000932: P-body | 2.07E-02 |
| 42 | GO:0005773: vacuole | 2.33E-02 |
| 43 | GO:0031201: SNARE complex | 3.35E-02 |
| 44 | GO:0005622: intracellular | 3.85E-02 |
| 45 | GO:0005856: cytoskeleton | 3.86E-02 |
| 46 | GO:0016020: membrane | 4.35E-02 |