GO Enrichment Analysis of Co-expressed Genes with
AT5G39860
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 4 | GO:0043007: maintenance of rDNA | 1.97E-05 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 1.66E-04 |
| 6 | GO:0042938: dipeptide transport | 1.86E-04 |
| 7 | GO:0009823: cytokinin catabolic process | 2.40E-04 |
| 8 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.97E-04 |
| 9 | GO:0032973: amino acid export | 2.97E-04 |
| 10 | GO:0009228: thiamine biosynthetic process | 2.97E-04 |
| 11 | GO:0009640: photomorphogenesis | 3.07E-04 |
| 12 | GO:0043090: amino acid import | 4.19E-04 |
| 13 | GO:0050829: defense response to Gram-negative bacterium | 4.19E-04 |
| 14 | GO:0009690: cytokinin metabolic process | 4.84E-04 |
| 15 | GO:0009642: response to light intensity | 4.84E-04 |
| 16 | GO:0046620: regulation of organ growth | 4.84E-04 |
| 17 | GO:0009657: plastid organization | 5.50E-04 |
| 18 | GO:0080144: amino acid homeostasis | 6.19E-04 |
| 19 | GO:0048507: meristem development | 6.19E-04 |
| 20 | GO:0010205: photoinhibition | 6.90E-04 |
| 21 | GO:0043085: positive regulation of catalytic activity | 8.37E-04 |
| 22 | GO:0015706: nitrate transport | 9.12E-04 |
| 23 | GO:0016114: terpenoid biosynthetic process | 1.50E-03 |
| 24 | GO:0006662: glycerol ether metabolic process | 2.08E-03 |
| 25 | GO:0010305: leaf vascular tissue pattern formation | 2.08E-03 |
| 26 | GO:0045454: cell redox homeostasis | 2.18E-03 |
| 27 | GO:0010193: response to ozone | 2.40E-03 |
| 28 | GO:0009734: auxin-activated signaling pathway | 3.74E-03 |
| 29 | GO:0007568: aging | 4.06E-03 |
| 30 | GO:0009910: negative regulation of flower development | 4.06E-03 |
| 31 | GO:0006865: amino acid transport | 4.19E-03 |
| 32 | GO:0034599: cellular response to oxidative stress | 4.45E-03 |
| 33 | GO:0010114: response to red light | 5.13E-03 |
| 34 | GO:0009926: auxin polar transport | 5.13E-03 |
| 35 | GO:0009585: red, far-red light phototransduction | 6.31E-03 |
| 36 | GO:0010224: response to UV-B | 6.46E-03 |
| 37 | GO:0006857: oligopeptide transport | 6.61E-03 |
| 38 | GO:0006417: regulation of translation | 6.76E-03 |
| 39 | GO:0042545: cell wall modification | 7.89E-03 |
| 40 | GO:0006396: RNA processing | 8.22E-03 |
| 41 | GO:0055114: oxidation-reduction process | 9.90E-03 |
| 42 | GO:0009790: embryo development | 1.05E-02 |
| 43 | GO:0009733: response to auxin | 1.07E-02 |
| 44 | GO:0040008: regulation of growth | 1.14E-02 |
| 45 | GO:0045490: pectin catabolic process | 1.18E-02 |
| 46 | GO:0007275: multicellular organism development | 1.88E-02 |
| 47 | GO:0015979: photosynthesis | 2.06E-02 |
| 48 | GO:0006869: lipid transport | 2.28E-02 |
| 49 | GO:0016042: lipid catabolic process | 2.42E-02 |
| 50 | GO:0006629: lipid metabolic process | 2.47E-02 |
| 51 | GO:0006281: DNA repair | 2.47E-02 |
| 52 | GO:0006397: mRNA processing | 2.55E-02 |
| 53 | GO:0048364: root development | 2.55E-02 |
| 54 | GO:0006508: proteolysis | 2.94E-02 |
| 55 | GO:0009908: flower development | 3.47E-02 |
| 56 | GO:0009555: pollen development | 3.72E-02 |
| 57 | GO:0009611: response to wounding | 3.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034639: L-amino acid efflux transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.97E-05 |
| 3 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.97E-05 |
| 4 | GO:0019172: glyoxalase III activity | 5.10E-05 |
| 5 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 5.10E-05 |
| 6 | GO:0016805: dipeptidase activity | 9.05E-05 |
| 7 | GO:0004180: carboxypeptidase activity | 9.05E-05 |
| 8 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 9.05E-05 |
| 9 | GO:0042936: dipeptide transporter activity | 1.86E-04 |
| 10 | GO:0019139: cytokinin dehydrogenase activity | 2.40E-04 |
| 11 | GO:0004462: lactoylglutathione lyase activity | 2.97E-04 |
| 12 | GO:0004602: glutathione peroxidase activity | 3.57E-04 |
| 13 | GO:0008047: enzyme activator activity | 7.62E-04 |
| 14 | GO:0008131: primary amine oxidase activity | 1.07E-03 |
| 15 | GO:0004190: aspartic-type endopeptidase activity | 1.15E-03 |
| 16 | GO:0003727: single-stranded RNA binding | 1.78E-03 |
| 17 | GO:0047134: protein-disulfide reductase activity | 1.88E-03 |
| 18 | GO:0004791: thioredoxin-disulfide reductase activity | 2.18E-03 |
| 19 | GO:0048038: quinone binding | 2.40E-03 |
| 20 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.61E-03 |
| 21 | GO:0030145: manganese ion binding | 4.06E-03 |
| 22 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.06E-03 |
| 23 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.58E-03 |
| 24 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.42E-03 |
| 25 | GO:0043621: protein self-association | 5.42E-03 |
| 26 | GO:0016298: lipase activity | 6.46E-03 |
| 27 | GO:0015171: amino acid transmembrane transporter activity | 6.76E-03 |
| 28 | GO:0045330: aspartyl esterase activity | 6.76E-03 |
| 29 | GO:0030599: pectinesterase activity | 7.72E-03 |
| 30 | GO:0015035: protein disulfide oxidoreductase activity | 8.22E-03 |
| 31 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 9.60E-03 |
| 32 | GO:0046910: pectinesterase inhibitor activity | 1.12E-02 |
| 33 | GO:0016788: hydrolase activity, acting on ester bonds | 1.63E-02 |
| 34 | GO:0050660: flavin adenine dinucleotide binding | 1.78E-02 |
| 35 | GO:0008233: peptidase activity | 1.85E-02 |
| 36 | GO:0052689: carboxylic ester hydrolase activity | 2.01E-02 |
| 37 | GO:0004871: signal transducer activity | 2.20E-02 |
| 38 | GO:0008289: lipid binding | 3.13E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 3.87E-07 |
| 2 | GO:0030095: chloroplast photosystem II | 2.16E-05 |
| 3 | GO:0030660: Golgi-associated vesicle membrane | 1.86E-04 |
| 4 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 1.86E-04 |
| 5 | GO:0009533: chloroplast stromal thylakoid | 4.19E-04 |
| 6 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 4.84E-04 |
| 7 | GO:0009570: chloroplast stroma | 6.72E-04 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 7.20E-04 |
| 9 | GO:0009534: chloroplast thylakoid | 7.26E-04 |
| 10 | GO:0005765: lysosomal membrane | 8.37E-04 |
| 11 | GO:0042651: thylakoid membrane | 1.41E-03 |
| 12 | GO:0009507: chloroplast | 1.53E-03 |
| 13 | GO:0009941: chloroplast envelope | 1.94E-03 |
| 14 | GO:0009523: photosystem II | 2.29E-03 |
| 15 | GO:0071944: cell periphery | 2.61E-03 |
| 16 | GO:0031977: thylakoid lumen | 4.86E-03 |
| 17 | GO:0010008: endosome membrane | 7.24E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 8.05E-03 |
| 19 | GO:0005623: cell | 9.60E-03 |
| 20 | GO:0005615: extracellular space | 1.28E-02 |
| 21 | GO:0046658: anchored component of plasma membrane | 1.44E-02 |
| 22 | GO:0031969: chloroplast membrane | 1.87E-02 |
| 23 | GO:0005886: plasma membrane | 3.67E-02 |
| 24 | GO:0005618: cell wall | 3.78E-02 |
| 25 | GO:0009579: thylakoid | 4.23E-02 |