GO Enrichment Analysis of Co-expressed Genes with
AT5G39210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043697: cell dedifferentiation | 0.00E+00 |
| 2 | GO:0009249: protein lipoylation | 0.00E+00 |
| 3 | GO:0060184: cell cycle switching | 0.00E+00 |
| 4 | GO:0009301: snRNA transcription | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 7 | GO:0006546: glycine catabolic process | 4.96E-06 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.96E-06 |
| 9 | GO:0009658: chloroplast organization | 1.20E-04 |
| 10 | GO:0009767: photosynthetic electron transport chain | 1.23E-04 |
| 11 | GO:0019253: reductive pentose-phosphate cycle | 1.41E-04 |
| 12 | GO:0080183: response to photooxidative stress | 1.70E-04 |
| 13 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.70E-04 |
| 14 | GO:0009945: radial axis specification | 1.70E-04 |
| 15 | GO:0006810: transport | 1.84E-04 |
| 16 | GO:0061077: chaperone-mediated protein folding | 2.46E-04 |
| 17 | GO:0071492: cellular response to UV-A | 2.86E-04 |
| 18 | GO:0006000: fructose metabolic process | 2.86E-04 |
| 19 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 4.15E-04 |
| 20 | GO:2001141: regulation of RNA biosynthetic process | 4.15E-04 |
| 21 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.15E-04 |
| 22 | GO:0010239: chloroplast mRNA processing | 4.15E-04 |
| 23 | GO:0071486: cellular response to high light intensity | 5.53E-04 |
| 24 | GO:0010236: plastoquinone biosynthetic process | 7.00E-04 |
| 25 | GO:0009107: lipoate biosynthetic process | 7.00E-04 |
| 26 | GO:1902183: regulation of shoot apical meristem development | 7.00E-04 |
| 27 | GO:0071368: cellular response to cytokinin stimulus | 7.00E-04 |
| 28 | GO:0010190: cytochrome b6f complex assembly | 8.57E-04 |
| 29 | GO:0016554: cytidine to uridine editing | 8.57E-04 |
| 30 | GO:0010014: meristem initiation | 1.02E-03 |
| 31 | GO:0006458: 'de novo' protein folding | 1.02E-03 |
| 32 | GO:0009942: longitudinal axis specification | 1.02E-03 |
| 33 | GO:0042026: protein refolding | 1.02E-03 |
| 34 | GO:0016559: peroxisome fission | 1.37E-03 |
| 35 | GO:0048564: photosystem I assembly | 1.37E-03 |
| 36 | GO:0008610: lipid biosynthetic process | 1.37E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 1.56E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.56E-03 |
| 39 | GO:0015979: photosynthesis | 1.56E-03 |
| 40 | GO:0009657: plastid organization | 1.56E-03 |
| 41 | GO:0010206: photosystem II repair | 1.76E-03 |
| 42 | GO:2000024: regulation of leaf development | 1.76E-03 |
| 43 | GO:1900865: chloroplast RNA modification | 1.97E-03 |
| 44 | GO:0019684: photosynthesis, light reaction | 2.41E-03 |
| 45 | GO:0006352: DNA-templated transcription, initiation | 2.41E-03 |
| 46 | GO:0000272: polysaccharide catabolic process | 2.41E-03 |
| 47 | GO:0009750: response to fructose | 2.41E-03 |
| 48 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.41E-03 |
| 49 | GO:0009773: photosynthetic electron transport in photosystem I | 2.41E-03 |
| 50 | GO:0006415: translational termination | 2.41E-03 |
| 51 | GO:0071365: cellular response to auxin stimulus | 2.64E-03 |
| 52 | GO:0005983: starch catabolic process | 2.64E-03 |
| 53 | GO:0045037: protein import into chloroplast stroma | 2.64E-03 |
| 54 | GO:0006094: gluconeogenesis | 2.88E-03 |
| 55 | GO:0005986: sucrose biosynthetic process | 2.88E-03 |
| 56 | GO:0009887: animal organ morphogenesis | 3.12E-03 |
| 57 | GO:0010020: chloroplast fission | 3.12E-03 |
| 58 | GO:0007031: peroxisome organization | 3.37E-03 |
| 59 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.89E-03 |
| 60 | GO:0006413: translational initiation | 4.44E-03 |
| 61 | GO:0080092: regulation of pollen tube growth | 4.73E-03 |
| 62 | GO:0006284: base-excision repair | 5.32E-03 |
| 63 | GO:0016117: carotenoid biosynthetic process | 5.62E-03 |
| 64 | GO:0010286: heat acclimation | 8.61E-03 |
| 65 | GO:0016311: dephosphorylation | 1.09E-02 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.13E-02 |
| 67 | GO:0010311: lateral root formation | 1.17E-02 |
| 68 | GO:0009853: photorespiration | 1.33E-02 |
| 69 | GO:0009926: auxin polar transport | 1.59E-02 |
| 70 | GO:0009644: response to high light intensity | 1.68E-02 |
| 71 | GO:0042538: hyperosmotic salinity response | 1.87E-02 |
| 72 | GO:0009735: response to cytokinin | 2.20E-02 |
| 73 | GO:0006096: glycolytic process | 2.21E-02 |
| 74 | GO:0006396: RNA processing | 2.58E-02 |
| 75 | GO:0009790: embryo development | 3.31E-02 |
| 76 | GO:0009451: RNA modification | 3.79E-02 |
| 77 | GO:0008380: RNA splicing | 4.23E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008962: phosphatidylglycerophosphatase activity | 0.00E+00 |
| 2 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.59E-06 |
| 5 | GO:0005528: FK506 binding | 4.37E-06 |
| 6 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.83E-05 |
| 7 | GO:0031072: heat shock protein binding | 1.23E-04 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.48E-04 |
| 9 | GO:0017118: lipoyltransferase activity | 1.70E-04 |
| 10 | GO:0004618: phosphoglycerate kinase activity | 1.70E-04 |
| 11 | GO:0016415: octanoyltransferase activity | 1.70E-04 |
| 12 | GO:0004047: aminomethyltransferase activity | 1.70E-04 |
| 13 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.70E-04 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 2.86E-04 |
| 15 | GO:0051082: unfolded protein binding | 2.93E-04 |
| 16 | GO:0016149: translation release factor activity, codon specific | 4.15E-04 |
| 17 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 5.53E-04 |
| 18 | GO:0001053: plastid sigma factor activity | 5.53E-04 |
| 19 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.53E-04 |
| 20 | GO:0016987: sigma factor activity | 5.53E-04 |
| 21 | GO:0008725: DNA-3-methyladenine glycosylase activity | 7.00E-04 |
| 22 | GO:0008374: O-acyltransferase activity | 7.00E-04 |
| 23 | GO:0080030: methyl indole-3-acetate esterase activity | 8.57E-04 |
| 24 | GO:0102229: amylopectin maltohydrolase activity | 8.57E-04 |
| 25 | GO:0016161: beta-amylase activity | 1.02E-03 |
| 26 | GO:0005198: structural molecule activity | 1.64E-03 |
| 27 | GO:0003747: translation release factor activity | 1.76E-03 |
| 28 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.41E-03 |
| 29 | GO:0044183: protein binding involved in protein folding | 2.41E-03 |
| 30 | GO:0022891: substrate-specific transmembrane transporter activity | 5.02E-03 |
| 31 | GO:0003756: protein disulfide isomerase activity | 5.32E-03 |
| 32 | GO:0003743: translation initiation factor activity | 5.56E-03 |
| 33 | GO:0042802: identical protein binding | 6.05E-03 |
| 34 | GO:0048038: quinone binding | 7.22E-03 |
| 35 | GO:0008483: transaminase activity | 8.61E-03 |
| 36 | GO:0016168: chlorophyll binding | 9.71E-03 |
| 37 | GO:0005509: calcium ion binding | 9.85E-03 |
| 38 | GO:0008236: serine-type peptidase activity | 1.09E-02 |
| 39 | GO:0009055: electron carrier activity | 1.45E-02 |
| 40 | GO:0004519: endonuclease activity | 1.47E-02 |
| 41 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.68E-02 |
| 42 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.97E-02 |
| 43 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 2.26E-02 |
| 44 | GO:0022857: transmembrane transporter activity | 2.42E-02 |
| 45 | GO:0016746: transferase activity, transferring acyl groups | 2.58E-02 |
| 46 | GO:0016787: hydrolase activity | 2.85E-02 |
| 47 | GO:0016740: transferase activity | 2.93E-02 |
| 48 | GO:0019843: rRNA binding | 2.96E-02 |
| 49 | GO:0004252: serine-type endopeptidase activity | 3.19E-02 |
| 50 | GO:0008565: protein transporter activity | 3.37E-02 |
| 51 | GO:0008168: methyltransferase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 5.90E-27 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 2.35E-13 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.56E-12 |
| 5 | GO:0009941: chloroplast envelope | 2.95E-08 |
| 6 | GO:0009579: thylakoid | 7.98E-08 |
| 7 | GO:0009570: chloroplast stroma | 1.76E-07 |
| 8 | GO:0030095: chloroplast photosystem II | 2.41E-06 |
| 9 | GO:0005960: glycine cleavage complex | 2.59E-06 |
| 10 | GO:0031977: thylakoid lumen | 3.94E-06 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 5.22E-06 |
| 12 | GO:0019898: extrinsic component of membrane | 1.85E-05 |
| 13 | GO:0009534: chloroplast thylakoid | 1.95E-05 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.26E-05 |
| 15 | GO:0005778: peroxisomal membrane | 6.38E-04 |
| 16 | GO:0005779: integral component of peroxisomal membrane | 1.56E-03 |
| 17 | GO:0016324: apical plasma membrane | 2.19E-03 |
| 18 | GO:0009508: plastid chromosome | 2.88E-03 |
| 19 | GO:0042651: thylakoid membrane | 4.17E-03 |
| 20 | GO:0009532: plastid stroma | 4.44E-03 |
| 21 | GO:0009523: photosystem II | 6.89E-03 |
| 22 | GO:0010319: stromule | 8.61E-03 |
| 23 | GO:0009295: nucleoid | 8.61E-03 |
| 24 | GO:0009706: chloroplast inner membrane | 2.53E-02 |
| 25 | GO:0005623: cell | 3.02E-02 |