Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G39050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046865: terpenoid transport0.00E+00
2GO:0030149: sphingolipid catabolic process0.00E+00
3GO:0006793: phosphorus metabolic process0.00E+00
4GO:0051238: sequestering of metal ion0.00E+00
5GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
6GO:0006564: L-serine biosynthetic process4.70E-06
7GO:0010204: defense response signaling pathway, resistance gene-independent2.48E-05
8GO:0009407: toxin catabolic process3.33E-05
9GO:0015760: glucose-6-phosphate transport5.03E-05
10GO:0046256: 2,4,6-trinitrotoluene catabolic process5.03E-05
11GO:0010421: hydrogen peroxide-mediated programmed cell death5.03E-05
12GO:0033306: phytol metabolic process5.03E-05
13GO:1902478: negative regulation of defense response to bacterium, incompatible interaction5.03E-05
14GO:0032491: detection of molecule of fungal origin5.03E-05
15GO:0010200: response to chitin8.36E-05
16GO:0009805: coumarin biosynthetic process1.23E-04
17GO:0090057: root radial pattern formation1.23E-04
18GO:0002240: response to molecule of oomycetes origin1.23E-04
19GO:0015712: hexose phosphate transport1.23E-04
20GO:0019752: carboxylic acid metabolic process1.23E-04
21GO:1902000: homogentisate catabolic process1.23E-04
22GO:0051592: response to calcium ion1.23E-04
23GO:0031648: protein destabilization1.23E-04
24GO:0055114: oxidation-reduction process1.37E-04
25GO:0015692: lead ion transport2.11E-04
26GO:0009072: aromatic amino acid family metabolic process2.11E-04
27GO:0048281: inflorescence morphogenesis2.11E-04
28GO:0015714: phosphoenolpyruvate transport2.11E-04
29GO:0080168: abscisic acid transport2.11E-04
30GO:0035436: triose phosphate transmembrane transport2.11E-04
31GO:0010351: lithium ion transport2.11E-04
32GO:0080024: indolebutyric acid metabolic process3.09E-04
33GO:0006882: cellular zinc ion homeostasis3.09E-04
34GO:0001676: long-chain fatty acid metabolic process3.09E-04
35GO:0046836: glycolipid transport3.09E-04
36GO:0010193: response to ozone3.23E-04
37GO:0006536: glutamate metabolic process4.15E-04
38GO:0006621: protein retention in ER lumen4.15E-04
39GO:0015713: phosphoglycerate transport4.15E-04
40GO:0015867: ATP transport4.15E-04
41GO:0010109: regulation of photosynthesis4.15E-04
42GO:0060918: auxin transport6.44E-04
43GO:0009117: nucleotide metabolic process6.44E-04
44GO:0002238: response to molecule of fungal origin6.44E-04
45GO:0009643: photosynthetic acclimation6.44E-04
46GO:0050665: hydrogen peroxide biosynthetic process6.44E-04
47GO:0015691: cadmium ion transport6.44E-04
48GO:0015866: ADP transport6.44E-04
49GO:0080167: response to karrikin7.65E-04
50GO:0009854: oxidative photosynthetic carbon pathway7.68E-04
51GO:0030026: cellular manganese ion homeostasis8.97E-04
52GO:0009636: response to toxic substance1.07E-03
53GO:0006855: drug transmembrane transport1.11E-03
54GO:0009699: phenylpropanoid biosynthetic process1.17E-03
55GO:0010497: plasmodesmata-mediated intercellular transport1.17E-03
56GO:0006812: cation transport1.19E-03
57GO:0019432: triglyceride biosynthetic process1.32E-03
58GO:0009753: response to jasmonic acid1.34E-03
59GO:0000723: telomere maintenance1.47E-03
60GO:2000280: regulation of root development1.47E-03
61GO:0055062: phosphate ion homeostasis1.63E-03
62GO:0031627: telomeric loop formation1.63E-03
63GO:0009698: phenylpropanoid metabolic process1.79E-03
64GO:0048229: gametophyte development1.79E-03
65GO:0009624: response to nematode1.80E-03
66GO:0002213: defense response to insect1.96E-03
67GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.96E-03
68GO:0002237: response to molecule of bacterial origin2.32E-03
69GO:0042343: indole glucosinolate metabolic process2.50E-03
70GO:0090351: seedling development2.50E-03
71GO:0070588: calcium ion transmembrane transport2.50E-03
72GO:0006874: cellular calcium ion homeostasis3.08E-03
73GO:0098542: defense response to other organism3.29E-03
74GO:0031348: negative regulation of defense response3.50E-03
75GO:0019748: secondary metabolic process3.50E-03
76GO:0006012: galactose metabolic process3.71E-03
77GO:0009561: megagametogenesis3.93E-03
78GO:0006817: phosphate ion transport3.93E-03
79GO:0009958: positive gravitropism4.60E-03
80GO:0006885: regulation of pH4.60E-03
81GO:0006520: cellular amino acid metabolic process4.60E-03
82GO:0006814: sodium ion transport4.83E-03
83GO:0006623: protein targeting to vacuole5.07E-03
84GO:0009749: response to glucose5.07E-03
85GO:0071554: cell wall organization or biogenesis5.32E-03
86GO:0002229: defense response to oomycetes5.32E-03
87GO:0006635: fatty acid beta-oxidation5.32E-03
88GO:0045892: negative regulation of transcription, DNA-templated7.11E-03
89GO:0006950: response to stress7.68E-03
90GO:0016049: cell growth7.96E-03
91GO:0009751: response to salicylic acid8.51E-03
92GO:0010043: response to zinc ion9.12E-03
93GO:0007568: aging9.12E-03
94GO:0006839: mitochondrial transport1.07E-02
95GO:0006631: fatty acid metabolic process1.10E-02
96GO:0009744: response to sucrose1.16E-02
97GO:0009846: pollen germination1.37E-02
98GO:0009809: lignin biosynthetic process1.44E-02
99GO:0006813: potassium ion transport1.44E-02
100GO:0007165: signal transduction1.57E-02
101GO:0048367: shoot system development1.65E-02
102GO:0009620: response to fungus1.73E-02
103GO:0016036: cellular response to phosphate starvation2.59E-02
104GO:0040008: regulation of growth2.63E-02
105GO:0009739: response to gibberellin2.95E-02
106GO:0009617: response to bacterium3.08E-02
107GO:0042742: defense response to bacterium3.12E-02
108GO:0009860: pollen tube growth3.91E-02
109GO:0015031: protein transport3.95E-02
110GO:0007049: cell cycle4.01E-02
111GO:0009723: response to ethylene4.12E-02
112GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.43E-02
113GO:0016192: vesicle-mediated transport4.48E-02
114GO:0044550: secondary metabolite biosynthetic process4.59E-02
115GO:0015979: photosynthesis4.75E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0005046: KDEL sequence binding0.00E+00
3GO:0016034: maleylacetoacetate isomerase activity0.00E+00
4GO:0004617: phosphoglycerate dehydrogenase activity1.54E-07
5GO:0016831: carboxy-lyase activity1.45E-05
6GO:0090353: polygalacturonase inhibitor activity5.03E-05
7GO:0004364: glutathione transferase activity5.78E-05
8GO:0015152: glucose-6-phosphate transmembrane transporter activity1.23E-04
9GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity1.23E-04
10GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity1.23E-04
11GO:0004385: guanylate kinase activity1.23E-04
12GO:0003958: NADPH-hemoprotein reductase activity1.23E-04
13GO:0071917: triose-phosphate transmembrane transporter activity2.11E-04
14GO:0010181: FMN binding2.81E-04
15GO:0017089: glycolipid transporter activity3.09E-04
16GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.09E-04
17GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.09E-04
18GO:0004351: glutamate decarboxylase activity3.09E-04
19GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.09E-04
20GO:0015297: antiporter activity3.15E-04
21GO:0015369: calcium:proton antiporter activity4.15E-04
22GO:0046923: ER retention sequence binding4.15E-04
23GO:0009916: alternative oxidase activity4.15E-04
24GO:0008891: glycolate oxidase activity4.15E-04
25GO:0015120: phosphoglycerate transmembrane transporter activity4.15E-04
26GO:0015368: calcium:cation antiporter activity4.15E-04
27GO:0004737: pyruvate decarboxylase activity4.15E-04
28GO:0051861: glycolipid binding4.15E-04
29GO:0016597: amino acid binding4.40E-04
30GO:0033926: glycopeptide alpha-N-acetylgalactosaminidase activity5.26E-04
31GO:0030976: thiamine pyrophosphate binding6.44E-04
32GO:0030145: manganese ion binding6.92E-04
33GO:0102391: decanoate--CoA ligase activity7.68E-04
34GO:0003978: UDP-glucose 4-epimerase activity7.68E-04
35GO:0004144: diacylglycerol O-acyltransferase activity7.68E-04
36GO:0005347: ATP transmembrane transporter activity7.68E-04
37GO:0015217: ADP transmembrane transporter activity7.68E-04
38GO:0042162: telomeric DNA binding8.97E-04
39GO:0043295: glutathione binding8.97E-04
40GO:0004467: long-chain fatty acid-CoA ligase activity8.97E-04
41GO:0052747: sinapyl alcohol dehydrogenase activity1.03E-03
42GO:0015491: cation:cation antiporter activity1.03E-03
43GO:0004564: beta-fructofuranosidase activity1.03E-03
44GO:0051287: NAD binding1.15E-03
45GO:0004575: sucrose alpha-glucosidase activity1.47E-03
46GO:0045735: nutrient reservoir activity1.50E-03
47GO:0015020: glucuronosyltransferase activity1.63E-03
48GO:0003691: double-stranded telomeric DNA binding1.79E-03
49GO:0045551: cinnamyl-alcohol dehydrogenase activity1.96E-03
50GO:0005388: calcium-transporting ATPase activity2.14E-03
51GO:0004022: alcohol dehydrogenase (NAD) activity2.14E-03
52GO:0005315: inorganic phosphate transmembrane transporter activity2.14E-03
53GO:0030170: pyridoxal phosphate binding2.48E-03
54GO:0008134: transcription factor binding2.88E-03
55GO:0004298: threonine-type endopeptidase activity3.29E-03
56GO:0043565: sequence-specific DNA binding3.68E-03
57GO:0005516: calmodulin binding4.24E-03
58GO:0005451: monovalent cation:proton antiporter activity4.37E-03
59GO:0015299: solute:proton antiporter activity4.83E-03
60GO:0004872: receptor activity5.07E-03
61GO:0015385: sodium:proton antiporter activity5.81E-03
62GO:0044212: transcription regulatory region DNA binding6.18E-03
63GO:0016413: O-acetyltransferase activity6.59E-03
64GO:0051213: dioxygenase activity6.85E-03
65GO:0015238: drug transmembrane transporter activity8.53E-03
66GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.12E-03
67GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.73E-03
68GO:0080044: quercetin 7-O-glucosyltransferase activity1.73E-02
69GO:0080043: quercetin 3-O-glucosyltransferase activity1.73E-02
70GO:0016758: transferase activity, transferring hexosyl groups2.12E-02
71GO:0008194: UDP-glycosyltransferase activity2.95E-02
72GO:0042802: identical protein binding3.23E-02
73GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.23E-02
74GO:0008168: methyltransferase activity3.61E-02
75GO:0000287: magnesium ion binding3.66E-02
76GO:0004601: peroxidase activity3.71E-02
77GO:0050660: flavin adenine dinucleotide binding4.12E-02
78GO:0008233: peptidase activity4.27E-02
79GO:0052689: carboxylic ester hydrolase activity4.64E-02
80GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.91E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol3.89E-04
2GO:0000781: chromosome, telomeric region4.15E-04
3GO:0005801: cis-Golgi network7.68E-04
4GO:0019773: proteasome core complex, alpha-subunit complex1.17E-03
5GO:0005779: integral component of peroxisomal membrane1.17E-03
6GO:0000783: nuclear telomere cap complex1.17E-03
7GO:0005777: peroxisome3.01E-03
8GO:0070469: respiratory chain3.08E-03
9GO:0005839: proteasome core complex3.29E-03
10GO:0005770: late endosome4.60E-03
11GO:0005783: endoplasmic reticulum6.33E-03
12GO:0005743: mitochondrial inner membrane8.03E-03
13GO:0048046: apoplast8.22E-03
14GO:0043231: intracellular membrane-bounded organelle9.53E-03
15GO:0005819: spindle1.03E-02
16GO:0005789: endoplasmic reticulum membrane1.06E-02
17GO:0005794: Golgi apparatus1.10E-02
18GO:0031966: mitochondrial membrane1.37E-02
19GO:0000502: proteasome complex1.44E-02
20GO:0022626: cytosolic ribosome1.47E-02
21GO:0005635: nuclear envelope1.51E-02
22GO:0010287: plastoglobule2.08E-02
23GO:0005623: cell2.20E-02
24GO:0009524: phragmoplast2.24E-02
25GO:0009705: plant-type vacuole membrane2.72E-02
26GO:0005618: cell wall3.51E-02
27GO:0009505: plant-type cell wall3.90E-02
28GO:0031969: chloroplast membrane4.32E-02
Gene type



Gene DE type