GO Enrichment Analysis of Co-expressed Genes with
AT5G35970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0046677: response to antibiotic | 0.00E+00 |
| 4 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 5 | GO:0009661: chromoplast organization | 0.00E+00 |
| 6 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 7 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 8 | GO:0070584: mitochondrion morphogenesis | 0.00E+00 |
| 9 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 10 | GO:0015970: guanosine tetraphosphate biosynthetic process | 0.00E+00 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 7.44E-08 |
| 12 | GO:0010114: response to red light | 3.85E-07 |
| 13 | GO:0015979: photosynthesis | 4.22E-06 |
| 14 | GO:0009637: response to blue light | 7.41E-06 |
| 15 | GO:0050821: protein stabilization | 5.73E-05 |
| 16 | GO:0010218: response to far red light | 1.32E-04 |
| 17 | GO:0050684: regulation of mRNA processing | 2.36E-04 |
| 18 | GO:0009915: phloem sucrose loading | 2.36E-04 |
| 19 | GO:0042548: regulation of photosynthesis, light reaction | 2.36E-04 |
| 20 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 2.36E-04 |
| 21 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.36E-04 |
| 22 | GO:0051262: protein tetramerization | 2.36E-04 |
| 23 | GO:0009658: chloroplast organization | 2.67E-04 |
| 24 | GO:0009723: response to ethylene | 3.38E-04 |
| 25 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.58E-04 |
| 26 | GO:0090153: regulation of sphingolipid biosynthetic process | 3.92E-04 |
| 27 | GO:0048575: short-day photoperiodism, flowering | 3.92E-04 |
| 28 | GO:0055114: oxidation-reduction process | 4.24E-04 |
| 29 | GO:0044211: CTP salvage | 5.64E-04 |
| 30 | GO:0009765: photosynthesis, light harvesting | 7.50E-04 |
| 31 | GO:2000306: positive regulation of photomorphogenesis | 7.50E-04 |
| 32 | GO:0044206: UMP salvage | 7.50E-04 |
| 33 | GO:0015846: polyamine transport | 7.50E-04 |
| 34 | GO:0016120: carotene biosynthetic process | 9.47E-04 |
| 35 | GO:0043097: pyrimidine nucleoside salvage | 9.47E-04 |
| 36 | GO:0016123: xanthophyll biosynthetic process | 9.47E-04 |
| 37 | GO:0007623: circadian rhythm | 1.06E-03 |
| 38 | GO:0045962: positive regulation of development, heterochronic | 1.16E-03 |
| 39 | GO:0006206: pyrimidine nucleobase metabolic process | 1.16E-03 |
| 40 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.16E-03 |
| 41 | GO:0009643: photosynthetic acclimation | 1.16E-03 |
| 42 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.16E-03 |
| 43 | GO:0071470: cellular response to osmotic stress | 1.38E-03 |
| 44 | GO:0010189: vitamin E biosynthetic process | 1.38E-03 |
| 45 | GO:0000245: spliceosomal complex assembly | 1.38E-03 |
| 46 | GO:0018298: protein-chromophore linkage | 1.44E-03 |
| 47 | GO:1900056: negative regulation of leaf senescence | 1.62E-03 |
| 48 | GO:0080186: developmental vegetative growth | 1.62E-03 |
| 49 | GO:0009769: photosynthesis, light harvesting in photosystem II | 1.62E-03 |
| 50 | GO:0009645: response to low light intensity stimulus | 1.62E-03 |
| 51 | GO:0051510: regulation of unidimensional cell growth | 1.62E-03 |
| 52 | GO:0009416: response to light stimulus | 1.62E-03 |
| 53 | GO:0009910: negative regulation of flower development | 1.65E-03 |
| 54 | GO:0071482: cellular response to light stimulus | 2.14E-03 |
| 55 | GO:0007186: G-protein coupled receptor signaling pathway | 2.14E-03 |
| 56 | GO:0009657: plastid organization | 2.14E-03 |
| 57 | GO:0010100: negative regulation of photomorphogenesis | 2.14E-03 |
| 58 | GO:0010099: regulation of photomorphogenesis | 2.14E-03 |
| 59 | GO:0009640: photomorphogenesis | 2.32E-03 |
| 60 | GO:0048507: meristem development | 2.41E-03 |
| 61 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.70E-03 |
| 62 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.70E-03 |
| 63 | GO:0008356: asymmetric cell division | 2.70E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 3.00E-03 |
| 65 | GO:0009641: shade avoidance | 3.00E-03 |
| 66 | GO:0015770: sucrose transport | 3.31E-03 |
| 67 | GO:0030148: sphingolipid biosynthetic process | 3.31E-03 |
| 68 | GO:0046856: phosphatidylinositol dephosphorylation | 3.31E-03 |
| 69 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.63E-03 |
| 70 | GO:0006629: lipid metabolic process | 3.92E-03 |
| 71 | GO:2000028: regulation of photoperiodism, flowering | 3.95E-03 |
| 72 | GO:0018107: peptidyl-threonine phosphorylation | 3.95E-03 |
| 73 | GO:0009718: anthocyanin-containing compound biosynthetic process | 3.95E-03 |
| 74 | GO:0009887: animal organ morphogenesis | 4.30E-03 |
| 75 | GO:0009624: response to nematode | 4.42E-03 |
| 76 | GO:0006468: protein phosphorylation | 4.56E-03 |
| 77 | GO:0005985: sucrose metabolic process | 4.64E-03 |
| 78 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.00E-03 |
| 79 | GO:0006289: nucleotide-excision repair | 5.37E-03 |
| 80 | GO:0006874: cellular calcium ion homeostasis | 5.75E-03 |
| 81 | GO:0009269: response to desiccation | 6.14E-03 |
| 82 | GO:0003333: amino acid transmembrane transport | 6.14E-03 |
| 83 | GO:0048511: rhythmic process | 6.14E-03 |
| 84 | GO:0010017: red or far-red light signaling pathway | 6.54E-03 |
| 85 | GO:0009686: gibberellin biosynthetic process | 6.94E-03 |
| 86 | GO:0070417: cellular response to cold | 7.78E-03 |
| 87 | GO:0010305: leaf vascular tissue pattern formation | 8.65E-03 |
| 88 | GO:0010182: sugar mediated signaling pathway | 8.65E-03 |
| 89 | GO:0009741: response to brassinosteroid | 8.65E-03 |
| 90 | GO:0006814: sodium ion transport | 9.10E-03 |
| 91 | GO:0009791: post-embryonic development | 9.56E-03 |
| 92 | GO:0008654: phospholipid biosynthetic process | 9.56E-03 |
| 93 | GO:0006970: response to osmotic stress | 1.27E-02 |
| 94 | GO:0048366: leaf development | 1.39E-02 |
| 95 | GO:0080167: response to karrikin | 1.47E-02 |
| 96 | GO:0044550: secondary metabolite biosynthetic process | 1.59E-02 |
| 97 | GO:0010311: lateral root formation | 1.62E-02 |
| 98 | GO:0006811: ion transport | 1.68E-02 |
| 99 | GO:0048527: lateral root development | 1.74E-02 |
| 100 | GO:0006865: amino acid transport | 1.80E-02 |
| 101 | GO:0034599: cellular response to oxidative stress | 1.91E-02 |
| 102 | GO:0051707: response to other organism | 2.22E-02 |
| 103 | GO:0048364: root development | 2.26E-02 |
| 104 | GO:0009644: response to high light intensity | 2.35E-02 |
| 105 | GO:0009965: leaf morphogenesis | 2.41E-02 |
| 106 | GO:0006812: cation transport | 2.61E-02 |
| 107 | GO:0009585: red, far-red light phototransduction | 2.75E-02 |
| 108 | GO:0006417: regulation of translation | 2.95E-02 |
| 109 | GO:0009909: regulation of flower development | 2.95E-02 |
| 110 | GO:0006351: transcription, DNA-templated | 3.23E-02 |
| 111 | GO:0009740: gibberellic acid mediated signaling pathway | 3.38E-02 |
| 112 | GO:0018105: peptidyl-serine phosphorylation | 3.61E-02 |
| 113 | GO:0006396: RNA processing | 3.61E-02 |
| 114 | GO:0009742: brassinosteroid mediated signaling pathway | 3.68E-02 |
| 115 | GO:0035556: intracellular signal transduction | 4.05E-02 |
| 116 | GO:0009058: biosynthetic process | 4.30E-02 |
| 117 | GO:0009845: seed germination | 4.38E-02 |
| 118 | GO:0009790: embryo development | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 4 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 5 | GO:0009899: ent-kaurene synthase activity | 0.00E+00 |
| 6 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 7 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 8 | GO:0005227: calcium activated cation channel activity | 1.00E-04 |
| 9 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.00E-04 |
| 10 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.00E-04 |
| 11 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.00E-04 |
| 12 | GO:0008158: hedgehog receptor activity | 1.00E-04 |
| 13 | GO:0004672: protein kinase activity | 1.02E-04 |
| 14 | GO:0016630: protochlorophyllide reductase activity | 2.36E-04 |
| 15 | GO:0008728: GTP diphosphokinase activity | 2.36E-04 |
| 16 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 2.36E-04 |
| 17 | GO:0031409: pigment binding | 2.91E-04 |
| 18 | GO:0004180: carboxypeptidase activity | 3.92E-04 |
| 19 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.92E-04 |
| 20 | GO:0016805: dipeptidase activity | 3.92E-04 |
| 21 | GO:0015203: polyamine transmembrane transporter activity | 5.64E-04 |
| 22 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 5.64E-04 |
| 23 | GO:0004930: G-protein coupled receptor activity | 7.50E-04 |
| 24 | GO:0070628: proteasome binding | 7.50E-04 |
| 25 | GO:0004845: uracil phosphoribosyltransferase activity | 7.50E-04 |
| 26 | GO:0051538: 3 iron, 4 sulfur cluster binding | 9.47E-04 |
| 27 | GO:0031593: polyubiquitin binding | 1.16E-03 |
| 28 | GO:0004462: lactoylglutathione lyase activity | 1.16E-03 |
| 29 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.16E-03 |
| 30 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.16E-03 |
| 31 | GO:0016168: chlorophyll binding | 1.17E-03 |
| 32 | GO:0005261: cation channel activity | 1.38E-03 |
| 33 | GO:0004849: uridine kinase activity | 1.38E-03 |
| 34 | GO:0004602: glutathione peroxidase activity | 1.38E-03 |
| 35 | GO:0008506: sucrose:proton symporter activity | 1.62E-03 |
| 36 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.14E-03 |
| 37 | GO:0071949: FAD binding | 2.41E-03 |
| 38 | GO:0000989: transcription factor activity, transcription factor binding | 2.41E-03 |
| 39 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.51E-03 |
| 40 | GO:0015293: symporter activity | 2.61E-03 |
| 41 | GO:0015174: basic amino acid transmembrane transporter activity | 2.70E-03 |
| 42 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 3.00E-03 |
| 43 | GO:0008515: sucrose transmembrane transporter activity | 3.31E-03 |
| 44 | GO:0047372: acylglycerol lipase activity | 3.31E-03 |
| 45 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.63E-03 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.95E-03 |
| 47 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.95E-03 |
| 48 | GO:0046872: metal ion binding | 4.61E-03 |
| 49 | GO:0005217: intracellular ligand-gated ion channel activity | 4.64E-03 |
| 50 | GO:0004970: ionotropic glutamate receptor activity | 4.64E-03 |
| 51 | GO:0004190: aspartic-type endopeptidase activity | 4.64E-03 |
| 52 | GO:0043130: ubiquitin binding | 5.37E-03 |
| 53 | GO:0003954: NADH dehydrogenase activity | 5.37E-03 |
| 54 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 5.67E-03 |
| 55 | GO:0005216: ion channel activity | 5.75E-03 |
| 56 | GO:0004176: ATP-dependent peptidase activity | 6.14E-03 |
| 57 | GO:0015144: carbohydrate transmembrane transporter activity | 6.60E-03 |
| 58 | GO:0015297: antiporter activity | 7.27E-03 |
| 59 | GO:0003727: single-stranded RNA binding | 7.35E-03 |
| 60 | GO:0008514: organic anion transmembrane transporter activity | 7.35E-03 |
| 61 | GO:0005351: sugar:proton symporter activity | 7.44E-03 |
| 62 | GO:0019901: protein kinase binding | 9.56E-03 |
| 63 | GO:0003684: damaged DNA binding | 1.15E-02 |
| 64 | GO:0008233: peptidase activity | 1.44E-02 |
| 65 | GO:0004674: protein serine/threonine kinase activity | 1.73E-02 |
| 66 | GO:0005506: iron ion binding | 1.95E-02 |
| 67 | GO:0043621: protein self-association | 2.35E-02 |
| 68 | GO:0016301: kinase activity | 2.36E-02 |
| 69 | GO:0016491: oxidoreductase activity | 2.80E-02 |
| 70 | GO:0016298: lipase activity | 2.81E-02 |
| 71 | GO:0015171: amino acid transmembrane transporter activity | 2.95E-02 |
| 72 | GO:0008289: lipid binding | 3.02E-02 |
| 73 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.31E-02 |
| 74 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.31E-02 |
| 75 | GO:0016874: ligase activity | 3.38E-02 |
| 76 | GO:0015035: protein disulfide oxidoreductase activity | 3.61E-02 |
| 77 | GO:0016829: lyase activity | 4.38E-02 |
| 78 | GO:0005524: ATP binding | 4.44E-02 |
| 79 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009535: chloroplast thylakoid membrane | 9.12E-08 |
| 2 | GO:0009941: chloroplast envelope | 3.32E-06 |
| 3 | GO:0009507: chloroplast | 2.15E-05 |
| 4 | GO:0009534: chloroplast thylakoid | 6.76E-05 |
| 5 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.36E-04 |
| 6 | GO:0042651: thylakoid membrane | 3.58E-04 |
| 7 | GO:0031969: chloroplast membrane | 3.77E-04 |
| 8 | GO:0016605: PML body | 3.92E-04 |
| 9 | GO:0010287: plastoglobule | 6.66E-04 |
| 10 | GO:0009522: photosystem I | 6.86E-04 |
| 11 | GO:0009523: photosystem II | 7.34E-04 |
| 12 | GO:0009517: PSII associated light-harvesting complex II | 7.50E-04 |
| 13 | GO:0030660: Golgi-associated vesicle membrane | 7.50E-04 |
| 14 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 7.50E-04 |
| 15 | GO:0009538: photosystem I reaction center | 1.87E-03 |
| 16 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.87E-03 |
| 17 | GO:0016021: integral component of membrane | 2.08E-03 |
| 18 | GO:0009579: thylakoid | 2.13E-03 |
| 19 | GO:0016604: nuclear body | 2.70E-03 |
| 20 | GO:0009570: chloroplast stroma | 3.19E-03 |
| 21 | GO:0005765: lysosomal membrane | 3.31E-03 |
| 22 | GO:0016607: nuclear speck | 3.79E-03 |
| 23 | GO:0009706: chloroplast inner membrane | 4.42E-03 |
| 24 | GO:0030076: light-harvesting complex | 4.64E-03 |
| 25 | GO:0016020: membrane | 6.05E-03 |
| 26 | GO:0005789: endoplasmic reticulum membrane | 8.98E-03 |
| 27 | GO:0009707: chloroplast outer membrane | 1.57E-02 |
| 28 | GO:0005887: integral component of plasma membrane | 2.94E-02 |
| 29 | GO:0010008: endosome membrane | 3.17E-02 |
| 30 | GO:0005834: heterotrimeric G-protein complex | 3.24E-02 |