GO Enrichment Analysis of Co-expressed Genes with
AT5G35790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0045176: apical protein localization | 0.00E+00 |
| 4 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 5 | GO:0042493: response to drug | 0.00E+00 |
| 6 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 7 | GO:0071482: cellular response to light stimulus | 1.09E-04 |
| 8 | GO:0034337: RNA folding | 1.31E-04 |
| 9 | GO:0006427: histidyl-tRNA aminoacylation | 1.31E-04 |
| 10 | GO:0070509: calcium ion import | 1.31E-04 |
| 11 | GO:0007263: nitric oxide mediated signal transduction | 1.31E-04 |
| 12 | GO:0000481: maturation of 5S rRNA | 1.31E-04 |
| 13 | GO:0042371: vitamin K biosynthetic process | 1.31E-04 |
| 14 | GO:0048829: root cap development | 1.92E-04 |
| 15 | GO:0009773: photosynthetic electron transport in photosystem I | 2.24E-04 |
| 16 | GO:0010024: phytochromobilin biosynthetic process | 3.03E-04 |
| 17 | GO:0006898: receptor-mediated endocytosis | 3.03E-04 |
| 18 | GO:0034755: iron ion transmembrane transport | 3.03E-04 |
| 19 | GO:0010115: regulation of abscisic acid biosynthetic process | 3.03E-04 |
| 20 | GO:0001736: establishment of planar polarity | 3.03E-04 |
| 21 | GO:0010143: cutin biosynthetic process | 3.34E-04 |
| 22 | GO:0006833: water transport | 4.19E-04 |
| 23 | GO:0006557: S-adenosylmethioninamine biosynthetic process | 4.99E-04 |
| 24 | GO:0006788: heme oxidation | 4.99E-04 |
| 25 | GO:0016045: detection of bacterium | 4.99E-04 |
| 26 | GO:0010359: regulation of anion channel activity | 4.99E-04 |
| 27 | GO:0003333: amino acid transmembrane transport | 5.61E-04 |
| 28 | GO:0051639: actin filament network formation | 7.14E-04 |
| 29 | GO:0009152: purine ribonucleotide biosynthetic process | 7.14E-04 |
| 30 | GO:0046653: tetrahydrofolate metabolic process | 7.14E-04 |
| 31 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 7.14E-04 |
| 32 | GO:0009800: cinnamic acid biosynthetic process | 7.14E-04 |
| 33 | GO:0009650: UV protection | 7.14E-04 |
| 34 | GO:2001141: regulation of RNA biosynthetic process | 7.14E-04 |
| 35 | GO:0015979: photosynthesis | 8.10E-04 |
| 36 | GO:0034220: ion transmembrane transport | 8.42E-04 |
| 37 | GO:0051764: actin crosslink formation | 9.47E-04 |
| 38 | GO:0006564: L-serine biosynthetic process | 1.20E-03 |
| 39 | GO:0006461: protein complex assembly | 1.20E-03 |
| 40 | GO:0006751: glutathione catabolic process | 1.47E-03 |
| 41 | GO:0048827: phyllome development | 1.47E-03 |
| 42 | GO:0042549: photosystem II stabilization | 1.47E-03 |
| 43 | GO:0000470: maturation of LSU-rRNA | 1.47E-03 |
| 44 | GO:0006559: L-phenylalanine catabolic process | 1.47E-03 |
| 45 | GO:0010190: cytochrome b6f complex assembly | 1.47E-03 |
| 46 | GO:0006596: polyamine biosynthetic process | 1.47E-03 |
| 47 | GO:0006561: proline biosynthetic process | 1.47E-03 |
| 48 | GO:0048759: xylem vessel member cell differentiation | 1.47E-03 |
| 49 | GO:0042372: phylloquinone biosynthetic process | 1.76E-03 |
| 50 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.76E-03 |
| 51 | GO:1900056: negative regulation of leaf senescence | 2.06E-03 |
| 52 | GO:0048564: photosystem I assembly | 2.39E-03 |
| 53 | GO:0032508: DNA duplex unwinding | 2.39E-03 |
| 54 | GO:0006865: amino acid transport | 2.48E-03 |
| 55 | GO:0009657: plastid organization | 2.73E-03 |
| 56 | GO:0032544: plastid translation | 2.73E-03 |
| 57 | GO:0009416: response to light stimulus | 2.83E-03 |
| 58 | GO:0009658: chloroplast organization | 2.90E-03 |
| 59 | GO:0030001: metal ion transport | 2.94E-03 |
| 60 | GO:0006098: pentose-phosphate shunt | 3.08E-03 |
| 61 | GO:0010206: photosystem II repair | 3.08E-03 |
| 62 | GO:0000373: Group II intron splicing | 3.08E-03 |
| 63 | GO:0009926: auxin polar transport | 3.32E-03 |
| 64 | GO:0009688: abscisic acid biosynthetic process | 3.84E-03 |
| 65 | GO:0006855: drug transmembrane transport | 3.87E-03 |
| 66 | GO:0006810: transport | 4.04E-03 |
| 67 | GO:0052544: defense response by callose deposition in cell wall | 4.24E-03 |
| 68 | GO:0006879: cellular iron ion homeostasis | 4.24E-03 |
| 69 | GO:0006352: DNA-templated transcription, initiation | 4.24E-03 |
| 70 | GO:0009750: response to fructose | 4.24E-03 |
| 71 | GO:0048765: root hair cell differentiation | 4.24E-03 |
| 72 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.65E-03 |
| 73 | GO:0006094: gluconeogenesis | 5.08E-03 |
| 74 | GO:0010628: positive regulation of gene expression | 5.08E-03 |
| 75 | GO:0010229: inflorescence development | 5.08E-03 |
| 76 | GO:0010540: basipetal auxin transport | 5.52E-03 |
| 77 | GO:0009624: response to nematode | 6.35E-03 |
| 78 | GO:0051017: actin filament bundle assembly | 6.91E-03 |
| 79 | GO:0007017: microtubule-based process | 7.40E-03 |
| 80 | GO:0006825: copper ion transport | 7.40E-03 |
| 81 | GO:0048511: rhythmic process | 7.91E-03 |
| 82 | GO:0009414: response to water deprivation | 7.97E-03 |
| 83 | GO:0009411: response to UV | 8.95E-03 |
| 84 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.00E-02 |
| 85 | GO:0042335: cuticle development | 1.06E-02 |
| 86 | GO:0042391: regulation of membrane potential | 1.06E-02 |
| 87 | GO:0010087: phloem or xylem histogenesis | 1.06E-02 |
| 88 | GO:0009958: positive gravitropism | 1.12E-02 |
| 89 | GO:0010182: sugar mediated signaling pathway | 1.12E-02 |
| 90 | GO:0042752: regulation of circadian rhythm | 1.18E-02 |
| 91 | GO:0048825: cotyledon development | 1.24E-02 |
| 92 | GO:0071554: cell wall organization or biogenesis | 1.30E-02 |
| 93 | GO:0030163: protein catabolic process | 1.42E-02 |
| 94 | GO:0071281: cellular response to iron ion | 1.42E-02 |
| 95 | GO:0009911: positive regulation of flower development | 1.68E-02 |
| 96 | GO:0001666: response to hypoxia | 1.68E-02 |
| 97 | GO:0010027: thylakoid membrane organization | 1.68E-02 |
| 98 | GO:0042254: ribosome biogenesis | 1.74E-02 |
| 99 | GO:0016311: dephosphorylation | 1.96E-02 |
| 100 | GO:0009723: response to ethylene | 1.97E-02 |
| 101 | GO:0010311: lateral root formation | 2.11E-02 |
| 102 | GO:0046777: protein autophosphorylation | 2.26E-02 |
| 103 | GO:0009853: photorespiration | 2.41E-02 |
| 104 | GO:0009637: response to blue light | 2.41E-02 |
| 105 | GO:0007165: signal transduction | 2.48E-02 |
| 106 | GO:0009737: response to abscisic acid | 2.57E-02 |
| 107 | GO:0006839: mitochondrial transport | 2.64E-02 |
| 108 | GO:0010114: response to red light | 2.88E-02 |
| 109 | GO:0032259: methylation | 2.99E-02 |
| 110 | GO:0016042: lipid catabolic process | 3.04E-02 |
| 111 | GO:0042538: hyperosmotic salinity response | 3.39E-02 |
| 112 | GO:0006364: rRNA processing | 3.56E-02 |
| 113 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.65E-02 |
| 114 | GO:0006096: glycolytic process | 4.01E-02 |
| 115 | GO:0009626: plant-type hypersensitive response | 4.20E-02 |
| 116 | GO:0009734: auxin-activated signaling pathway | 4.39E-02 |
| 117 | GO:0009409: response to cold | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 2 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 3 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0005528: FK506 binding | 2.96E-07 |
| 7 | GO:0010328: auxin influx transmembrane transporter activity | 1.44E-05 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.60E-05 |
| 9 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.31E-04 |
| 10 | GO:0004821: histidine-tRNA ligase activity | 1.31E-04 |
| 11 | GO:0016768: spermine synthase activity | 1.31E-04 |
| 12 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 1.31E-04 |
| 13 | GO:0004871: signal transducer activity | 1.50E-04 |
| 14 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.03E-04 |
| 15 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.03E-04 |
| 16 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.03E-04 |
| 17 | GO:0008864: formyltetrahydrofolate deformylase activity | 4.99E-04 |
| 18 | GO:0004014: adenosylmethionine decarboxylase activity | 4.99E-04 |
| 19 | GO:0050734: hydroxycinnamoyltransferase activity | 4.99E-04 |
| 20 | GO:0045548: phenylalanine ammonia-lyase activity | 4.99E-04 |
| 21 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 4.99E-04 |
| 22 | GO:0005215: transporter activity | 6.09E-04 |
| 23 | GO:0001872: (1->3)-beta-D-glucan binding | 7.14E-04 |
| 24 | GO:0001053: plastid sigma factor activity | 9.47E-04 |
| 25 | GO:0010011: auxin binding | 9.47E-04 |
| 26 | GO:0016987: sigma factor activity | 9.47E-04 |
| 27 | GO:0004392: heme oxygenase (decyclizing) activity | 9.47E-04 |
| 28 | GO:0019843: rRNA binding | 1.12E-03 |
| 29 | GO:0016791: phosphatase activity | 1.33E-03 |
| 30 | GO:0004332: fructose-bisphosphate aldolase activity | 1.47E-03 |
| 31 | GO:0004629: phospholipase C activity | 1.47E-03 |
| 32 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.47E-03 |
| 33 | GO:0016208: AMP binding | 1.47E-03 |
| 34 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.47E-03 |
| 35 | GO:0015250: water channel activity | 1.58E-03 |
| 36 | GO:0005242: inward rectifier potassium channel activity | 1.76E-03 |
| 37 | GO:0005261: cation channel activity | 1.76E-03 |
| 38 | GO:0004435: phosphatidylinositol phospholipase C activity | 1.76E-03 |
| 39 | GO:0015238: drug transmembrane transporter activity | 2.15E-03 |
| 40 | GO:0043022: ribosome binding | 2.39E-03 |
| 41 | GO:0003993: acid phosphatase activity | 2.70E-03 |
| 42 | GO:0005381: iron ion transmembrane transporter activity | 3.46E-03 |
| 43 | GO:0015293: symporter activity | 3.73E-03 |
| 44 | GO:0004864: protein phosphatase inhibitor activity | 3.84E-03 |
| 45 | GO:0015386: potassium:proton antiporter activity | 4.24E-03 |
| 46 | GO:0015171: amino acid transmembrane transporter activity | 4.95E-03 |
| 47 | GO:0005262: calcium channel activity | 5.08E-03 |
| 48 | GO:0004565: beta-galactosidase activity | 5.08E-03 |
| 49 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.08E-03 |
| 50 | GO:0004722: protein serine/threonine phosphatase activity | 5.38E-03 |
| 51 | GO:0030552: cAMP binding | 5.97E-03 |
| 52 | GO:0030553: cGMP binding | 5.97E-03 |
| 53 | GO:0005216: ion channel activity | 7.40E-03 |
| 54 | GO:0015079: potassium ion transmembrane transporter activity | 7.40E-03 |
| 55 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.02E-02 |
| 56 | GO:0015297: antiporter activity | 1.05E-02 |
| 57 | GO:0030551: cyclic nucleotide binding | 1.06E-02 |
| 58 | GO:0004872: receptor activity | 1.24E-02 |
| 59 | GO:0004518: nuclease activity | 1.36E-02 |
| 60 | GO:0051015: actin filament binding | 1.42E-02 |
| 61 | GO:0005200: structural constituent of cytoskeleton | 1.55E-02 |
| 62 | GO:0016413: O-acetyltransferase activity | 1.62E-02 |
| 63 | GO:0016597: amino acid binding | 1.62E-02 |
| 64 | GO:0008168: methyltransferase activity | 1.64E-02 |
| 65 | GO:0016788: hydrolase activity, acting on ester bonds | 1.74E-02 |
| 66 | GO:0030247: polysaccharide binding | 1.89E-02 |
| 67 | GO:0004721: phosphoprotein phosphatase activity | 1.89E-02 |
| 68 | GO:0008236: serine-type peptidase activity | 1.96E-02 |
| 69 | GO:0003735: structural constituent of ribosome | 2.32E-02 |
| 70 | GO:0052689: carboxylic ester hydrolase activity | 2.34E-02 |
| 71 | GO:0003723: RNA binding | 2.74E-02 |
| 72 | GO:0005509: calcium ion binding | 2.84E-02 |
| 73 | GO:0004185: serine-type carboxypeptidase activity | 2.88E-02 |
| 74 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.05E-02 |
| 75 | GO:0051287: NAD binding | 3.30E-02 |
| 76 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.56E-02 |
| 77 | GO:0022857: transmembrane transporter activity | 4.39E-02 |
| 78 | GO:0016491: oxidoreductase activity | 4.41E-02 |
| 79 | GO:0016746: transferase activity, transferring acyl groups | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.05E-14 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 2.75E-13 |
| 3 | GO:0031977: thylakoid lumen | 7.95E-12 |
| 4 | GO:0009579: thylakoid | 6.60E-10 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 5.92E-09 |
| 6 | GO:0009570: chloroplast stroma | 3.82E-07 |
| 7 | GO:0009941: chloroplast envelope | 1.80E-05 |
| 8 | GO:0009654: photosystem II oxygen evolving complex | 2.11E-05 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 6.70E-05 |
| 10 | GO:0019898: extrinsic component of membrane | 6.86E-05 |
| 11 | GO:0005886: plasma membrane | 2.54E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 3.34E-04 |
| 13 | GO:0031969: chloroplast membrane | 6.63E-04 |
| 14 | GO:0015630: microtubule cytoskeleton | 7.14E-04 |
| 15 | GO:0032432: actin filament bundle | 7.14E-04 |
| 16 | GO:0009534: chloroplast thylakoid | 8.37E-04 |
| 17 | GO:0016020: membrane | 8.63E-04 |
| 18 | GO:0009986: cell surface | 2.06E-03 |
| 19 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.08E-03 |
| 20 | GO:0005884: actin filament | 4.24E-03 |
| 21 | GO:0032040: small-subunit processome | 4.65E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 5.52E-03 |
| 23 | GO:0005840: ribosome | 8.87E-03 |
| 24 | GO:0005887: integral component of plasma membrane | 9.20E-03 |
| 25 | GO:0005770: late endosome | 1.12E-02 |
| 26 | GO:0009523: photosystem II | 1.24E-02 |
| 27 | GO:0046658: anchored component of plasma membrane | 1.46E-02 |
| 28 | GO:0005777: peroxisome | 1.54E-02 |
| 29 | GO:0005778: peroxisomal membrane | 1.55E-02 |
| 30 | GO:0030529: intracellular ribonucleoprotein complex | 1.68E-02 |
| 31 | GO:0015934: large ribosomal subunit | 2.25E-02 |
| 32 | GO:0031225: anchored component of membrane | 2.27E-02 |
| 33 | GO:0010008: endosome membrane | 4.11E-02 |