Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G35630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0005996: monosaccharide metabolic process0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0090393: sepal giant cell development0.00E+00
6GO:0006573: valine metabolic process0.00E+00
7GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
8GO:0051881: regulation of mitochondrial membrane potential0.00E+00
9GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
10GO:0019253: reductive pentose-phosphate cycle2.30E-12
11GO:0006810: transport2.81E-07
12GO:0030388: fructose 1,6-bisphosphate metabolic process3.53E-06
13GO:0006000: fructose metabolic process1.27E-05
14GO:0009773: photosynthetic electron transport in photosystem I2.95E-05
15GO:0018119: peptidyl-cysteine S-nitrosylation2.95E-05
16GO:0009735: response to cytokinin3.54E-05
17GO:0006094: gluconeogenesis4.57E-05
18GO:0009409: response to cold4.96E-05
19GO:0015976: carbon utilization5.13E-05
20GO:0019464: glycine decarboxylation via glycine cleavage system5.13E-05
21GO:0009765: photosynthesis, light harvesting5.13E-05
22GO:2000122: negative regulation of stomatal complex development5.13E-05
23GO:0006546: glycine catabolic process5.13E-05
24GO:0010037: response to carbon dioxide5.13E-05
25GO:0017148: negative regulation of translation1.62E-04
26GO:0015979: photosynthesis1.81E-04
27GO:0052543: callose deposition in cell wall2.69E-04
28GO:0000066: mitochondrial ornithine transport2.77E-04
29GO:0010597: green leaf volatile biosynthetic process2.77E-04
30GO:1901349: glucosinolate transport2.77E-04
31GO:0071370: cellular response to gibberellin stimulus2.77E-04
32GO:0090449: phloem glucosinolate loading2.77E-04
33GO:0006659: phosphatidylserine biosynthetic process2.77E-04
34GO:0006551: leucine metabolic process2.77E-04
35GO:0009791: post-embryonic development3.05E-04
36GO:0006002: fructose 6-phosphate metabolic process3.32E-04
37GO:0006096: glycolytic process4.00E-04
38GO:2000123: positive regulation of stomatal complex development6.09E-04
39GO:0010275: NAD(P)H dehydrogenase complex assembly6.09E-04
40GO:0043039: tRNA aminoacylation6.09E-04
41GO:1902326: positive regulation of chlorophyll biosynthetic process6.09E-04
42GO:1904143: positive regulation of carotenoid biosynthetic process6.09E-04
43GO:0000272: polysaccharide catabolic process6.38E-04
44GO:0009767: photosynthetic electron transport chain8.26E-04
45GO:0005986: sucrose biosynthetic process8.26E-04
46GO:0010207: photosystem II assembly9.28E-04
47GO:0006011: UDP-glucose metabolic process9.88E-04
48GO:0071492: cellular response to UV-A9.88E-04
49GO:0006696: ergosterol biosynthetic process9.88E-04
50GO:0005977: glycogen metabolic process9.88E-04
51GO:0009853: photorespiration1.02E-03
52GO:0005985: sucrose metabolic process1.04E-03
53GO:0046686: response to cadmium ion1.05E-03
54GO:0006839: mitochondrial transport1.19E-03
55GO:0042742: defense response to bacterium1.23E-03
56GO:0009744: response to sucrose1.39E-03
57GO:0009695: jasmonic acid biosynthetic process1.40E-03
58GO:0007231: osmosensory signaling pathway1.41E-03
59GO:0009052: pentose-phosphate shunt, non-oxidative branch1.41E-03
60GO:0033014: tetrapyrrole biosynthetic process1.41E-03
61GO:0051016: barbed-end actin filament capping1.41E-03
62GO:0032877: positive regulation of DNA endoreduplication1.41E-03
63GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.41E-03
64GO:0031408: oxylipin biosynthetic process1.54E-03
65GO:0009617: response to bacterium1.59E-03
66GO:0071486: cellular response to high light intensity1.89E-03
67GO:0045727: positive regulation of translation1.89E-03
68GO:0033500: carbohydrate homeostasis1.89E-03
69GO:2000038: regulation of stomatal complex development1.89E-03
70GO:0006021: inositol biosynthetic process1.89E-03
71GO:0009902: chloroplast relocation1.89E-03
72GO:0034440: lipid oxidation1.89E-03
73GO:0009694: jasmonic acid metabolic process1.89E-03
74GO:0016117: carotenoid biosynthetic process2.16E-03
75GO:0042631: cellular response to water deprivation2.33E-03
76GO:0009658: chloroplast organization2.37E-03
77GO:0016123: xanthophyll biosynthetic process2.41E-03
78GO:0010375: stomatal complex patterning2.41E-03
79GO:0016120: carotene biosynthetic process2.41E-03
80GO:0010236: plastoquinone biosynthetic process2.41E-03
81GO:0043097: pyrimidine nucleoside salvage2.41E-03
82GO:0042549: photosystem II stabilization2.98E-03
83GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.98E-03
84GO:0016554: cytidine to uridine editing2.98E-03
85GO:0010190: cytochrome b6f complex assembly2.98E-03
86GO:0009117: nucleotide metabolic process2.98E-03
87GO:0006206: pyrimidine nucleobase metabolic process2.98E-03
88GO:0010942: positive regulation of cell death2.98E-03
89GO:0042545: cell wall modification3.07E-03
90GO:0071554: cell wall organization or biogenesis3.09E-03
91GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.58E-03
92GO:0009082: branched-chain amino acid biosynthetic process3.58E-03
93GO:1901259: chloroplast rRNA processing3.58E-03
94GO:0009099: valine biosynthetic process3.58E-03
95GO:0009854: oxidative photosynthetic carbon pathway3.58E-03
96GO:0009611: response to wounding4.03E-03
97GO:0080027: response to herbivore4.23E-03
98GO:0007155: cell adhesion4.90E-03
99GO:0008610: lipid biosynthetic process4.90E-03
100GO:0045010: actin nucleation4.90E-03
101GO:0071482: cellular response to light stimulus5.62E-03
102GO:0022900: electron transport chain5.62E-03
103GO:0006075: (1->3)-beta-D-glucan biosynthetic process5.62E-03
104GO:0009097: isoleucine biosynthetic process5.62E-03
105GO:0009657: plastid organization5.62E-03
106GO:0032544: plastid translation5.62E-03
107GO:0009817: defense response to fungus, incompatible interaction5.83E-03
108GO:0018298: protein-chromophore linkage5.83E-03
109GO:0010206: photosystem II repair6.37E-03
110GO:0006098: pentose-phosphate shunt6.37E-03
111GO:0006783: heme biosynthetic process6.37E-03
112GO:0006754: ATP biosynthetic process6.37E-03
113GO:0048589: developmental growth6.37E-03
114GO:0045490: pectin catabolic process6.39E-03
115GO:0010119: regulation of stomatal movement6.75E-03
116GO:0008152: metabolic process6.91E-03
117GO:0006779: porphyrin-containing compound biosynthetic process7.15E-03
118GO:1900865: chloroplast RNA modification7.15E-03
119GO:0016051: carbohydrate biosynthetic process7.40E-03
120GO:0006259: DNA metabolic process7.97E-03
121GO:0043069: negative regulation of programmed cell death7.97E-03
122GO:0045036: protein targeting to chloroplast7.97E-03
123GO:0006631: fatty acid metabolic process8.79E-03
124GO:0019684: photosynthesis, light reaction8.82E-03
125GO:0006816: calcium ion transport8.82E-03
126GO:0006265: DNA topological change8.82E-03
127GO:0043085: positive regulation of catalytic activity8.82E-03
128GO:0006415: translational termination8.82E-03
129GO:0006790: sulfur compound metabolic process9.70E-03
130GO:0009725: response to hormone1.06E-02
131GO:0006006: glucose metabolic process1.06E-02
132GO:0030036: actin cytoskeleton organization1.06E-02
133GO:0050826: response to freezing1.06E-02
134GO:0070588: calcium ion transmembrane transport1.25E-02
135GO:0046854: phosphatidylinositol phosphorylation1.25E-02
136GO:0006833: water transport1.35E-02
137GO:0006636: unsaturated fatty acid biosynthetic process1.35E-02
138GO:0009416: response to light stimulus1.42E-02
139GO:0007010: cytoskeleton organization1.46E-02
140GO:0080167: response to karrikin1.47E-02
141GO:0006418: tRNA aminoacylation for protein translation1.56E-02
142GO:0009768: photosynthesis, light harvesting in photosystem I1.56E-02
143GO:0061077: chaperone-mediated protein folding1.67E-02
144GO:0080092: regulation of pollen tube growth1.78E-02
145GO:0009294: DNA mediated transformation1.89E-02
146GO:0009742: brassinosteroid mediated signaling pathway1.95E-02
147GO:0006284: base-excision repair2.01E-02
148GO:0000271: polysaccharide biosynthetic process2.25E-02
149GO:0080022: primary root development2.25E-02
150GO:0034220: ion transmembrane transport2.25E-02
151GO:0009741: response to brassinosteroid2.37E-02
152GO:0008360: regulation of cell shape2.37E-02
153GO:0045489: pectin biosynthetic process2.37E-02
154GO:0006662: glycerol ether metabolic process2.37E-02
155GO:0007059: chromosome segregation2.50E-02
156GO:0009646: response to absence of light2.50E-02
157GO:0019252: starch biosynthetic process2.63E-02
158GO:0008654: phospholipid biosynthetic process2.63E-02
159GO:0005975: carbohydrate metabolic process2.69E-02
160GO:0032502: developmental process2.89E-02
161GO:0007264: small GTPase mediated signal transduction2.89E-02
162GO:0006633: fatty acid biosynthetic process2.90E-02
163GO:1901657: glycosyl compound metabolic process3.02E-02
164GO:0007267: cell-cell signaling3.30E-02
165GO:0010228: vegetative to reproductive phase transition of meristem3.33E-02
166GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.73E-02
167GO:0009816: defense response to bacterium, incompatible interaction3.73E-02
168GO:0042128: nitrate assimilation3.87E-02
169GO:0048767: root hair elongation4.48E-02
170GO:0000160: phosphorelay signal transduction system4.48E-02
171GO:0055114: oxidation-reduction process4.50E-02
172GO:0009407: toxin catabolic process4.64E-02
173GO:0010218: response to far red light4.64E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0050281: serine-glyoxylate transaminase activity0.00E+00
3GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
4GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
5GO:0008974: phosphoribulokinase activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0004760: serine-pyruvate transaminase activity0.00E+00
8GO:0030795: jasmonate O-methyltransferase activity0.00E+00
9GO:0046905: phytoene synthase activity0.00E+00
10GO:0102078: methyl jasmonate methylesterase activity0.00E+00
11GO:0008465: glycerate dehydrogenase activity0.00E+00
12GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
13GO:0030598: rRNA N-glycosylase activity0.00E+00
14GO:0004618: phosphoglycerate kinase activity3.53E-06
15GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.53E-06
16GO:0004375: glycine dehydrogenase (decarboxylating) activity2.85E-05
17GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.62E-04
18GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.77E-04
19GO:0004560: alpha-L-fucosidase activity2.77E-04
20GO:0080132: fatty acid alpha-hydroxylase activity2.77E-04
21GO:0003984: acetolactate synthase activity2.77E-04
22GO:0004831: tyrosine-tRNA ligase activity2.77E-04
23GO:0004325: ferrochelatase activity2.77E-04
24GO:0051996: squalene synthase activity2.77E-04
25GO:0010313: phytochrome binding2.77E-04
26GO:0090448: glucosinolate:proton symporter activity2.77E-04
27GO:0030941: chloroplast targeting sequence binding2.77E-04
28GO:0010297: heteropolysaccharide binding6.09E-04
29GO:0004047: aminomethyltransferase activity6.09E-04
30GO:0000064: L-ornithine transmembrane transporter activity6.09E-04
31GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.09E-04
32GO:0004512: inositol-3-phosphate synthase activity6.09E-04
33GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity6.09E-04
34GO:0008967: phosphoglycolate phosphatase activity6.09E-04
35GO:0042389: omega-3 fatty acid desaturase activity6.09E-04
36GO:0004089: carbonate dehydratase activity8.26E-04
37GO:0070330: aromatase activity9.88E-04
38GO:0003913: DNA photolyase activity9.88E-04
39GO:0004148: dihydrolipoyl dehydrogenase activity9.88E-04
40GO:0004751: ribose-5-phosphate isomerase activity9.88E-04
41GO:0016165: linoleate 13S-lipoxygenase activity9.88E-04
42GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity9.88E-04
43GO:0005528: FK506 binding1.27E-03
44GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.41E-03
45GO:0001872: (1->3)-beta-D-glucan binding1.41E-03
46GO:0035529: NADH pyrophosphatase activity1.41E-03
47GO:0048027: mRNA 5'-UTR binding1.41E-03
48GO:0016149: translation release factor activity, codon specific1.41E-03
49GO:0051537: 2 iron, 2 sulfur cluster binding1.54E-03
50GO:0051861: glycolipid binding1.89E-03
51GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.89E-03
52GO:0008453: alanine-glyoxylate transaminase activity1.89E-03
53GO:0004659: prenyltransferase activity1.89E-03
54GO:0045330: aspartyl esterase activity2.32E-03
55GO:0008725: DNA-3-methyladenine glycosylase activity2.41E-03
56GO:0018685: alkane 1-monooxygenase activity2.41E-03
57GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.41E-03
58GO:0019901: protein kinase binding2.89E-03
59GO:0030599: pectinesterase activity2.95E-03
60GO:0080030: methyl indole-3-acetate esterase activity2.98E-03
61GO:0004332: fructose-bisphosphate aldolase activity2.98E-03
62GO:0102229: amylopectin maltohydrolase activity2.98E-03
63GO:0042578: phosphoric ester hydrolase activity2.98E-03
64GO:0048038: quinone binding3.09E-03
65GO:0051753: mannan synthase activity3.58E-03
66GO:0004849: uridine kinase activity3.58E-03
67GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.58E-03
68GO:0016161: beta-amylase activity3.58E-03
69GO:0004723: calcium-dependent protein serine/threonine phosphatase activity3.58E-03
70GO:0016413: O-acetyltransferase activity4.23E-03
71GO:0009881: photoreceptor activity4.23E-03
72GO:0043295: glutathione binding4.23E-03
73GO:0016597: amino acid binding4.23E-03
74GO:0019843: rRNA binding4.24E-03
75GO:0016168: chlorophyll binding4.73E-03
76GO:0004564: beta-fructofuranosidase activity4.90E-03
77GO:0008135: translation factor activity, RNA binding5.62E-03
78GO:0003843: 1,3-beta-D-glucan synthase activity5.62E-03
79GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity5.62E-03
80GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water5.62E-03
81GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism6.37E-03
82GO:0003747: translation release factor activity6.37E-03
83GO:0016787: hydrolase activity6.50E-03
84GO:0004575: sucrose alpha-glucosidase activity7.15E-03
85GO:0008047: enzyme activator activity7.97E-03
86GO:0005089: Rho guanyl-nucleotide exchange factor activity8.82E-03
87GO:0004860: protein kinase inhibitor activity8.82E-03
88GO:0005262: calcium channel activity1.06E-02
89GO:0004565: beta-galactosidase activity1.06E-02
90GO:0031072: heat shock protein binding1.06E-02
91GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.12E-02
92GO:0016788: hydrolase activity, acting on ester bonds1.14E-02
93GO:0051287: NAD binding1.16E-02
94GO:0008266: poly(U) RNA binding1.16E-02
95GO:0031409: pigment binding1.35E-02
96GO:0004857: enzyme inhibitor activity1.46E-02
97GO:0003824: catalytic activity1.56E-02
98GO:0022857: transmembrane transporter activity1.73E-02
99GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.78E-02
100GO:0022891: substrate-specific transmembrane transporter activity1.89E-02
101GO:0003756: protein disulfide isomerase activity2.01E-02
102GO:0004812: aminoacyl-tRNA ligase activity2.13E-02
103GO:0047134: protein-disulfide reductase activity2.13E-02
104GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.15E-02
105GO:0016758: transferase activity, transferring hexosyl groups2.25E-02
106GO:0004791: thioredoxin-disulfide reductase activity2.50E-02
107GO:0016853: isomerase activity2.50E-02
108GO:0050662: coenzyme binding2.50E-02
109GO:0004872: receptor activity2.63E-02
110GO:0004518: nuclease activity2.89E-02
111GO:0000156: phosphorelay response regulator activity3.02E-02
112GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.02E-02
113GO:0051015: actin filament binding3.02E-02
114GO:0008483: transaminase activity3.30E-02
115GO:0005200: structural constituent of cytoskeleton3.30E-02
116GO:0005509: calcium ion binding3.58E-02
117GO:0015250: water channel activity3.58E-02
118GO:0009931: calcium-dependent protein serine/threonine kinase activity3.87E-02
119GO:0102483: scopolin beta-glucosidase activity4.02E-02
120GO:0030247: polysaccharide binding4.02E-02
121GO:0004683: calmodulin-dependent protein kinase activity4.02E-02
122GO:0008236: serine-type peptidase activity4.17E-02
123GO:0005515: protein binding4.38E-02
124GO:0004222: metalloendopeptidase activity4.64E-02
125GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.64E-02
126GO:0050897: cobalt ion binding4.79E-02
RankGO TermAdjusted P value
1GO:0009571: proplastid stroma0.00E+00
2GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
3GO:0005948: acetolactate synthase complex0.00E+00
4GO:0009507: chloroplast6.09E-33
5GO:0009535: chloroplast thylakoid membrane2.48E-20
6GO:0009570: chloroplast stroma1.21E-18
7GO:0009941: chloroplast envelope1.70E-13
8GO:0009579: thylakoid5.05E-13
9GO:0010319: stromule1.03E-09
10GO:0048046: apoplast4.64E-09
11GO:0009543: chloroplast thylakoid lumen3.46E-08
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.74E-07
13GO:0009654: photosystem II oxygen evolving complex3.87E-06
14GO:0009534: chloroplast thylakoid1.36E-05
15GO:0005960: glycine cleavage complex2.85E-05
16GO:0030095: chloroplast photosystem II5.55E-05
17GO:0009505: plant-type cell wall1.71E-04
18GO:0009523: photosystem II3.05E-04
19GO:0019898: extrinsic component of membrane3.05E-04
20GO:0000427: plastid-encoded plastid RNA polymerase complex6.09E-04
21GO:0042170: plastid membrane6.09E-04
22GO:0010287: plastoglobule6.94E-04
23GO:0031969: chloroplast membrane7.16E-04
24GO:0031977: thylakoid lumen1.26E-03
25GO:0005775: vacuolar lumen1.41E-03
26GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)1.89E-03
27GO:0055035: plastid thylakoid membrane2.41E-03
28GO:0010168: ER body2.98E-03
29GO:0009295: nucleoid3.98E-03
30GO:0031359: integral component of chloroplast outer membrane4.23E-03
31GO:0009539: photosystem II reaction center5.62E-03
32GO:0000148: 1,3-beta-D-glucan synthase complex5.62E-03
33GO:0009707: chloroplast outer membrane5.83E-03
34GO:0000325: plant-type vacuole6.75E-03
35GO:0016324: apical plasma membrane7.97E-03
36GO:0048471: perinuclear region of cytoplasm8.82E-03
37GO:0046658: anchored component of plasma membrane9.14E-03
38GO:0005618: cell wall9.56E-03
39GO:0000311: plastid large ribosomal subunit9.70E-03
40GO:0009508: plastid chromosome1.06E-02
41GO:0019013: viral nucleocapsid1.06E-02
42GO:0030076: light-harvesting complex1.25E-02
43GO:0005875: microtubule associated complex1.35E-02
44GO:0016020: membrane1.40E-02
45GO:0009706: chloroplast inner membrane1.84E-02
46GO:0005773: vacuole1.86E-02
47GO:0005743: mitochondrial inner membrane2.19E-02
48GO:0009522: photosystem I2.50E-02
49GO:0031225: anchored component of membrane2.75E-02
50GO:0005576: extracellular region3.23E-02
51GO:0005778: peroxisomal membrane3.30E-02
52GO:0015934: large ribosomal subunit4.79E-02
Gene type



Gene DE type