co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G28840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0015809: arginine transport	0.00E+00
3	GO:0080167: response to karrikin	1.96E-05
4	GO:0051555: flavonol biosynthetic process	1.97E-05
5	GO:0019605: butyrate metabolic process	2.88E-05
6	GO:0071454: cellular response to anoxia	2.88E-05
7	GO:0006083: acetate metabolic process	2.88E-05
8	GO:0031539: positive regulation of anthocyanin metabolic process	2.88E-05
9	GO:0080183: response to photooxidative stress	7.28E-05
10	GO:1900386: positive regulation of flavonol biosynthetic process	7.28E-05
11	GO:0080153: negative regulation of reductive pentose-phosphate cycle	7.28E-05
12	GO:0015802: basic amino acid transport	7.28E-05
13	GO:1901562: response to paraquat	1.27E-04
14	GO:0010253: UDP-rhamnose biosynthetic process	1.27E-04
15	GO:0071492: cellular response to UV-A	1.27E-04
16	GO:0040009: regulation of growth rate	1.27E-04
17	GO:0009963: positive regulation of flavonoid biosynthetic process	1.89E-04
18	GO:0042823: pyridoxal phosphate biosynthetic process	1.89E-04
19	GO:0009650: UV protection	1.89E-04
20	GO:0071486: cellular response to high light intensity	2.57E-04
21	GO:0048442: sepal development	2.57E-04
22	GO:0009765: photosynthesis, light harvesting	2.57E-04
23	GO:0006097: glyoxylate cycle	3.30E-04
24	GO:0009435: NAD biosynthetic process	3.30E-04
25	GO:0016094: polyprenol biosynthetic process	3.30E-04
26	GO:0071493: cellular response to UV-B	3.30E-04
27	GO:0019408: dolichol biosynthetic process	3.30E-04
28	GO:0006796: phosphate-containing compound metabolic process	4.06E-04
29	GO:0010304: PSII associated light-harvesting complex II catabolic process	4.06E-04
30	GO:0010315: auxin efflux	4.06E-04
31	GO:0030154: cell differentiation	4.44E-04
32	GO:0010076: maintenance of floral meristem identity	4.86E-04
33	GO:0006629: lipid metabolic process	5.07E-04
34	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.55E-04
35	GO:0010224: response to UV-B	6.71E-04
36	GO:0010099: regulation of photomorphogenesis	7.44E-04
37	GO:0015996: chlorophyll catabolic process	7.44E-04
38	GO:0048441: petal development	1.03E-03
39	GO:0000272: polysaccharide catabolic process	1.13E-03
40	GO:0009698: phenylpropanoid metabolic process	1.13E-03
41	GO:0019253: reductive pentose-phosphate cycle	1.45E-03
42	GO:0034605: cellular response to heat	1.45E-03
43	GO:0048440: carpel development	1.45E-03
44	GO:0009225: nucleotide-sugar metabolic process	1.56E-03
45	GO:0042753: positive regulation of circadian rhythm	1.67E-03
46	GO:0006487: protein N-linked glycosylation	1.79E-03
47	GO:0003333: amino acid transmembrane transport	2.04E-03
48	GO:0019915: lipid storage	2.04E-03
49	GO:0010017: red or far-red light signaling pathway	2.17E-03
50	GO:0042127: regulation of cell proliferation	2.43E-03
51	GO:0048443: stamen development	2.43E-03
52	GO:0070417: cellular response to cold	2.57E-03
53	GO:0009958: positive gravitropism	2.84E-03
54	GO:0010252: auxin homeostasis	3.73E-03
55	GO:0009911: positive regulation of flower development	4.21E-03
56	GO:0048573: photoperiodism, flowering	4.71E-03
57	GO:0010311: lateral root formation	5.22E-03
58	GO:0009813: flavonoid biosynthetic process	5.22E-03
59	GO:0006811: ion transport	5.40E-03
60	GO:0010218: response to far red light	5.40E-03
61	GO:0010119: regulation of stomatal movement	5.58E-03
62	GO:0009640: photomorphogenesis	7.08E-03
63	GO:0010114: response to red light	7.08E-03
64	GO:0009926: auxin polar transport	7.08E-03
65	GO:0009744: response to sucrose	7.08E-03
66	GO:0009416: response to light stimulus	7.51E-03
67	GO:0035556: intracellular signal transduction	7.93E-03
68	GO:0000165: MAPK cascade	8.09E-03
69	GO:0031347: regulation of defense response	8.09E-03
70	GO:0009809: lignin biosynthetic process	8.71E-03
71	GO:0006486: protein glycosylation	8.71E-03
72	GO:0009585: red, far-red light phototransduction	8.71E-03
73	GO:0009909: regulation of flower development	9.36E-03
74	GO:0055085: transmembrane transport	9.54E-03
75	GO:0009740: gibberellic acid mediated signaling pathway	1.07E-02
76	GO:0042545: cell wall modification	1.09E-02
77	GO:0018105: peptidyl-serine phosphorylation	1.14E-02
78	GO:0045490: pectin catabolic process	1.64E-02
79	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	2.12E-02
80	GO:0006970: response to osmotic stress	2.36E-02
81	GO:0009723: response to ethylene	2.48E-02
82	GO:0046777: protein autophosphorylation	2.74E-02
83	GO:0006468: protein phosphorylation	3.30E-02
84	GO:0016042: lipid catabolic process	3.38E-02
85	GO:0009408: response to heat	3.45E-02
86	GO:0008152: metabolic process	3.70E-02
87	GO:0006357: regulation of transcription from RNA polymerase II promoter	4.21E-02
88	GO:0009734: auxin-activated signaling pathway	4.40E-02
89	GO:0009908: flower development	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0047213: anthocyanidin 3-O-glucosyltransferase activity	0.00E+00
2	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
3	GO:0008734: L-aspartate oxidase activity	0.00E+00
4	GO:0047760: butyrate-CoA ligase activity	2.88E-05
5	GO:0003987: acetate-CoA ligase activity	2.88E-05
6	GO:0050377: UDP-glucose 4,6-dehydratase activity	7.28E-05
7	GO:0008460: dTDP-glucose 4,6-dehydratase activity	7.28E-05
8	GO:0010280: UDP-L-rhamnose synthase activity	7.28E-05
9	GO:0046524: sucrose-phosphate synthase activity	1.27E-04
10	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.89E-04
11	GO:0004806: triglyceride lipase activity	2.70E-04
12	GO:0002094: polyprenyltransferase activity	3.30E-04
13	GO:0045547: dehydrodolichyl diphosphate synthase activity	3.30E-04
14	GO:0016208: AMP binding	4.06E-04
15	GO:0008429: phosphatidylethanolamine binding	4.06E-04
16	GO:0016161: beta-amylase activity	4.86E-04
17	GO:0102425: myricetin 3-O-glucosyltransferase activity	5.68E-04
18	GO:0102360: daphnetin 3-O-glucosyltransferase activity	5.68E-04
19	GO:0004427: inorganic diphosphatase activity	5.68E-04
20	GO:0047893: flavonol 3-O-glucosyltransferase activity	6.55E-04
21	GO:0052747: sinapyl alcohol dehydrogenase activity	6.55E-04
22	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	7.44E-04
23	GO:0009672: auxin:proton symporter activity	9.29E-04
24	GO:0015174: basic amino acid transmembrane transporter activity	9.29E-04
25	GO:0047372: acylglycerol lipase activity	1.13E-03
26	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.23E-03
27	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	1.27E-03
28	GO:0010329: auxin efflux transmembrane transporter activity	1.34E-03
29	GO:0046910: pectinesterase inhibitor activity	1.43E-03
30	GO:0008194: UDP-glycosyltransferase activity	1.70E-03
31	GO:0004857: enzyme inhibitor activity	1.79E-03
32	GO:0004176: ATP-dependent peptidase activity	2.04E-03
33	GO:0035251: UDP-glucosyltransferase activity	2.04E-03
34	GO:0022891: substrate-specific transmembrane transporter activity	2.30E-03
35	GO:0016757: transferase activity, transferring glycosyl groups	2.47E-03
36	GO:0003824: catalytic activity	2.80E-03
37	GO:0016853: isomerase activity	2.99E-03
38	GO:0016491: oxidoreductase activity	3.52E-03
39	GO:0008237: metallopeptidase activity	3.89E-03
40	GO:0016168: chlorophyll binding	4.37E-03
41	GO:0008375: acetylglucosaminyltransferase activity	4.54E-03
42	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.54E-03
43	GO:0004683: calmodulin-dependent protein kinase activity	4.71E-03
44	GO:0004222: metalloendopeptidase activity	5.40E-03
45	GO:0015293: symporter activity	7.68E-03
46	GO:0003690: double-stranded DNA binding	8.92E-03
47	GO:0045330: aspartyl esterase activity	9.36E-03
48	GO:0015171: amino acid transmembrane transporter activity	9.36E-03
49	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.00E-02
50	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.05E-02
51	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.05E-02
52	GO:0030599: pectinesterase activity	1.07E-02
53	GO:0016758: transferase activity, transferring hexosyl groups	1.28E-02
54	GO:0015144: carbohydrate transmembrane transporter activity	1.48E-02
55	GO:0005351: sugar:proton symporter activity	1.62E-02
56	GO:0000287: magnesium ion binding	2.21E-02
57	GO:0043531: ADP binding	2.39E-02
58	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.97E-02
59	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.20E-02
60	GO:0016887: ATPase activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.94E-04
2	GO:0043234: protein complex	1.67E-03
3	GO:0009523: photosystem II	3.13E-03
4	GO:0071944: cell periphery	3.58E-03
5	GO:0005774: vacuolar membrane	1.20E-02
6	GO:0010287: plastoglobule	1.26E-02
7	GO:0009536: plastid	1.87E-02
8	GO:0005737: cytoplasm	2.17E-02
9	GO:0005743: mitochondrial inner membrane	3.27E-02
10	GO:0009535: chloroplast thylakoid membrane	3.42E-02
11	GO:0043231: intracellular membrane-bounded organelle	3.70E-02