co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G28290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
3	GO:0032544: plastid translation	1.17E-05
4	GO:0042371: vitamin K biosynthetic process	3.12E-05
5	GO:0051017: actin filament bundle assembly	6.31E-05
6	GO:0090391: granum assembly	1.37E-04
7	GO:0006013: mannose metabolic process	1.37E-04
8	GO:1901332: negative regulation of lateral root development	2.04E-04
9	GO:0051639: actin filament network formation	2.04E-04
10	GO:0009650: UV protection	2.04E-04
11	GO:0010027: thylakoid membrane organization	2.54E-04
12	GO:0051764: actin crosslink formation	2.76E-04
13	GO:0010236: plastoquinone biosynthetic process	3.53E-04
14	GO:0042372: phylloquinone biosynthetic process	5.20E-04
15	GO:0009772: photosynthetic electron transport in photosystem II	6.07E-04
16	GO:0010196: nonphotochemical quenching	6.07E-04
17	GO:0006535: cysteine biosynthetic process from serine	1.10E-03
18	GO:0006006: glucose metabolic process	1.43E-03
19	GO:0019253: reductive pentose-phosphate cycle	1.55E-03
20	GO:0045490: pectin catabolic process	1.69E-03
21	GO:0019344: cysteine biosynthetic process	1.92E-03
22	GO:0009411: response to UV	2.46E-03
23	GO:0000413: protein peptidyl-prolyl isomerization	2.90E-03
24	GO:0042335: cuticle development	2.90E-03
25	GO:0009567: double fertilization forming a zygote and endosperm	4.00E-03
26	GO:0006869: lipid transport	4.19E-03
27	GO:0016042: lipid catabolic process	4.57E-03
28	GO:0009627: systemic acquired resistance	4.87E-03
29	GO:0015995: chlorophyll biosynthetic process	5.05E-03
30	GO:0006412: translation	5.53E-03
31	GO:0010311: lateral root formation	5.60E-03
32	GO:0007568: aging	5.99E-03
33	GO:0016051: carbohydrate biosynthetic process	6.38E-03
34	GO:0006096: glycolytic process	1.05E-02
35	GO:0009740: gibberellic acid mediated signaling pathway	1.15E-02
36	GO:0009790: embryo development	1.57E-02
37	GO:0006633: fatty acid biosynthetic process	1.65E-02
38	GO:0009739: response to gibberellin	1.91E-02
39	GO:0009658: chloroplast organization	2.41E-02
40	GO:0009860: pollen tube growth	2.54E-02
41	GO:0015979: photosynthesis	3.09E-02
42	GO:0045454: cell redox homeostasis	3.19E-02
43	GO:0045892: negative regulation of transcription, DNA-templated	3.23E-02
44	GO:0006281: DNA repair	3.71E-02
45	GO:0016310: phosphorylation	4.14E-02
46	GO:0009734: auxin-activated signaling pathway	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
2	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
3	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	3.12E-05
4	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	7.88E-05
5	GO:0030570: pectate lyase activity	9.66E-05
6	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.37E-04
7	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.37E-04
8	GO:0051015: actin filament binding	1.98E-04
9	GO:0016851: magnesium chelatase activity	2.04E-04
10	GO:0004659: prenyltransferase activity	2.76E-04
11	GO:0004040: amidase activity	3.53E-04
12	GO:0004559: alpha-mannosidase activity	5.20E-04
13	GO:0004124: cysteine synthase activity	5.20E-04
14	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.24E-04
15	GO:0015020: glucuronosyltransferase activity	1.10E-03
16	GO:0019843: rRNA binding	1.24E-03
17	GO:0016829: lyase activity	1.33E-03
18	GO:0005528: FK506 binding	1.92E-03
19	GO:0016788: hydrolase activity, acting on ester bonds	2.64E-03
20	GO:0008080: N-acetyltransferase activity	3.05E-03
21	GO:0052689: carboxylic ester hydrolase activity	3.53E-03
22	GO:0004518: nuclease activity	3.68E-03
23	GO:0008375: acetylglucosaminyltransferase activity	4.87E-03
24	GO:0008289: lipid binding	6.53E-03
25	GO:0003735: structural constituent of ribosome	6.77E-03
26	GO:0050661: NADP binding	6.98E-03
27	GO:0000166: nucleotide binding	8.33E-03
28	GO:0051287: NAD binding	8.68E-03
29	GO:0003777: microtubule motor activity	1.01E-02
30	GO:0030170: pyridoxal phosphate binding	1.51E-02
31	GO:0008017: microtubule binding	1.82E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	3.06E-10
2	GO:0009534: chloroplast thylakoid	8.37E-07
3	GO:0031977: thylakoid lumen	2.06E-05
4	GO:0009507: chloroplast	3.08E-05
5	GO:0009515: granal stacked thylakoid	3.12E-05
6	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	3.12E-05
7	GO:0009941: chloroplast envelope	3.13E-05
8	GO:0009535: chloroplast thylakoid membrane	3.63E-05
9	GO:0009543: chloroplast thylakoid lumen	9.14E-05
10	GO:0048046: apoplast	1.20E-04
11	GO:0010007: magnesium chelatase complex	1.37E-04
12	GO:0009509: chromoplast	1.37E-04
13	GO:0009579: thylakoid	1.97E-04
14	GO:0032432: actin filament bundle	2.04E-04
15	GO:0009505: plant-type cell wall	6.46E-04
16	GO:0005884: actin filament	1.20E-03
17	GO:0005576: extracellular region	2.30E-03
18	GO:0015629: actin cytoskeleton	2.46E-03
19	GO:0005840: ribosome	3.01E-03
20	GO:0005618: cell wall	3.65E-03
21	GO:0009536: plastid	3.67E-03
22	GO:0015934: large ribosomal subunit	5.99E-03
23	GO:0005819: spindle	6.77E-03
24	GO:0005856: cytoskeleton	8.24E-03
25	GO:0009706: chloroplast inner membrane	1.20E-02
26	GO:0031225: anchored component of membrane	1.30E-02
27	GO:0046658: anchored component of plasma membrane	2.16E-02
28	GO:0005874: microtubule	2.74E-02
29	GO:0031969: chloroplast membrane	2.81E-02