Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G28050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015822: ornithine transport0.00E+00
2GO:0045489: pectin biosynthetic process8.57E-07
3GO:0030036: actin cytoskeleton organization1.86E-05
4GO:0000066: mitochondrial ornithine transport1.97E-05
5GO:0051171: regulation of nitrogen compound metabolic process1.97E-05
6GO:0007584: response to nutrient5.10E-05
7GO:0051016: barbed-end actin filament capping1.36E-04
8GO:0009743: response to carbohydrate1.36E-04
9GO:0010255: glucose mediated signaling pathway1.36E-04
10GO:0071555: cell wall organization1.78E-04
11GO:0009765: photosynthesis, light harvesting1.86E-04
12GO:0009637: response to blue light2.37E-04
13GO:0046855: inositol phosphate dephosphorylation2.97E-04
14GO:0017148: negative regulation of translation3.57E-04
15GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.57E-04
16GO:0045010: actin nucleation4.84E-04
17GO:0052543: callose deposition in cell wall4.84E-04
18GO:0007155: cell adhesion4.84E-04
19GO:0008610: lipid biosynthetic process4.84E-04
20GO:0010380: regulation of chlorophyll biosynthetic process6.90E-04
21GO:0031627: telomeric loop formation7.62E-04
22GO:0051555: flavonol biosynthetic process7.62E-04
23GO:0046856: phosphatidylinositol dephosphorylation8.37E-04
24GO:0010187: negative regulation of seed germination1.32E-03
25GO:0009768: photosynthesis, light harvesting in photosystem I1.41E-03
26GO:0040007: growth1.68E-03
27GO:0000271: polysaccharide biosynthetic process1.98E-03
28GO:0010087: phloem or xylem histogenesis1.98E-03
29GO:0010182: sugar mediated signaling pathway2.08E-03
30GO:0005975: carbohydrate metabolic process2.31E-03
31GO:0009630: gravitropism2.50E-03
32GO:0010583: response to cyclopentenone2.50E-03
33GO:0010252: auxin homeostasis2.73E-03
34GO:0018298: protein-chromophore linkage3.68E-03
35GO:0010218: response to far red light3.93E-03
36GO:0009910: negative regulation of flower development4.06E-03
37GO:0016051: carbohydrate biosynthetic process4.32E-03
38GO:0006839: mitochondrial transport4.72E-03
39GO:0010114: response to red light5.13E-03
40GO:0042546: cell wall biogenesis5.28E-03
41GO:0009846: pollen germination6.00E-03
42GO:0009740: gibberellic acid mediated signaling pathway7.72E-03
43GO:0051726: regulation of cell cycle8.39E-03
44GO:0007623: circadian rhythm1.18E-02
45GO:0010468: regulation of gene expression1.34E-02
46GO:0007049: cell cycle1.74E-02
47GO:0080167: response to karrikin1.87E-02
48GO:0009737: response to abscisic acid2.03E-02
49GO:0015979: photosynthesis2.06E-02
50GO:0048364: root development2.55E-02
51GO:0008152: metabolic process2.65E-02
52GO:0009416: response to light stimulus3.72E-02
53GO:0009611: response to wounding3.78E-02
54GO:0051301: cell division3.96E-02
55GO:0006457: protein folding4.48E-02
RankGO TermAdjusted P value
1GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
2GO:0010313: phytochrome binding1.97E-05
3GO:0008301: DNA binding, bending1.97E-05
4GO:0004566: beta-glucuronidase activity5.10E-05
5GO:0000064: L-ornithine transmembrane transporter activity5.10E-05
6GO:0048531: beta-1,3-galactosyltransferase activity5.10E-05
7GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity5.10E-05
8GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity9.05E-05
9GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity1.36E-04
10GO:0001872: (1->3)-beta-D-glucan binding1.36E-04
11GO:0048027: mRNA 5'-UTR binding1.36E-04
12GO:0004445: inositol-polyphosphate 5-phosphatase activity1.36E-04
13GO:0042162: telomeric DNA binding4.19E-04
14GO:0004650: polygalacturonase activity5.32E-04
15GO:0016829: lyase activity7.76E-04
16GO:0003691: double-stranded telomeric DNA binding8.37E-04
17GO:0031409: pigment binding1.23E-03
18GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.59E-03
19GO:0001085: RNA polymerase II transcription factor binding2.08E-03
20GO:0019901: protein kinase binding2.29E-03
21GO:0004518: nuclease activity2.50E-03
22GO:0051015: actin filament binding2.61E-03
23GO:0005200: structural constituent of cytoskeleton2.84E-03
24GO:0016168: chlorophyll binding3.19E-03
25GO:0016798: hydrolase activity, acting on glycosyl bonds3.43E-03
26GO:0030247: polysaccharide binding3.43E-03
27GO:0004693: cyclin-dependent protein serine/threonine kinase activity3.93E-03
28GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.06E-03
29GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds6.20E-03
30GO:0016757: transferase activity, transferring glycosyl groups6.41E-03
31GO:0080043: quercetin 3-O-glucosyltransferase activity7.56E-03
32GO:0080044: quercetin 7-O-glucosyltransferase activity7.56E-03
33GO:0003779: actin binding7.89E-03
34GO:0016758: transferase activity, transferring hexosyl groups9.24E-03
35GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.03E-02
36GO:0015144: carbohydrate transmembrane transporter activity1.07E-02
37GO:0005351: sugar:proton symporter activity1.16E-02
38GO:0008194: UDP-glycosyltransferase activity1.28E-02
39GO:0003682: chromatin binding1.67E-02
40GO:0016787: hydrolase activity2.05E-02
RankGO TermAdjusted P value
1GO:0000783: nuclear telomere cap complex5.50E-04
2GO:0005765: lysosomal membrane8.37E-04
3GO:0030076: light-harvesting complex1.15E-03
4GO:0009941: chloroplast envelope1.94E-03
5GO:0000139: Golgi membrane2.00E-03
6GO:0009522: photosystem I2.18E-03
7GO:0009523: photosystem II2.29E-03
8GO:0005667: transcription factor complex3.31E-03
9GO:0005856: cytoskeleton5.56E-03
10GO:0010287: plastoglobule9.07E-03
11GO:0009536: plastid1.17E-02
12GO:0009505: plant-type cell wall1.19E-02
13GO:0046658: anchored component of plasma membrane1.44E-02
14GO:0005794: Golgi apparatus1.48E-02
15GO:0009535: chloroplast thylakoid membrane2.14E-02
16GO:0005743: mitochondrial inner membrane2.35E-02
17GO:0016020: membrane2.56E-02
18GO:0043231: intracellular membrane-bounded organelle2.65E-02
19GO:0009579: thylakoid4.23E-02
20GO:0009534: chloroplast thylakoid4.26E-02
Gene type



Gene DE type