co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G27930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0012502: induction of programmed cell death	0.00E+00
2	GO:0010478: chlororespiration	0.00E+00
3	GO:0042906: xanthine transport	0.00E+00
4	GO:0044249: cellular biosynthetic process	0.00E+00
5	GO:0010730: negative regulation of hydrogen peroxide biosynthetic process	0.00E+00
6	GO:0005997: xylulose metabolic process	0.00E+00
7	GO:0046473: phosphatidic acid metabolic process	0.00E+00
8	GO:0009415: response to water	4.83E-07
9	GO:0009737: response to abscisic acid	5.64E-06
10	GO:0009409: response to cold	9.22E-06
11	GO:0098869: cellular oxidant detoxification	4.14E-05
12	GO:0009609: response to symbiotic bacterium	9.69E-05
13	GO:0007623: circadian rhythm	1.17E-04
14	GO:0009631: cold acclimation	1.32E-04
15	GO:0042542: response to hydrogen peroxide	2.03E-04
16	GO:0030003: cellular cation homeostasis	2.28E-04
17	GO:0015857: uracil transport	2.28E-04
18	GO:0030259: lipid glycosylation	2.28E-04
19	GO:0050688: regulation of defense response to virus	2.28E-04
20	GO:0010353: response to trehalose	2.28E-04
21	GO:0015914: phospholipid transport	2.28E-04
22	GO:0015720: allantoin transport	2.28E-04
23	GO:0009269: response to desiccation	3.74E-04
24	GO:0071705: nitrogen compound transport	3.80E-04
25	GO:0042344: indole glucosinolate catabolic process	3.80E-04
26	GO:0030029: actin filament-based process	3.80E-04
27	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.25E-04
28	GO:0032456: endocytic recycling	5.46E-04
29	GO:0010601: positive regulation of auxin biosynthetic process	5.46E-04
30	GO:1901332: negative regulation of lateral root development	5.46E-04
31	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	7.26E-04
32	GO:0006370: 7-methylguanosine mRNA capping	7.26E-04
33	GO:0010508: positive regulation of autophagy	7.26E-04
34	GO:0006646: phosphatidylethanolamine biosynthetic process	7.26E-04
35	GO:0015743: malate transport	7.26E-04
36	GO:0009616: virus induced gene silencing	9.17E-04
37	GO:0006656: phosphatidylcholine biosynthetic process	9.17E-04
38	GO:0043097: pyrimidine nucleoside salvage	9.17E-04
39	GO:0097428: protein maturation by iron-sulfur cluster transfer	9.17E-04
40	GO:0009414: response to water deprivation	9.49E-04
41	GO:0010286: heat acclimation	9.50E-04
42	GO:0006206: pyrimidine nucleobase metabolic process	1.12E-03
43	GO:0019509: L-methionine salvage from methylthioadenosine	1.34E-03
44	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.34E-03
45	GO:0010555: response to mannitol	1.34E-03
46	GO:0009817: defense response to fungus, incompatible interaction	1.37E-03
47	GO:0009738: abscisic acid-activated signaling pathway	1.43E-03
48	GO:0006811: ion transport	1.50E-03
49	GO:0046470: phosphatidylcholine metabolic process	1.57E-03
50	GO:0010050: vegetative phase change	1.57E-03
51	GO:0048437: floral organ development	1.57E-03
52	GO:1902074: response to salt	1.57E-03
53	GO:0009610: response to symbiotic fungus	1.57E-03
54	GO:0006491: N-glycan processing	1.81E-03
55	GO:0001510: RNA methylation	2.07E-03
56	GO:0090333: regulation of stomatal closure	2.33E-03
57	GO:0046916: cellular transition metal ion homeostasis	2.33E-03
58	GO:0009644: response to high light intensity	2.39E-03
59	GO:0030042: actin filament depolymerization	2.61E-03
60	GO:0010267: production of ta-siRNAs involved in RNA interference	2.61E-03
61	GO:2000280: regulation of root development	2.61E-03
62	GO:0008202: steroid metabolic process	2.61E-03
63	GO:0005982: starch metabolic process	2.61E-03
64	GO:0042538: hyperosmotic salinity response	2.76E-03
65	GO:0031627: telomeric loop formation	2.90E-03
66	GO:0009970: cellular response to sulfate starvation	2.90E-03
67	GO:0006995: cellular response to nitrogen starvation	2.90E-03
68	GO:0006816: calcium ion transport	3.20E-03
69	GO:0009682: induced systemic resistance	3.20E-03
70	GO:0052544: defense response by callose deposition in cell wall	3.20E-03
71	GO:0012501: programmed cell death	3.50E-03
72	GO:0005983: starch catabolic process	3.50E-03
73	GO:0007165: signal transduction	3.57E-03
74	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.82E-03
75	GO:0007034: vacuolar transport	4.15E-03
76	GO:0071732: cellular response to nitric oxide	4.49E-03
77	GO:0010025: wax biosynthetic process	4.83E-03
78	GO:0016575: histone deacetylation	5.55E-03
79	GO:0006874: cellular calcium ion homeostasis	5.55E-03
80	GO:0009695: jasmonic acid biosynthetic process	5.55E-03
81	GO:0009845: seed germination	5.68E-03
82	GO:0051260: protein homooligomerization	5.93E-03
83	GO:0071369: cellular response to ethylene stimulus	6.70E-03
84	GO:0010214: seed coat development	7.10E-03
85	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-03
86	GO:0010051: xylem and phloem pattern formation	7.93E-03
87	GO:0035556: intracellular signal transduction	8.16E-03
88	GO:0010468: regulation of gene expression	8.64E-03
89	GO:0009617: response to bacterium	8.64E-03
90	GO:0006814: sodium ion transport	8.79E-03
91	GO:0045893: positive regulation of transcription, DNA-templated	9.07E-03
92	GO:0008654: phospholipid biosynthetic process	9.23E-03
93	GO:0009556: microsporogenesis	9.23E-03
94	GO:0000302: response to reactive oxygen species	9.68E-03
95	GO:0006635: fatty acid beta-oxidation	9.68E-03
96	GO:0071281: cellular response to iron ion	1.06E-02
97	GO:0016125: sterol metabolic process	1.11E-02
98	GO:0019760: glucosinolate metabolic process	1.11E-02
99	GO:0006914: autophagy	1.11E-02
100	GO:0006511: ubiquitin-dependent protein catabolic process	1.12E-02
101	GO:0051607: defense response to virus	1.20E-02
102	GO:0006970: response to osmotic stress	1.21E-02
103	GO:0016126: sterol biosynthetic process	1.25E-02
104	GO:0009911: positive regulation of flower development	1.25E-02
105	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.30E-02
106	GO:0010029: regulation of seed germination	1.30E-02
107	GO:0006950: response to stress	1.41E-02
108	GO:0018298: protein-chromophore linkage	1.51E-02
109	GO:0009813: flavonoid biosynthetic process	1.57E-02
110	GO:0016310: phosphorylation	1.70E-02
111	GO:0016051: carbohydrate biosynthetic process	1.79E-02
112	GO:0009637: response to blue light	1.79E-02
113	GO:0006979: response to oxidative stress	1.88E-02
114	GO:0030001: metal ion transport	1.96E-02
115	GO:0016042: lipid catabolic process	2.00E-02
116	GO:0006897: endocytosis	2.02E-02
117	GO:0009408: response to heat	2.06E-02
118	GO:0009926: auxin polar transport	2.14E-02
119	GO:0000209: protein polyubiquitination	2.20E-02
120	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.46E-02
121	GO:0000165: MAPK cascade	2.46E-02
122	GO:0006813: potassium ion transport	2.65E-02
123	GO:0009651: response to salt stress	2.70E-02
124	GO:0051603: proteolysis involved in cellular protein catabolic process	2.72E-02
125	GO:0005975: carbohydrate metabolic process	3.14E-02
126	GO:0009908: flower development	3.30E-02
127	GO:0009553: embryo sac development	3.33E-02
128	GO:0051726: regulation of cell cycle	3.55E-02
129	GO:0009416: response to light stimulus	3.65E-02
130	GO:0009611: response to wounding	3.73E-02
131	GO:0009058: biosynthetic process	4.15E-02
132	GO:0042744: hydrogen peroxide catabolic process	4.38E-02
133	GO:0006633: fatty acid biosynthetic process	4.70E-02
134	GO:0006457: protein folding	4.71E-02
135	GO:0006413: translational initiation	4.78E-02
136	GO:0016036: cellular response to phosphate starvation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
2	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
3	GO:0004482: mRNA (guanine-N7-)-methyltransferase activity	0.00E+00
4	GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity	0.00E+00
5	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
6	GO:0005272: sodium channel activity	0.00E+00
7	GO:0102203: brassicasterol glucosyltransferase activity	9.69E-05
8	GO:0102202: soladodine glucosyltransferase activity	9.69E-05
9	GO:0050521: alpha-glucan, water dikinase activity	9.69E-05
10	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	9.69E-05
11	GO:0046870: cadmium ion binding	9.69E-05
12	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	9.69E-05
13	GO:0004856: xylulokinase activity	9.69E-05
14	GO:0016906: sterol 3-beta-glucosyltransferase activity	9.69E-05
15	GO:0035671: enone reductase activity	9.69E-05
16	GO:0005509: calcium ion binding	1.69E-04
17	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.28E-04
18	GO:0004839: ubiquitin activating enzyme activity	2.28E-04
19	GO:0001047: core promoter binding	2.28E-04
20	GO:0032791: lead ion binding	2.28E-04
21	GO:0005274: allantoin uptake transmembrane transporter activity	2.28E-04
22	GO:0004609: phosphatidylserine decarboxylase activity	2.28E-04
23	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.28E-04
24	GO:0004096: catalase activity	3.80E-04
25	GO:0004165: dodecenoyl-CoA delta-isomerase activity	5.46E-04
26	GO:0004300: enoyl-CoA hydratase activity	5.46E-04
27	GO:0015210: uracil transmembrane transporter activity	7.26E-04
28	GO:0008526: phosphatidylinositol transporter activity	7.26E-04
29	GO:0005253: anion channel activity	7.26E-04
30	GO:0008641: small protein activating enzyme activity	9.17E-04
31	GO:0016773: phosphotransferase activity, alcohol group as acceptor	9.17E-04
32	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	9.17E-04
33	GO:0004629: phospholipase C activity	1.12E-03
34	GO:0000293: ferric-chelate reductase activity	1.12E-03
35	GO:0019137: thioglucosidase activity	1.12E-03
36	GO:2001070: starch binding	1.12E-03
37	GO:0005261: cation channel activity	1.34E-03
38	GO:0004849: uridine kinase activity	1.34E-03
39	GO:0004602: glutathione peroxidase activity	1.34E-03
40	GO:0004435: phosphatidylinositol phospholipase C activity	1.34E-03
41	GO:0009881: photoreceptor activity	1.57E-03
42	GO:0015140: malate transmembrane transporter activity	1.57E-03
43	GO:0004630: phospholipase D activity	2.07E-03
44	GO:0005267: potassium channel activity	2.07E-03
45	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.07E-03
46	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.07E-03
47	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.33E-03
48	GO:0009672: auxin:proton symporter activity	2.61E-03
49	GO:0003691: double-stranded telomeric DNA binding	3.20E-03
50	GO:0005262: calcium channel activity	3.82E-03
51	GO:0031624: ubiquitin conjugating enzyme binding	4.15E-03
52	GO:0005217: intracellular ligand-gated ion channel activity	4.49E-03
53	GO:0004970: ionotropic glutamate receptor activity	4.49E-03
54	GO:0004407: histone deacetylase activity	5.19E-03
55	GO:0051536: iron-sulfur cluster binding	5.19E-03
56	GO:0005515: protein binding	5.47E-03
57	GO:0051087: chaperone binding	5.55E-03
58	GO:0004707: MAP kinase activity	5.93E-03
59	GO:0004842: ubiquitin-protein transferase activity	7.15E-03
60	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	8.35E-03
61	GO:0016853: isomerase activity	8.79E-03
62	GO:0005200: structural constituent of cytoskeleton	1.16E-02
63	GO:0102483: scopolin beta-glucosidase activity	1.41E-02
64	GO:0005096: GTPase activator activity	1.57E-02
65	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.62E-02
66	GO:0050897: cobalt ion binding	1.68E-02
67	GO:0008422: beta-glucosidase activity	1.91E-02
68	GO:0003824: catalytic activity	2.10E-02
69	GO:0016301: kinase activity	2.12E-02
70	GO:0005198: structural molecule activity	2.33E-02
71	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.39E-02
72	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.19E-02
73	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.19E-02
74	GO:0003779: actin binding	3.33E-02
75	GO:0016758: transferase activity, transferring hexosyl groups	3.92E-02
76	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0043036: starch grain	2.28E-04
2	GO:0015630: microtubule cytoskeleton	5.46E-04
3	GO:0005851: eukaryotic translation initiation factor 2B complex	1.12E-03
4	GO:0005655: nucleolar ribonuclease P complex	1.34E-03
5	GO:0000815: ESCRT III complex	1.34E-03
6	GO:0005777: peroxisome	1.85E-03
7	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.07E-03
8	GO:0000783: nuclear telomere cap complex	2.07E-03
9	GO:0048471: perinuclear region of cytoplasm	3.20E-03
10	GO:0015629: actin cytoskeleton	6.70E-03
11	GO:0005737: cytoplasm	9.09E-03
12	GO:0031965: nuclear membrane	9.23E-03
13	GO:0000151: ubiquitin ligase complex	1.51E-02
14	GO:0031966: mitochondrial membrane	2.52E-02
15	GO:0010008: endosome membrane	3.05E-02
16	GO:0005834: heterotrimeric G-protein complex	3.12E-02
17	GO:0005829: cytosol	3.21E-02
18	GO:0009506: plasmodesma	3.33E-02
19	GO:0022626: cytosolic ribosome	3.50E-02