co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G27210

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000390: spliceosomal complex disassembly	0.00E+00
2	GO:0048867: stem cell fate determination	0.00E+00
3	GO:0051928: positive regulation of calcium ion transport	0.00E+00
4	GO:0043171: peptide catabolic process	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0032012: regulation of ARF protein signal transduction	1.22E-06
7	GO:0015812: gamma-aminobutyric acid transport	7.58E-05
8	GO:1990641: response to iron ion starvation	7.58E-05
9	GO:1902265: abscisic acid homeostasis	7.58E-05
10	GO:0042542: response to hydrogen peroxide	1.28E-04
11	GO:0006101: citrate metabolic process	1.81E-04
12	GO:0048209: regulation of vesicle targeting, to, from or within Golgi	1.81E-04
13	GO:0001736: establishment of planar polarity	1.81E-04
14	GO:0006611: protein export from nucleus	1.81E-04
15	GO:0032509: endosome transport via multivesicular body sorting pathway	1.81E-04
16	GO:0000055: ribosomal large subunit export from nucleus	3.05E-04
17	GO:0042256: mature ribosome assembly	3.05E-04
18	GO:0006882: cellular zinc ion homeostasis	4.41E-04
19	GO:0010601: positive regulation of auxin biosynthetic process	4.41E-04
20	GO:0042752: regulation of circadian rhythm	4.76E-04
21	GO:0006635: fatty acid beta-oxidation	5.45E-04
22	GO:0006878: cellular copper ion homeostasis	5.87E-04
23	GO:0006646: phosphatidylethanolamine biosynthetic process	5.87E-04
24	GO:0009687: abscisic acid metabolic process	5.87E-04
25	GO:0015743: malate transport	5.87E-04
26	GO:0007623: circadian rhythm	6.63E-04
27	GO:0007029: endoplasmic reticulum organization	7.44E-04
28	GO:0048578: positive regulation of long-day photoperiodism, flowering	7.44E-04
29	GO:0009911: positive regulation of flower development	7.77E-04
30	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	9.07E-04
31	GO:0000741: karyogamy	9.07E-04
32	GO:0035556: intracellular signal transduction	9.90E-04
33	GO:0009942: longitudinal axis specification	1.08E-03
34	GO:0000911: cytokinesis by cell plate formation	1.08E-03
35	GO:0009637: response to blue light	1.25E-03
36	GO:0048437: floral organ development	1.26E-03
37	GO:0006099: tricarboxylic acid cycle	1.31E-03
38	GO:0006102: isocitrate metabolic process	1.46E-03
39	GO:0007155: cell adhesion	1.46E-03
40	GO:0009061: anaerobic respiration	1.46E-03
41	GO:0009819: drought recovery	1.46E-03
42	GO:0006875: cellular metal ion homeostasis	1.46E-03
43	GO:0080167: response to karrikin	1.48E-03
44	GO:0009880: embryonic pattern specification	1.66E-03
45	GO:0001510: RNA methylation	1.66E-03
46	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	1.87E-03
47	GO:0046916: cellular transition metal ion homeostasis	1.87E-03
48	GO:0007165: signal transduction	1.98E-03
49	GO:0009970: cellular response to sulfate starvation	2.32E-03
50	GO:0006995: cellular response to nitrogen starvation	2.32E-03
51	GO:0048765: root hair cell differentiation	2.56E-03
52	GO:0010152: pollen maturation	2.80E-03
53	GO:2000012: regulation of auxin polar transport	3.06E-03
54	GO:0006396: RNA processing	3.12E-03
55	GO:0010540: basipetal auxin transport	3.32E-03
56	GO:0019853: L-ascorbic acid biosynthetic process	3.59E-03
57	GO:0010030: positive regulation of seed germination	3.59E-03
58	GO:0009908: flower development	4.40E-03
59	GO:0009695: jasmonic acid biosynthetic process	4.43E-03
60	GO:0010073: meristem maintenance	4.43E-03
61	GO:0016575: histone deacetylation	4.43E-03
62	GO:0006874: cellular calcium ion homeostasis	4.43E-03
63	GO:0003333: amino acid transmembrane transport	4.73E-03
64	GO:0016036: cellular response to phosphate starvation	4.86E-03
65	GO:0006012: galactose metabolic process	5.34E-03
66	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	5.98E-03
67	GO:0010468: regulation of gene expression	6.22E-03
68	GO:0010087: phloem or xylem histogenesis	6.31E-03
69	GO:0010197: polar nucleus fusion	6.64E-03
70	GO:0008654: phospholipid biosynthetic process	7.34E-03
71	GO:0009556: microsporogenesis	7.34E-03
72	GO:0010286: heat acclimation	9.17E-03
73	GO:0001666: response to hypoxia	9.95E-03
74	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.03E-02
75	GO:0010029: regulation of seed germination	1.03E-02
76	GO:0016192: vesicle-mediated transport	1.05E-02
77	GO:0048573: photoperiodism, flowering	1.12E-02
78	GO:0006950: response to stress	1.12E-02
79	GO:0048481: plant ovule development	1.20E-02
80	GO:0018298: protein-chromophore linkage	1.20E-02
81	GO:0010311: lateral root formation	1.24E-02
82	GO:0010218: response to far red light	1.28E-02
83	GO:0009834: plant-type secondary cell wall biogenesis	1.28E-02
84	GO:0006811: ion transport	1.28E-02
85	GO:0010043: response to zinc ion	1.33E-02
86	GO:0030001: metal ion transport	1.55E-02
87	GO:0006897: endocytosis	1.60E-02
88	GO:0009926: auxin polar transport	1.70E-02
89	GO:0008643: carbohydrate transport	1.79E-02
90	GO:0009409: response to cold	1.80E-02
91	GO:0000165: MAPK cascade	1.94E-02
92	GO:0006812: cation transport	1.99E-02
93	GO:0009846: pollen germination	1.99E-02
94	GO:0009585: red, far-red light phototransduction	2.10E-02
95	GO:0006857: oligopeptide transport	2.20E-02
96	GO:0009909: regulation of flower development	2.25E-02
97	GO:0009738: abscisic acid-activated signaling pathway	2.55E-02
98	GO:0009553: embryo sac development	2.64E-02
99	GO:0000398: mRNA splicing, via spliceosome	2.98E-02
100	GO:0009845: seed germination	3.34E-02
101	GO:0042744: hydrogen peroxide catabolic process	3.47E-02
102	GO:0006633: fatty acid biosynthetic process	3.72E-02
103	GO:0010228: vegetative to reproductive phase transition of meristem	4.11E-02
104	GO:0009739: response to gibberellin	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
2	GO:1990446: U1 snRNP binding	0.00E+00
3	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
4	GO:0010292: GTP:GDP antiporter activity	0.00E+00
5	GO:0005086: ARF guanyl-nucleotide exchange factor activity	5.57E-06
6	GO:0004525: ribonuclease III activity	3.68E-05
7	GO:0070006: metalloaminopeptidase activity	7.58E-05
8	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	7.58E-05
9	GO:0010013: N-1-naphthylphthalamic acid binding	7.58E-05
10	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	7.58E-05
11	GO:0046870: cadmium ion binding	7.58E-05
12	GO:0015180: L-alanine transmembrane transporter activity	1.81E-04
13	GO:0001047: core promoter binding	1.81E-04
14	GO:0032791: lead ion binding	1.81E-04
15	GO:0004609: phosphatidylserine decarboxylase activity	1.81E-04
16	GO:0003994: aconitate hydratase activity	1.81E-04
17	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	1.81E-04
18	GO:0004096: catalase activity	3.05E-04
19	GO:0019829: cation-transporting ATPase activity	3.05E-04
20	GO:0004108: citrate (Si)-synthase activity	4.41E-04
21	GO:0043023: ribosomal large subunit binding	4.41E-04
22	GO:0004165: dodecenoyl-CoA delta-isomerase activity	4.41E-04
23	GO:0004300: enoyl-CoA hydratase activity	4.41E-04
24	GO:0015189: L-lysine transmembrane transporter activity	4.41E-04
25	GO:0048027: mRNA 5'-UTR binding	4.41E-04
26	GO:0015181: arginine transmembrane transporter activity	4.41E-04
27	GO:0005253: anion channel activity	5.87E-04
28	GO:0042277: peptide binding	5.87E-04
29	GO:0004737: pyruvate decarboxylase activity	5.87E-04
30	GO:0005313: L-glutamate transmembrane transporter activity	5.87E-04
31	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	7.44E-04
32	GO:0010294: abscisic acid glucosyltransferase activity	7.44E-04
33	GO:0030976: thiamine pyrophosphate binding	9.07E-04
34	GO:0004629: phospholipase C activity	9.07E-04
35	GO:0015562: efflux transmembrane transporter activity	9.07E-04
36	GO:0004435: phosphatidylinositol phospholipase C activity	1.08E-03
37	GO:0050897: cobalt ion binding	1.15E-03
38	GO:0005085: guanyl-nucleotide exchange factor activity	1.26E-03
39	GO:0016831: carboxy-lyase activity	1.26E-03
40	GO:0009881: photoreceptor activity	1.26E-03
41	GO:0015140: malate transmembrane transporter activity	1.26E-03
42	GO:0004033: aldo-keto reductase (NADP) activity	1.46E-03
43	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	1.66E-03
44	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.87E-03
45	GO:0004177: aminopeptidase activity	2.56E-03
46	GO:0005388: calcium-transporting ATPase activity	3.06E-03
47	GO:0004407: histone deacetylase activity	4.15E-03
48	GO:0008324: cation transmembrane transporter activity	4.43E-03
49	GO:0019706: protein-cysteine S-palmitoyltransferase activity	4.73E-03
50	GO:0004707: MAP kinase activity	4.73E-03
51	GO:0015297: antiporter activity	4.98E-03
52	GO:0042802: identical protein binding	6.62E-03
53	GO:0005509: calcium ion binding	1.11E-02
54	GO:0004722: protein serine/threonine phosphatase activity	1.32E-02
55	GO:0003746: translation elongation factor activity	1.42E-02
56	GO:0051539: 4 iron, 4 sulfur cluster binding	1.55E-02
57	GO:0015171: amino acid transmembrane transporter activity	2.25E-02
58	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.53E-02
59	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.53E-02
60	GO:0016874: ligase activity	2.58E-02
61	GO:0022857: transmembrane transporter activity	2.58E-02
62	GO:0016301: kinase activity	2.78E-02
63	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.22E-02
64	GO:0005515: protein binding	3.35E-02
65	GO:0005507: copper ion binding	3.74E-02
66	GO:0008194: UDP-glycosyltransferase activity	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0071008: U2-type post-mRNA release spliceosomal complex	0.00E+00
2	GO:0031981: nuclear lumen	0.00E+00
3	GO:0005777: peroxisome	1.91E-04
4	GO:0005783: endoplasmic reticulum	4.58E-04
5	GO:0031090: organelle membrane	1.87E-03
6	GO:0005829: cytosol	2.40E-03
7	GO:0010008: endosome membrane	2.61E-03
8	GO:0009705: plant-type vacuole membrane	5.21E-03
9	GO:0031965: nuclear membrane	7.34E-03
10	GO:0005886: plasma membrane	1.01E-02
11	GO:0016021: integral component of membrane	1.26E-02
12	GO:0000786: nucleosome	1.37E-02
13	GO:0005737: cytoplasm	1.38E-02
14	GO:0009506: plasmodesma	1.77E-02
15	GO:0031966: mitochondrial membrane	1.99E-02
16	GO:0005887: integral component of plasma membrane	2.01E-02
17	GO:0005789: endoplasmic reticulum membrane	2.09E-02
18	GO:0005618: cell wall	2.11E-02
19	GO:0005654: nucleoplasm	3.10E-02
20	GO:0009543: chloroplast thylakoid lumen	3.16E-02
21	GO:0005802: trans-Golgi network	4.20E-02
22	GO:0005768: endosome	4.77E-02