co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G26240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010378: temperature compensation of the circadian clock	0.00E+00
2	GO:0042906: xanthine transport	0.00E+00
3	GO:0005997: xylulose metabolic process	0.00E+00
4	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
5	GO:0043171: peptide catabolic process	0.00E+00
6	GO:0009768: photosynthesis, light harvesting in photosystem I	3.25E-07
7	GO:0009645: response to low light intensity stimulus	5.88E-07
8	GO:0010218: response to far red light	1.04E-05
9	GO:0009409: response to cold	3.12E-05
10	GO:0015812: gamma-aminobutyric acid transport	1.25E-04
11	GO:0032958: inositol phosphate biosynthetic process	1.25E-04
12	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.25E-04
13	GO:0018298: protein-chromophore linkage	1.76E-04
14	GO:0007623: circadian rhythm	2.14E-04
15	GO:0015857: uracil transport	2.90E-04
16	GO:0015720: allantoin transport	2.90E-04
17	GO:0051170: nuclear import	2.90E-04
18	GO:0042542: response to hydrogen peroxide	3.25E-04
19	GO:0010114: response to red light	3.42E-04
20	GO:0009644: response to high light intensity	3.80E-04
21	GO:0006598: polyamine catabolic process	4.78E-04
22	GO:0071705: nitrogen compound transport	4.78E-04
23	GO:0090153: regulation of sphingolipid biosynthetic process	4.78E-04
24	GO:0048511: rhythmic process	5.28E-04
25	GO:0009737: response to abscisic acid	5.35E-04
26	GO:0010017: red or far-red light signaling pathway	5.76E-04
27	GO:0035556: intracellular signal transduction	5.90E-04
28	GO:0031936: negative regulation of chromatin silencing	6.85E-04
29	GO:1901332: negative regulation of lateral root development	6.85E-04
30	GO:0006020: inositol metabolic process	6.85E-04
31	GO:0010601: positive regulation of auxin biosynthetic process	6.85E-04
32	GO:0015979: photosynthesis	7.35E-04
33	GO:0030104: water homeostasis	9.08E-04
34	GO:0006646: phosphatidylethanolamine biosynthetic process	9.08E-04
35	GO:0015743: malate transport	9.08E-04
36	GO:0009765: photosynthesis, light harvesting	9.08E-04
37	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	9.08E-04
38	GO:0010600: regulation of auxin biosynthetic process	9.08E-04
39	GO:0016926: protein desumoylation	1.15E-03
40	GO:0043097: pyrimidine nucleoside salvage	1.15E-03
41	GO:0048578: positive regulation of long-day photoperiodism, flowering	1.15E-03
42	GO:0006206: pyrimidine nucleobase metabolic process	1.41E-03
43	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.68E-03
44	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.68E-03
45	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.68E-03
46	GO:0009817: defense response to fungus, incompatible interaction	1.93E-03
47	GO:0009769: photosynthesis, light harvesting in photosystem II	1.98E-03
48	GO:0010161: red light signaling pathway	1.98E-03
49	GO:0048437: floral organ development	1.98E-03
50	GO:0080111: DNA demethylation	1.98E-03
51	GO:0000160: phosphorelay signal transduction system	2.02E-03
52	GO:0009631: cold acclimation	2.22E-03
53	GO:0006506: GPI anchor biosynthetic process	2.29E-03
54	GO:0009415: response to water	2.29E-03
55	GO:0009704: de-etiolation	2.29E-03
56	GO:0010928: regulation of auxin mediated signaling pathway	2.29E-03
57	GO:0009637: response to blue light	2.43E-03
58	GO:0009416: response to light stimulus	2.57E-03
59	GO:0010099: regulation of photomorphogenesis	2.61E-03
60	GO:0009827: plant-type cell wall modification	2.61E-03
61	GO:0090333: regulation of stomatal closure	2.95E-03
62	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.31E-03
63	GO:0008643: carbohydrate transport	3.37E-03
64	GO:0080167: response to karrikin	3.51E-03
65	GO:0055062: phosphate ion homeostasis	3.68E-03
66	GO:0009641: shade avoidance	3.68E-03
67	GO:0010162: seed dormancy process	3.68E-03
68	GO:0009585: red, far-red light phototransduction	4.20E-03
69	GO:0016925: protein sumoylation	4.45E-03
70	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.86E-03
71	GO:0009718: anthocyanin-containing compound biosynthetic process	4.86E-03
72	GO:0009266: response to temperature stimulus	5.28E-03
73	GO:0016575: histone deacetylation	7.08E-03
74	GO:0009414: response to water deprivation	7.23E-03
75	GO:0003333: amino acid transmembrane transport	7.56E-03
76	GO:0009269: response to desiccation	7.56E-03
77	GO:0006355: regulation of transcription, DNA-templated	7.60E-03
78	GO:0071215: cellular response to abscisic acid stimulus	8.56E-03
79	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.60E-03
80	GO:0080022: primary root development	1.01E-02
81	GO:0006814: sodium ion transport	1.12E-02
82	GO:0042752: regulation of circadian rhythm	1.12E-02
83	GO:0009738: abscisic acid-activated signaling pathway	1.14E-02
84	GO:0008654: phospholipid biosynthetic process	1.18E-02
85	GO:0009556: microsporogenesis	1.18E-02
86	GO:0010468: regulation of gene expression	1.23E-02
87	GO:0000302: response to reactive oxygen species	1.24E-02
88	GO:1901657: glycosyl compound metabolic process	1.36E-02
89	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.48E-02
90	GO:0010286: heat acclimation	1.48E-02
91	GO:0009651: response to salt stress	1.52E-02
92	GO:0055085: transmembrane transport	1.61E-02
93	GO:0016126: sterol biosynthetic process	1.61E-02
94	GO:0010029: regulation of seed germination	1.67E-02
95	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.67E-02
96	GO:0006970: response to osmotic stress	1.72E-02
97	GO:0006950: response to stress	1.81E-02
98	GO:0015995: chlorophyll biosynthetic process	1.81E-02
99	GO:0048481: plant ovule development	1.94E-02
100	GO:0006811: ion transport	2.08E-02
101	GO:0007165: signal transduction	2.26E-02
102	GO:0016051: carbohydrate biosynthetic process	2.30E-02
103	GO:0045892: negative regulation of transcription, DNA-templated	2.42E-02
104	GO:0009640: photomorphogenesis	2.75E-02
105	GO:0009926: auxin polar transport	2.75E-02
106	GO:0051707: response to other organism	2.75E-02
107	GO:0000209: protein polyubiquitination	2.83E-02
108	GO:0009408: response to heat	2.93E-02
109	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	3.15E-02
110	GO:0000165: MAPK cascade	3.15E-02
111	GO:0006812: cation transport	3.24E-02
112	GO:0051603: proteolysis involved in cellular protein catabolic process	3.49E-02
113	GO:0006351: transcription, DNA-templated	3.56E-02
114	GO:0009909: regulation of flower development	3.66E-02
115	GO:0009553: embryo sac development	4.28E-02
116	GO:0009624: response to nematode	4.37E-02
117	GO:0051726: regulation of cell cycle	4.56E-02
118	GO:0005975: carbohydrate metabolic process	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
8	GO:0031409: pigment binding	2.00E-07
9	GO:0016168: chlorophyll binding	5.35E-06
10	GO:0004856: xylulokinase activity	1.25E-04
11	GO:0070006: metalloaminopeptidase activity	1.25E-04
12	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	1.25E-04
13	GO:0008158: hedgehog receptor activity	1.25E-04
14	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.25E-04
15	GO:0000829: inositol heptakisphosphate kinase activity	1.25E-04
16	GO:0010013: N-1-naphthylphthalamic acid binding	1.25E-04
17	GO:0080079: cellobiose glucosidase activity	1.25E-04
18	GO:0000828: inositol hexakisphosphate kinase activity	1.25E-04
19	GO:0015180: L-alanine transmembrane transporter activity	2.90E-04
20	GO:0005274: allantoin uptake transmembrane transporter activity	2.90E-04
21	GO:0004609: phosphatidylserine decarboxylase activity	2.90E-04
22	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.90E-04
23	GO:0046592: polyamine oxidase activity	4.78E-04
24	GO:0019948: SUMO activating enzyme activity	4.78E-04
25	GO:0017150: tRNA dihydrouridine synthase activity	4.78E-04
26	GO:0004707: MAP kinase activity	5.28E-04
27	GO:0015189: L-lysine transmembrane transporter activity	6.85E-04
28	GO:0000254: C-4 methylsterol oxidase activity	6.85E-04
29	GO:0015181: arginine transmembrane transporter activity	6.85E-04
30	GO:0005253: anion channel activity	9.08E-04
31	GO:0042277: peptide binding	9.08E-04
32	GO:0015210: uracil transmembrane transporter activity	9.08E-04
33	GO:0005313: L-glutamate transmembrane transporter activity	9.08E-04
34	GO:0016929: SUMO-specific protease activity	1.15E-03
35	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.15E-03
36	GO:0000156: phosphorelay response regulator activity	1.18E-03
37	GO:0000293: ferric-chelate reductase activity	1.41E-03
38	GO:0004629: phospholipase C activity	1.41E-03
39	GO:0015562: efflux transmembrane transporter activity	1.41E-03
40	GO:0004849: uridine kinase activity	1.68E-03
41	GO:0004435: phosphatidylinositol phospholipase C activity	1.68E-03
42	GO:0070300: phosphatidic acid binding	1.68E-03
43	GO:0015140: malate transmembrane transporter activity	1.98E-03
44	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.61E-03
45	GO:0000989: transcription factor activity, transcription factor binding	2.95E-03
46	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.95E-03
47	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	3.68E-03
48	GO:0004177: aminopeptidase activity	4.06E-03
49	GO:0047372: acylglycerol lipase activity	4.06E-03
50	GO:0005315: inorganic phosphate transmembrane transporter activity	4.86E-03
51	GO:0004565: beta-galactosidase activity	4.86E-03
52	GO:0008131: primary amine oxidase activity	5.28E-03
53	GO:0031624: ubiquitin conjugating enzyme binding	5.28E-03
54	GO:0004175: endopeptidase activity	5.28E-03
55	GO:0004407: histone deacetylase activity	6.61E-03
56	GO:0008324: cation transmembrane transporter activity	7.08E-03
57	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.56E-03
58	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	7.66E-03
59	GO:0008514: organic anion transmembrane transporter activity	9.07E-03
60	GO:0015297: antiporter activity	9.83E-03
61	GO:0005351: sugar:proton symporter activity	1.01E-02
62	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.07E-02
63	GO:0102483: scopolin beta-glucosidase activity	1.81E-02
64	GO:0005515: protein binding	1.94E-02
65	GO:0004497: monooxygenase activity	1.99E-02
66	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.08E-02
67	GO:0061630: ubiquitin protein ligase activity	2.09E-02
68	GO:0008270: zinc ion binding	2.13E-02
69	GO:0016787: hydrolase activity	2.35E-02
70	GO:0008422: beta-glucosidase activity	2.45E-02
71	GO:0042393: histone binding	2.52E-02
72	GO:0005506: iron ion binding	2.84E-02
73	GO:0015293: symporter activity	2.99E-02
74	GO:0043565: sequence-specific DNA binding	3.09E-02
75	GO:0008234: cysteine-type peptidase activity	3.66E-02
76	GO:0015171: amino acid transmembrane transporter activity	3.66E-02
77	GO:0022857: transmembrane transporter activity	4.19E-02
78	GO:0016301: kinase activity	4.38E-02
79	GO:0004672: protein kinase activity	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	1.53E-07
2	GO:0009522: photosystem I	5.59E-05
3	GO:0010287: plastoglobule	1.11E-04
4	GO:0009579: thylakoid	7.35E-04
5	GO:0032586: protein storage vacuole membrane	9.08E-04
6	GO:0009517: PSII associated light-harvesting complex II	9.08E-04
7	GO:0009523: photosystem II	9.76E-04
8	GO:0016021: integral component of membrane	2.00E-03
9	GO:0000326: protein storage vacuole	2.61E-03
10	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.61E-03
11	GO:0031090: organelle membrane	2.95E-03
12	GO:0010494: cytoplasmic stress granule	2.95E-03
13	GO:0009534: chloroplast thylakoid	3.42E-03
14	GO:0031966: mitochondrial membrane	3.91E-03
15	GO:0016607: nuclear speck	5.11E-03
16	GO:0009535: chloroplast thylakoid membrane	7.53E-03
17	GO:0009941: chloroplast envelope	9.22E-03
18	GO:0000932: P-body	1.61E-02
19	GO:0000151: ubiquitin ligase complex	1.94E-02
20	GO:0005634: nucleus	2.87E-02
21	GO:0016020: membrane	3.13E-02
22	GO:0005834: heterotrimeric G-protein complex	4.01E-02