Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response0.00E+00
2GO:0070212: protein poly-ADP-ribosylation0.00E+00
3GO:0042430: indole-containing compound metabolic process0.00E+00
4GO:0030149: sphingolipid catabolic process0.00E+00
5GO:0071433: cell wall repair0.00E+00
6GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
7GO:0072660: maintenance of protein location in plasma membrane0.00E+00
8GO:0009626: plant-type hypersensitive response1.30E-06
9GO:0009617: response to bacterium1.14E-05
10GO:0010193: response to ozone3.88E-05
11GO:0006102: isocitrate metabolic process5.25E-05
12GO:0006457: protein folding6.63E-05
13GO:0009615: response to virus6.89E-05
14GO:0010450: inflorescence meristem growth9.50E-05
15GO:0051245: negative regulation of cellular defense response9.50E-05
16GO:0009609: response to symbiotic bacterium9.50E-05
17GO:0055081: anion homeostasis9.50E-05
18GO:0009270: response to humidity9.50E-05
19GO:0048448: stamen morphogenesis9.50E-05
20GO:0046686: response to cadmium ion9.67E-05
21GO:0043069: negative regulation of programmed cell death1.20E-04
22GO:0006099: tricarboxylic acid cycle1.54E-04
23GO:0009266: response to temperature stimulus2.13E-04
24GO:0048833: specification of floral organ number2.24E-04
25GO:0019752: carboxylic acid metabolic process2.24E-04
26GO:0019725: cellular homeostasis2.24E-04
27GO:0006123: mitochondrial electron transport, cytochrome c to oxygen2.24E-04
28GO:0009863: salicylic acid mediated signaling pathway3.00E-04
29GO:0045039: protein import into mitochondrial inner membrane3.73E-04
30GO:0010581: regulation of starch biosynthetic process3.73E-04
31GO:0055074: calcium ion homeostasis3.73E-04
32GO:0045793: positive regulation of cell size3.73E-04
33GO:0072661: protein targeting to plasma membrane3.73E-04
34GO:0010186: positive regulation of cellular defense response3.73E-04
35GO:0043207: response to external biotic stimulus5.37E-04
36GO:0010148: transpiration5.37E-04
37GO:0006612: protein targeting to membrane5.37E-04
38GO:0015696: ammonium transport5.37E-04
39GO:0001676: long-chain fatty acid metabolic process5.37E-04
40GO:0048194: Golgi vesicle budding5.37E-04
41GO:0009408: response to heat6.11E-04
42GO:0009646: response to absence of light6.38E-04
43GO:0009652: thigmotropism7.14E-04
44GO:0072488: ammonium transmembrane transport7.14E-04
45GO:0010363: regulation of plant-type hypersensitive response7.14E-04
46GO:0051205: protein insertion into membrane7.14E-04
47GO:0034440: lipid oxidation7.14E-04
48GO:0006878: cellular copper ion homeostasis7.14E-04
49GO:0060548: negative regulation of cell death7.14E-04
50GO:0046283: anthocyanin-containing compound metabolic process9.02E-04
51GO:0031365: N-terminal protein amino acid modification9.02E-04
52GO:0006461: protein complex assembly9.02E-04
53GO:0006979: response to oxidative stress9.59E-04
54GO:0018258: protein O-linked glycosylation via hydroxyproline1.10E-03
55GO:0009228: thiamine biosynthetic process1.10E-03
56GO:0010405: arabinogalactan protein metabolic process1.10E-03
57GO:0009627: systemic acquired resistance1.15E-03
58GO:0006120: mitochondrial electron transport, NADH to ubiquinone1.31E-03
59GO:0009423: chorismate biosynthetic process1.31E-03
60GO:0009612: response to mechanical stimulus1.31E-03
61GO:0080086: stamen filament development1.31E-03
62GO:1900056: negative regulation of leaf senescence1.54E-03
63GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.54E-03
64GO:0009610: response to symbiotic fungus1.54E-03
65GO:0006605: protein targeting1.78E-03
66GO:0050821: protein stabilization1.78E-03
67GO:0031540: regulation of anthocyanin biosynthetic process1.78E-03
68GO:0006952: defense response1.87E-03
69GO:0022900: electron transport chain2.03E-03
70GO:0009880: embryonic pattern specification2.03E-03
71GO:0010204: defense response signaling pathway, resistance gene-independent2.03E-03
72GO:0051707: response to other organism2.16E-03
73GO:0046685: response to arsenic-containing substance2.29E-03
74GO:0009051: pentose-phosphate shunt, oxidative branch2.29E-03
75GO:0010112: regulation of systemic acquired resistance2.29E-03
76GO:0006511: ubiquitin-dependent protein catabolic process2.30E-03
77GO:0030042: actin filament depolymerization2.56E-03
78GO:0048354: mucilage biosynthetic process involved in seed coat development2.56E-03
79GO:0009870: defense response signaling pathway, resistance gene-dependent2.85E-03
80GO:0009073: aromatic amino acid family biosynthetic process3.14E-03
81GO:0016485: protein processing3.14E-03
82GO:0015706: nitrate transport3.44E-03
83GO:0009620: response to fungus3.74E-03
84GO:0006006: glucose metabolic process3.76E-03
85GO:0002237: response to molecule of bacterial origin4.08E-03
86GO:0009624: response to nematode4.10E-03
87GO:0042742: defense response to bacterium4.21E-03
88GO:0010167: response to nitrate4.41E-03
89GO:0009901: anther dehiscence4.41E-03
90GO:0046688: response to copper ion4.41E-03
91GO:0070588: calcium ion transmembrane transport4.41E-03
92GO:0000162: tryptophan biosynthetic process4.75E-03
93GO:0034976: response to endoplasmic reticulum stress4.75E-03
94GO:0009695: jasmonic acid biosynthetic process5.46E-03
95GO:0006825: copper ion transport5.46E-03
96GO:0006334: nucleosome assembly5.83E-03
97GO:0048278: vesicle docking5.83E-03
98GO:0031408: oxylipin biosynthetic process5.83E-03
99GO:0009814: defense response, incompatible interaction6.20E-03
100GO:0031348: negative regulation of defense response6.20E-03
101GO:0009411: response to UV6.58E-03
102GO:0040007: growth6.58E-03
103GO:0009625: response to insect6.58E-03
104GO:0070417: cellular response to cold7.38E-03
105GO:0048653: anther development7.79E-03
106GO:0042631: cellular response to water deprivation7.79E-03
107GO:0042391: regulation of membrane potential7.79E-03
108GO:0006520: cellular amino acid metabolic process8.21E-03
109GO:0015986: ATP synthesis coupled proton transport8.63E-03
110GO:0061025: membrane fusion8.63E-03
111GO:0000302: response to reactive oxygen species9.51E-03
112GO:0007264: small GTPase mediated signal transduction9.96E-03
113GO:0032502: developmental process9.96E-03
114GO:0030163: protein catabolic process1.04E-02
115GO:0010286: heat acclimation1.14E-02
116GO:0001666: response to hypoxia1.23E-02
117GO:0009723: response to ethylene1.27E-02
118GO:0042128: nitrate assimilation1.33E-02
119GO:0006906: vesicle fusion1.33E-02
120GO:0046777: protein autophosphorylation1.45E-02
121GO:0008219: cell death1.49E-02
122GO:0045454: cell redox homeostasis1.63E-02
123GO:0010119: regulation of stomatal movement1.65E-02
124GO:0006886: intracellular protein transport1.68E-02
125GO:0009853: photorespiration1.76E-02
126GO:0009867: jasmonic acid mediated signaling pathway1.76E-02
127GO:0006631: fatty acid metabolic process1.99E-02
128GO:0006887: exocytosis1.99E-02
129GO:0008283: cell proliferation2.10E-02
130GO:0008152: metabolic process2.22E-02
131GO:0009965: leaf morphogenesis2.29E-02
132GO:0006855: drug transmembrane transport2.35E-02
133GO:0006486: protein glycosylation2.60E-02
134GO:0051603: proteolysis involved in cellular protein catabolic process2.67E-02
135GO:0010224: response to UV-B2.67E-02
136GO:0009909: regulation of flower development2.80E-02
137GO:0018105: peptidyl-serine phosphorylation3.42E-02
138GO:0009555: pollen development3.56E-02
139GO:0009611: response to wounding3.64E-02
140GO:0009845: seed germination4.15E-02
141GO:0007275: multicellular organism development4.19E-02
142GO:0009790: embryo development4.38E-02
143GO:0040008: regulation of growth4.77E-02
144GO:0010150: leaf senescence4.93E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:0004298: threonine-type endopeptidase activity1.73E-07
4GO:0008233: peptidase activity3.37E-05
5GO:0051082: unfolded protein binding4.02E-05
6GO:0080042: ADP-glucose pyrophosphohydrolase activity9.50E-05
7GO:0004048: anthranilate phosphoribosyltransferase activity9.50E-05
8GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity9.50E-05
9GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity9.50E-05
10GO:0017110: nucleoside-diphosphatase activity2.24E-04
11GO:0019172: glyoxalase III activity2.24E-04
12GO:0004338: glucan exo-1,3-beta-glucosidase activity2.24E-04
13GO:0004450: isocitrate dehydrogenase (NADP+) activity2.24E-04
14GO:0080041: ADP-ribose pyrophosphohydrolase activity2.24E-04
15GO:0051287: NAD binding2.69E-04
16GO:0016531: copper chaperone activity3.73E-04
17GO:0004148: dihydrolipoyl dehydrogenase activity3.73E-04
18GO:0016165: linoleate 13S-lipoxygenase activity3.73E-04
19GO:0005093: Rab GDP-dissociation inhibitor activity3.73E-04
20GO:0005507: copper ion binding5.10E-04
21GO:0004449: isocitrate dehydrogenase (NAD+) activity5.37E-04
22GO:0010178: IAA-amino acid conjugate hydrolase activity5.37E-04
23GO:0043495: protein anchor7.14E-04
24GO:0004345: glucose-6-phosphate dehydrogenase activity7.14E-04
25GO:0047631: ADP-ribose diphosphatase activity9.02E-04
26GO:0008237: metallopeptidase activity9.27E-04
27GO:1990714: hydroxyproline O-galactosyltransferase activity1.10E-03
28GO:0000210: NAD+ diphosphatase activity1.10E-03
29GO:0008519: ammonium transmembrane transporter activity1.10E-03
30GO:0030976: thiamine pyrophosphate binding1.10E-03
31GO:0102391: decanoate--CoA ligase activity1.31E-03
32GO:0004012: phospholipid-translocating ATPase activity1.31E-03
33GO:0016831: carboxy-lyase activity1.54E-03
34GO:0008235: metalloexopeptidase activity1.54E-03
35GO:0008121: ubiquinol-cytochrome-c reductase activity1.54E-03
36GO:0050897: cobalt ion binding1.54E-03
37GO:0004467: long-chain fatty acid-CoA ligase activity1.54E-03
38GO:0000287: magnesium ion binding1.62E-03
39GO:0005524: ATP binding1.78E-03
40GO:0005544: calcium-dependent phospholipid binding1.78E-03
41GO:0015112: nitrate transmembrane transporter activity2.56E-03
42GO:0005516: calmodulin binding2.68E-03
43GO:0004177: aminopeptidase activity3.14E-03
44GO:0008378: galactosyltransferase activity3.44E-03
45GO:0046872: metal ion binding3.67E-03
46GO:0005509: calcium ion binding3.72E-03
47GO:0005388: calcium-transporting ATPase activity3.76E-03
48GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.76E-03
49GO:0031072: heat shock protein binding3.76E-03
50GO:0008266: poly(U) RNA binding4.08E-03
51GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.08E-03
52GO:0030553: cGMP binding4.41E-03
53GO:0003712: transcription cofactor activity4.41E-03
54GO:0004190: aspartic-type endopeptidase activity4.41E-03
55GO:0030552: cAMP binding4.41E-03
56GO:0016758: transferase activity, transferring hexosyl groups4.99E-03
57GO:0005528: FK506 binding5.10E-03
58GO:0043424: protein histidine kinase binding5.46E-03
59GO:0005216: ion channel activity5.46E-03
60GO:0004540: ribonuclease activity5.83E-03
61GO:0008810: cellulase activity6.58E-03
62GO:0003756: protein disulfide isomerase activity6.98E-03
63GO:0030551: cyclic nucleotide binding7.79E-03
64GO:0005249: voltage-gated potassium channel activity7.79E-03
65GO:0046933: proton-transporting ATP synthase activity, rotational mechanism8.21E-03
66GO:0010181: FMN binding8.63E-03
67GO:0008137: NADH dehydrogenase (ubiquinone) activity9.51E-03
68GO:0050660: flavin adenine dinucleotide binding1.27E-02
69GO:0009931: calcium-dependent protein serine/threonine kinase activity1.33E-02
70GO:0030247: polysaccharide binding1.38E-02
71GO:0004683: calmodulin-dependent protein kinase activity1.38E-02
72GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.49E-02
73GO:0015238: drug transmembrane transporter activity1.54E-02
74GO:0005096: GTPase activator activity1.54E-02
75GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.65E-02
76GO:0000149: SNARE binding1.87E-02
77GO:0050661: NADP binding1.93E-02
78GO:0042393: histone binding1.93E-02
79GO:0005484: SNAP receptor activity2.10E-02
80GO:0009055: electron carrier activity2.15E-02
81GO:0043621: protein self-association2.23E-02
82GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.35E-02
83GO:0031625: ubiquitin protein ligase binding2.80E-02
84GO:0080044: quercetin 7-O-glucosyltransferase activity3.14E-02
85GO:0080043: quercetin 3-O-glucosyltransferase activity3.14E-02
86GO:0003779: actin binding3.27E-02
87GO:0030170: pyridoxal phosphate binding4.23E-02
88GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.69E-02
89GO:0015297: antiporter activity4.77E-02
90GO:0030246: carbohydrate binding4.77E-02
RankGO TermAdjusted P value
1GO:0005839: proteasome core complex1.73E-07
2GO:0005774: vacuolar membrane5.33E-07
3GO:0019773: proteasome core complex, alpha-subunit complex6.83E-07
4GO:0005829: cytosol1.00E-06
5GO:0005886: plasma membrane1.63E-06
6GO:0005773: vacuole4.03E-06
7GO:0005758: mitochondrial intermembrane space8.58E-06
8GO:0000502: proteasome complex2.00E-05
9GO:0005747: mitochondrial respiratory chain complex I2.99E-05
10GO:0009506: plasmodesma4.16E-05
11GO:0005739: mitochondrion4.75E-05
12GO:0005788: endoplasmic reticulum lumen7.50E-05
13GO:0009507: chloroplast1.93E-04
14GO:0005750: mitochondrial respiratory chain complex III2.13E-04
15GO:0046861: glyoxysomal membrane3.73E-04
16GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)7.14E-04
17GO:0048046: apoplast7.45E-04
18GO:0005759: mitochondrial matrix8.60E-04
19GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.78E-03
20GO:0045273: respiratory chain complex II1.78E-03
21GO:0009514: glyoxysome2.03E-03
22GO:0005740: mitochondrial envelope2.85E-03
23GO:0005753: mitochondrial proton-transporting ATP synthase complex4.41E-03
24GO:0045271: respiratory chain complex I5.46E-03
25GO:0070469: respiratory chain5.46E-03
26GO:0015935: small ribosomal subunit5.83E-03
27GO:0005741: mitochondrial outer membrane5.83E-03
28GO:0015629: actin cytoskeleton6.58E-03
29GO:0022626: cytosolic ribosome6.96E-03
30GO:0009504: cell plate9.06E-03
31GO:0005730: nucleolus9.34E-03
32GO:0005802: trans-Golgi network1.34E-02
33GO:0000151: ubiquitin ligase complex1.49E-02
34GO:0015934: large ribosomal subunit1.65E-02
35GO:0005819: spindle1.87E-02
36GO:0031201: SNARE complex1.99E-02
37GO:0031966: mitochondrial membrane2.47E-02
38GO:0005887: integral component of plasma membrane2.73E-02
39GO:0005783: endoplasmic reticulum2.75E-02
40GO:0005618: cell wall3.32E-02
41GO:0005623: cell4.00E-02
42GO:0009524: phragmoplast4.07E-02
43GO:0009705: plant-type vacuole membrane4.93E-02
Gene type



Gene DE type